CF832525

Overview
NameCF832525
Unique NameCF832525
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length838
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig10082 contig Csv1_Contig10082:640..1477. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF832525 vs. ExPASy Swiss-Prot
Match: PSMR_METAC (Proteasome-activating nucleotidase OS=Methanosarcina acetivorans GN=pan PE=3 SV=2)

HSP 1 Score: 201.83 bits (512), Expect = 3.889e-51
Identity = 94/185 (50.81%), Postives = 138/185 (74.59%), Query Frame = -1
Query:  284 ANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAIRAERDYVIHEDFMKAVRKLNEA 838
            A F++VV S ++ KYIG+ ++L+RE+F  AR   P IIF+DE+D+I  RR +E T ADRE+QRTLM+LL ++DGFD+   +++I ATNRPDVLDPA+LRPGR DR + +P+P  ++R +ILKIH   +   G+ID++ + K+ EG +GADL+ + TEAGM A+R ++  V  EDF++AV K++ A
Sbjct:  219 ATFIRVVGSELVQKYIGDGSKLVREIFEMARKKAPSIIFIDELDSIAARRLNETTGADREVQRTLMQLLAEMDGFDKRKNIRIIAATNRPDVLDPAILRPGRFDRLVHVPMPGIEARGKILKIHCGKMTLAGDIDFKKLAKVTEGMSGADLKAIATEAGMFAVRKDKALVEMEDFLEAVEKVSMA 403          
BLAST of CF832525 vs. ExPASy Swiss-Prot
Match: PRS8_MANSE (26S protease regulatory subunit 8 OS=Manduca sexta PE=2 SV=1)

HSP 1 Score: 201.06 bits (510), Expect = 6.633e-51
Identity = 96/180 (53.33%), Postives = 132/180 (73.33%), Query Frame = -1
Query:  293 FLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAIRAERDYVIHEDFMKAVRKL 832
            F++V  S ++ K+IGE +R++RE+F  AR+H P IIFMDEID+IG  R   G+  D E+QRT++ELLNQLDGF+    +K+IMATNR D+LDPALLRPGR+DRKIE P PNE++R++ILKIH+  +     I+   + +L  G +GA+++ VCTEAGM A+R  R +V  EDF  AV K+
Sbjct:  207 FIRVSGSELVQKFIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDPALLRPGRIDRKIEFPPPNEEARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFEMAVAKV 386          
BLAST of CF832525 vs. ExPASy Swiss-Prot
Match: PRS8_DROME (26S protease regulatory subunit 8 OS=Drosophila melanogaster GN=Pros45 PE=1 SV=2)

HSP 1 Score: 201.06 bits (510), Expect = 6.633e-51
Identity = 96/180 (53.33%), Postives = 132/180 (73.33%), Query Frame = -1
Query:  293 FLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAIRAERDYVIHEDFMKAVRKL 832
            F++V  S ++ K+IGE +R++RE+F  AR+H P IIFMDEID+IG  R   G+  D E+QRT++ELLNQLDGF+    +K+IMATNR D+LDPALLRPGR+DRKIE P PNE++R++ILKIH+  +     I+   + +L  G +GA+++ VCTEAGM A+R  R +V  EDF  AV K+
Sbjct:  210 FIRVSGSELVQKFIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDPALLRPGRIDRKIEFPPPNEEARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFEMAVAKV 389          
BLAST of CF832525 vs. ExPASy Swiss-Prot
Match: PSMR_METB6 (Proteasome-activating nucleotidase OS=Methanoregula boonei (strain 6A8) GN=pan PE=3 SV=1)

HSP 1 Score: 200.675 bits (509), Expect = 8.663e-51
Identity = 99/182 (54.40%), Postives = 128/182 (70.33%), Query Frame = -1
Query:  293 ANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAIRAERDYVIHEDFMKAVRKL 838
            A+F++VV S ++ KYIGE ARL+RE+F  A+   P IIF+DEIDA+G  R    TS DRE+QRTLM+LL  +DGF+  G VK+I ATNR D+LD ALLRPGR DR IEIPLP+E+ R+ ILK+H   +     ++   +  L EG NGADLR +C EAGM AIR ER  +  EDF+ A+ K+
Sbjct:  238 AHFMRVVGSELVQKYIGEGARLVRELFDLAKKKAPTIIFIDEIDAVGASRTEANTSGDREVQRTLMQLLAGMDGFETRGDVKIIGATNRIDILDKALLRPGRFDRIIEIPLPDEEGRLSILKVHTRTLTMEETVNLPEIAGLTEGKNGADLRAICMEAGMYAIRNERPAITREDFLSAIEKV 419          
BLAST of CF832525 vs. ExPASy Swiss-Prot
Match: PSMR_SULTO (Proteasome-activating nucleotidase OS=Sulfolobus tokodaii GN=pan PE=3 SV=2)

HSP 1 Score: 200.29 bits (508), Expect = 1.131e-50
Identity = 101/198 (51.01%), Postives = 136/198 (68.69%), Query Frame = -1
Query:  257 ANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAIRAERDYVIHEDFMKAVRKL----NEAKKLESSAHY 838
            A F++VV+S    K++GE AR++RE+F  AR   P I+F+DEIDAIG +R   GTS +REIQRTLM+LL ++DGF  L  VK+I ATNR D+LDPALLRPGR DR IE+PLPN + R EI +I+   +   G I Y+ +  + EGF+GA+++NVCTEAG  AIR  R YV   D + A+ K+    N+AK  + +  Y
Sbjct:  194 ATFIQVVASEFAQKFVGEGARIVREVFELARRKAPSIVFIDEIDAIGAKRVDMGTSGEREIQRTLMQLLAEIDGFKPLDNVKIIAATNRLDILDPALLRPGRFDRLIEVPLPNFEGRKEIFRIYLQKMKTDGNIRYDILASMTEGFSGAEIKNVCTEAGYIAIRNGRKYVNMTDLITAIEKIKAKNNKAKNTDRTEKY 391          
BLAST of CF832525 vs. ExPASy Swiss-Prot
Match: PSMR_ARCFU (Proteasome-activating nucleotidase OS=Archaeoglobus fulgidus GN=pan PE=1 SV=1)

HSP 1 Score: 200.29 bits (508), Expect = 1.131e-50
Identity = 97/182 (53.30%), Postives = 132/182 (72.53%), Query Frame = -1
Query:  293 ANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAIRAERDYVIHEDFMKAVRKL 838
            A F++VV S  + KYIGE ARL+RE+F  A++  P IIF+DE+DAI  RR +  TS DRE+QRT+M+LL +LDGFD  G VK+I ATNR D+LDPA+LRPGR DR IE+PLP  + R++I KIH   +    ++D++ + ++ EG +GAD++ +CTEAGM AIR ER  V   DF KA+ K+
Sbjct:  201 ATFIRVVGSEFVQKYIGEGARLVREVFQLAKEKAPSIIFIDELDAIAARRTNSDTSGDREVQRTMMQLLAELDGFDPRGDVKVIGATNRIDILDPAILRPGRFDRIIEVPLPTFEGRIQIFKIHTRKMKLAEDVDFKELARITEGASGADIKAICTEAGMFAIREERAKVTMLDFTKAIEKV 382          
BLAST of CF832525 vs. ExPASy Swiss-Prot
Match: PSMR_METVS (Proteasome-activating nucleotidase OS=Methanococcus vannielii (strain SB / ATCC 35089 / DSM 1224) GN=pan PE=3 SV=1)

HSP 1 Score: 199.904 bits (507), Expect = 1.478e-50
Identity = 101/201 (50.25%), Postives = 138/201 (68.66%), Query Frame = -1
Query:  242 ANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAIRAERDYVIHEDFMKAVRKL--NEAKKLESSAHYNADFG 838
            A+F++VV S ++ K+IGE A+L+R++F  A++  PCIIF+DEIDA+  +R    T  DRE+QRTLM+LL ++DGFD  G VK+I ATNRPD+LDPA+LRPGR DR IEI  P+E  R+EI KIH   +     +D   + K+AE   GAD++ VCTEAGM AIR  R+YV  +DF +A+ K+   + K  E  AH    +G
Sbjct:  208 ASFVRVVGSELVKKFIGEGAKLVRDVFKLAKEKSPCIIFIDEIDAVASKRTESLTGGDREVQRTLMQLLAEMDGFDSRGDVKIIAATNRPDILDPAILRPGRFDRIIEIAAPDEDGRLEIFKIHTDKM-NIKSVDLREIAKMAENMVGADIKAVCTEAGMFAIREGREYVTTKDFKEALLKVTGKKEKSEEGIAHLTTMYG 407          
BLAST of CF832525 vs. ExPASy Swiss-Prot
Match: PRS8_ENCCU (26S protease regulatory subunit 8 homolog OS=Encephalitozoon cuniculi GN=RPT6 PE=1 SV=1)

HSP 1 Score: 199.134 bits (505), Expect = 2.521e-50
Identity = 102/198 (51.52%), Postives = 135/198 (68.18%), Query Frame = -1
Query:  239 FLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAIRAERDYVIHEDFMKAVRKLNEAKKLESSAHYNADFGK 832
            F++V  S ++ KYIGE +RL+RE+F  AR+H P IIFMDEID+IG  R      +D E+QRT++ELLNQLDGF+    +K+IMATNR D+LDPALLR GR+DRKIE P PNE +R+EILKIH+  +     ID E +     G +GA+++ VCTEAGM A+R  R +V  EDF  AV K+     L+ +   N+D  K
Sbjct:  258 FIRVSGSELVQKYIGEGSRLVRELFIMAREHAPSIIFMDEIDSIGSTRGDSNKGSDSEVQRTMLELLNQLDGFESHNNIKVIMATNRIDILDPALLRTGRIDRKIEFPPPNESARLEILKIHSRKMNLTKGIDLETIASKMVGCSGAEVKAVCTEAGMYALRERRVHVTQEDFEMAVHKV-----LKKTGDLNSDLRK 450          
BLAST of CF832525 vs. ExPASy Swiss-Prot
Match: PRS8_RAT (26S protease regulatory subunit 8 OS=Rattus norvegicus GN=Psmc5 PE=1 SV=1)

HSP 1 Score: 198.364 bits (503), Expect = 4.300e-50
Identity = 96/180 (53.33%), Postives = 131/180 (72.78%), Query Frame = -1
Query:  293 FLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAIRAERDYVIHEDFMKAVRKL 832
            F++V  S ++ K+IGE AR++RE+F  AR+H P IIFMDEID+IG  R   G+  D E+QRT++ELLNQLDGF+    +K+IMATNR D+LD ALLRPGR+DRKIE P PNE++R++ILKIH+  +     I+   + +L  G +GA+++ VCTEAGM A+R  R +V  EDF  AV K+
Sbjct:  211 FIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGGSGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEEARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFEMAVAKV 390          
BLAST of CF832525 vs. ExPASy Swiss-Prot
Match: PRS8_PIG (26S protease regulatory subunit 8 OS=Sus scrofa GN=PSMC5 PE=2 SV=1)

HSP 1 Score: 198.364 bits (503), Expect = 4.300e-50
Identity = 96/180 (53.33%), Postives = 131/180 (72.78%), Query Frame = -1
Query:  293 FLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAIRAERDYVIHEDFMKAVRKL 832
            F++V  S ++ K+IGE AR++RE+F  AR+H P IIFMDEID+IG  R   G+  D E+QRT++ELLNQLDGF+    +K+IMATNR D+LD ALLRPGR+DRKIE P PNE++R++ILKIH+  +     I+   + +L  G +GA+++ VCTEAGM A+R  R +V  EDF  AV K+
Sbjct:  211 FIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGGSGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEEARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFEMAVAKV 390          
The following BLAST results are available for this feature:
BLAST of CF832525 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 380
Match NameE-valueIdentityDescription
PSMR_METAC3.889e-5150.81Proteasome-activating nucleotidase OS=Methanosarci... [more]
PRS8_MANSE6.633e-5153.3326S protease regulatory subunit 8 OS=Manduca sexta... [more]
PRS8_DROME6.633e-5153.3326S protease regulatory subunit 8 OS=Drosophila me... [more]
PSMR_METB68.663e-5154.40Proteasome-activating nucleotidase OS=Methanoregul... [more]
PSMR_SULTO1.131e-5051.01Proteasome-activating nucleotidase OS=Sulfolobus t... [more]
PSMR_ARCFU1.131e-5053.30Proteasome-activating nucleotidase OS=Archaeoglobu... [more]
PSMR_METVS1.478e-5050.25Proteasome-activating nucleotidase OS=Methanococcu... [more]
PRS8_ENCCU2.521e-5051.5226S protease regulatory subunit 8 homolog OS=Encep... [more]
PRS8_RAT4.300e-5053.3326S protease regulatory subunit 8 OS=Rattus norveg... [more]
PRS8_PIG4.300e-5053.3326S protease regulatory subunit 8 OS=Sus scrofa GN... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_02A01_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa02A01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832525 ID=CF832525; Name=CF832525; organism=Citrus sinensis; type=EST; length=838bp
TTTTTTTTTTTTTTTTTGAGAATCGGTGGAAATCACTGAAACCATCAATA
CATTAAAGATGTGCAACAATTTCTGACGTAAATGATTGTTATAATATATA
GAGCATTCCATCGCTCAAAGAACCACTAACTTCACAAATTAAAGCAAGAT
GTTTTAACAAAAATATGAAAACAATTACATCTGAAAAATAACCGCACTGC
CTCAAGATCCTTGGCTCTTTTCCTAAATGTTTTTACTCTTTTCCAAAATC
AGCATTGTAGTGAGCACTTGATTCAAGTTTCTTTGCCTCGTTCAGTTTCC
GGACAGCCTTCATAAAATCTTCGTGGATGACATAATCACGTTCAGCACGG
ATTGCCGACATTCCAGCCTCGGTGCAAACATTTCGGAGATCAGCCCCATT
AAAGCCCTCTGCAAGCTTCACAACAGCCTCATAATCAATCTCACCATGCT
TAGCAATGCCAGCAGCATGAATTTTAAGAATTTCCATTCTTGACTGCTCA
TTTGGCAATGGAATCTCAATTTTCCTATCCAGTCGCCCTGGACGAAGAAG
TGCAGGGTCAAGGACATCAGGTCTGTTAGTGGCCATTATCATTTTAACCT
TCCCAAGCTGATCAAATCCATCAAGCTGATTAAGTAACTCCATCAGTGTC
CTTTGAATTTCACGATCTGCACTGGTTCCTTCACTAAAACGGCGTCCACC
GATGGCATCAATTTCATCCATAAAAATGATGCAGGGTTGATGATCACGTG
CATATCCAAACATCTCTCTTATCAACCTTGCACTTTCCCCAATGTACTTA
TCAATAATGGCACTTGAAACCACCTTCAGAAAATTTGC
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