CF832535
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF832535 vs. ExPASy Swiss-Prot
Match: RRF_ESCF3 (Ribosome-recycling factor OS=Escherichia fergusonii (strain ATCC 35469 / DSM 13698 / CDC 0568-73) GN=frr PE=3 SV=1) HSP 1 Score: 140.198 bits (352), Expect = 8.923e-33 Identity = 68/142 (47.89%), Postives = 103/142 (72.54%), Query Frame = -2 Query: 225 SNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKIDS 650 ++P++LD I VEYYG+P L+ +A + DS +L I +D+S ++EKAI++SDLG+ PN+ G IR+ LP LT ERRK+L+K+V +AE+ +VAVRN+RRDA + L K+K++SED+ + D+QKLTD +KKI++ Sbjct: 32 ASPSLLDGIVVEYYGTPTPLRQLASVTVEDSRTLKINVFDRSMSPAVEKAIMASDLGLNPNSAGSDIRVPLPPLTEERRKDLTKIVRGEAEQARVAVRNVRRDANDKVKALLKDKEISEDDDRRSQDDVQKLTDAAIKKIEA 173
BLAST of CF832535 vs. ExPASy Swiss-Prot
Match: RRF_ECOUT (Ribosome-recycling factor OS=Escherichia coli (strain UTI89 / UPEC) GN=frr PE=3 SV=1) HSP 1 Score: 140.198 bits (352), Expect = 8.923e-33 Identity = 68/142 (47.89%), Postives = 103/142 (72.54%), Query Frame = -2 Query: 225 SNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKIDS 650 ++P++LD I VEYYG+P L+ +A + DS +L I +D+S ++EKAI++SDLG+ PN+ G IR+ LP LT ERRK+L+K+V +AE+ +VAVRN+RRDA + L K+K++SED+ + D+QKLTD +KKI++ Sbjct: 32 ASPSLLDGIVVEYYGTPTPLRQLASVTVEDSRTLKINVFDRSMSPAVEKAIMASDLGLNPNSAGSDIRVPLPPLTEERRKDLTKIVRGEAEQARVAVRNVRRDANDKVKALLKDKEISEDDDRRSQDDVQKLTDAAIKKIEA 173
BLAST of CF832535 vs. ExPASy Swiss-Prot
Match: RRF_ECOSM (Ribosome-recycling factor OS=Escherichia coli (strain SMS-3-5 / SECEC) GN=frr PE=3 SV=1) HSP 1 Score: 140.198 bits (352), Expect = 8.923e-33 Identity = 68/142 (47.89%), Postives = 103/142 (72.54%), Query Frame = -2 Query: 225 SNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKIDS 650 ++P++LD I VEYYG+P L+ +A + DS +L I +D+S ++EKAI++SDLG+ PN+ G IR+ LP LT ERRK+L+K+V +AE+ +VAVRN+RRDA + L K+K++SED+ + D+QKLTD +KKI++ Sbjct: 32 ASPSLLDGIVVEYYGTPTPLRQLASVTVEDSRTLKINVFDRSMSPAVEKAIMASDLGLNPNSAGSDIRVPLPPLTEERRKDLTKIVRGEAEQARVAVRNVRRDANDKVKALLKDKEISEDDDRRSQDDVQKLTDAAIKKIEA 173
BLAST of CF832535 vs. ExPASy Swiss-Prot
Match: RRF_ECOSE (Ribosome-recycling factor OS=Escherichia coli (strain SE11) GN=frr PE=3 SV=1) HSP 1 Score: 140.198 bits (352), Expect = 8.923e-33 Identity = 68/142 (47.89%), Postives = 103/142 (72.54%), Query Frame = -2 Query: 225 SNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKIDS 650 ++P++LD I VEYYG+P L+ +A + DS +L I +D+S ++EKAI++SDLG+ PN+ G IR+ LP LT ERRK+L+K+V +AE+ +VAVRN+RRDA + L K+K++SED+ + D+QKLTD +KKI++ Sbjct: 32 ASPSLLDGIVVEYYGTPTPLRQLASVTVEDSRTLKINVFDRSMSPAVEKAIMASDLGLNPNSAGSDIRVPLPPLTEERRKDLTKIVRGEAEQARVAVRNVRRDANDKVKALLKDKEISEDDDRRSQDDVQKLTDAAIKKIEA 173
BLAST of CF832535 vs. ExPASy Swiss-Prot
Match: RRF_ECOLU (Ribosome-recycling factor OS=Escherichia coli O17:K52:H18 (strain UMN026 / ExPEC) GN=frr PE=3 SV=1) HSP 1 Score: 140.198 bits (352), Expect = 8.923e-33 Identity = 68/142 (47.89%), Postives = 103/142 (72.54%), Query Frame = -2 Query: 225 SNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKIDS 650 ++P++LD I VEYYG+P L+ +A + DS +L I +D+S ++EKAI++SDLG+ PN+ G IR+ LP LT ERRK+L+K+V +AE+ +VAVRN+RRDA + L K+K++SED+ + D+QKLTD +KKI++ Sbjct: 32 ASPSLLDGIVVEYYGTPTPLRQLASVTVEDSRTLKINVFDRSMSPAVEKAIMASDLGLNPNSAGSDIRVPLPPLTEERRKDLTKIVRGEAEQARVAVRNVRRDANDKVKALLKDKEISEDDDRRSQDDVQKLTDAAIKKIEA 173
BLAST of CF832535 vs. ExPASy Swiss-Prot
Match: RRF_ECOLI (Ribosome-recycling factor OS=Escherichia coli (strain K12) GN=frr PE=1 SV=1) HSP 1 Score: 140.198 bits (352), Expect = 8.923e-33 Identity = 68/142 (47.89%), Postives = 103/142 (72.54%), Query Frame = -2 Query: 225 SNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKIDS 650 ++P++LD I VEYYG+P L+ +A + DS +L I +D+S ++EKAI++SDLG+ PN+ G IR+ LP LT ERRK+L+K+V +AE+ +VAVRN+RRDA + L K+K++SED+ + D+QKLTD +KKI++ Sbjct: 32 ASPSLLDGIVVEYYGTPTPLRQLASVTVEDSRTLKINVFDRSMSPAVEKAIMASDLGLNPNSAGSDIRVPLPPLTEERRKDLTKIVRGEAEQARVAVRNVRRDANDKVKALLKDKEISEDDDRRSQDDVQKLTDAAIKKIEA 173
BLAST of CF832535 vs. ExPASy Swiss-Prot
Match: RRF_ECOLC (Ribosome-recycling factor OS=Escherichia coli (strain ATCC 8739 / DSM 1576 / Crooks) GN=frr PE=3 SV=1) HSP 1 Score: 140.198 bits (352), Expect = 8.923e-33 Identity = 68/142 (47.89%), Postives = 103/142 (72.54%), Query Frame = -2 Query: 225 SNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKIDS 650 ++P++LD I VEYYG+P L+ +A + DS +L I +D+S ++EKAI++SDLG+ PN+ G IR+ LP LT ERRK+L+K+V +AE+ +VAVRN+RRDA + L K+K++SED+ + D+QKLTD +KKI++ Sbjct: 32 ASPSLLDGIVVEYYGTPTPLRQLASVTVEDSRTLKINVFDRSMSPAVEKAIMASDLGLNPNSAGSDIRVPLPPLTEERRKDLTKIVRGEAEQARVAVRNVRRDANDKVKALLKDKEISEDDDRRSQDDVQKLTDAAIKKIEA 173
BLAST of CF832535 vs. ExPASy Swiss-Prot
Match: RRF_ECOL6 (Ribosome-recycling factor OS=Escherichia coli O6 GN=frr PE=3 SV=1) HSP 1 Score: 140.198 bits (352), Expect = 8.923e-33 Identity = 68/142 (47.89%), Postives = 103/142 (72.54%), Query Frame = -2 Query: 225 SNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKIDS 650 ++P++LD I VEYYG+P L+ +A + DS +L I +D+S ++EKAI++SDLG+ PN+ G IR+ LP LT ERRK+L+K+V +AE+ +VAVRN+RRDA + L K+K++SED+ + D+QKLTD +KKI++ Sbjct: 32 ASPSLLDGIVVEYYGTPTPLRQLASVTVEDSRTLKINVFDRSMSPAVEKAIMASDLGLNPNSAGSDIRVPLPPLTEERRKDLTKIVRGEAEQARVAVRNVRRDANDKVKALLKDKEISEDDDRRSQDDVQKLTDAAIKKIEA 173
BLAST of CF832535 vs. ExPASy Swiss-Prot
Match: RRF_ECOL5 (Ribosome-recycling factor OS=Escherichia coli O6:K15:H31 (strain 536 / UPEC) GN=frr PE=3 SV=1) HSP 1 Score: 140.198 bits (352), Expect = 8.923e-33 Identity = 68/142 (47.89%), Postives = 103/142 (72.54%), Query Frame = -2 Query: 225 SNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKIDS 650 ++P++LD I VEYYG+P L+ +A + DS +L I +D+S ++EKAI++SDLG+ PN+ G IR+ LP LT ERRK+L+K+V +AE+ +VAVRN+RRDA + L K+K++SED+ + D+QKLTD +KKI++ Sbjct: 32 ASPSLLDGIVVEYYGTPTPLRQLASVTVEDSRTLKINVFDRSMSPAVEKAIMASDLGLNPNSAGSDIRVPLPPLTEERRKDLTKIVRGEAEQARVAVRNVRRDANDKVKALLKDKEISEDDDRRSQDDVQKLTDAAIKKIEA 173
BLAST of CF832535 vs. ExPASy Swiss-Prot
Match: RRF_ECOHS (Ribosome-recycling factor OS=Escherichia coli O9:H4 (strain HS) GN=frr PE=3 SV=1) HSP 1 Score: 140.198 bits (352), Expect = 8.923e-33 Identity = 68/142 (47.89%), Postives = 103/142 (72.54%), Query Frame = -2 Query: 225 SNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKIDS 650 ++P++LD I VEYYG+P L+ +A + DS +L I +D+S ++EKAI++SDLG+ PN+ G IR+ LP LT ERRK+L+K+V +AE+ +VAVRN+RRDA + L K+K++SED+ + D+QKLTD +KKI++ Sbjct: 32 ASPSLLDGIVVEYYGTPTPLRQLASVTVEDSRTLKINVFDRSMSPAVEKAIMASDLGLNPNSAGSDIRVPLPPLTEERRKDLTKIVRGEAEQARVAVRNVRRDANDKVKALLKDKEISEDDDRRSQDDVQKLTDAAIKKIEA 173 The following BLAST results are available for this feature:
BLAST of CF832535 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CF832535 ID=CF832535; Name=CF832535; organism=Citrus sinensis; type=EST; length=651bpback to top |