CF832536
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF832536 vs. ExPASy Swiss-Prot
Match: RRF_BACC0 (Ribosome-recycling factor OS=Bacillus cereus (strain AH820) GN=frr PE=3 SV=1) HSP 1 Score: 154.451 bits (389), Expect = 4.572e-37 Identity = 72/141 (51.06%), Postives = 105/141 (74.47%), Query Frame = 3 Query: 15 MLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKIDSIYK 437 +LDK++V+YYG+P + +A I P++ L+IQPYDK+S+ IEKAI+ +DLG+ P+NDG VIR+ P LT ERR++L KVV K AEE KVAVRN+RRD +KL+K +++ED+++ + D+QK TD+Y+ K+D I K Sbjct: 36 VLDKVQVDYYGAPTPVVQLANITVPEARLLVIQPYDKTSIGDIEKAILKADLGLNPSNDGTVIRIAFPALTEERRRDLVKVVKKYAEEAKVAVRNVRRDGNDDLKKLEKAGEITEDDLRGYTEDIQKETDKYIAKVDEIAK 176
BLAST of CF832536 vs. ExPASy Swiss-Prot
Match: RRF_BACAN (Ribosome-recycling factor OS=Bacillus anthracis GN=frr PE=3 SV=1) HSP 1 Score: 154.451 bits (389), Expect = 4.572e-37 Identity = 72/141 (51.06%), Postives = 105/141 (74.47%), Query Frame = 3 Query: 15 MLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKIDSIYK 437 +LDK++V+YYG+P + +A I P++ L+IQPYDK+S+ IEKAI+ +DLG+ P+NDG VIR+ P LT ERR++L KVV K AEE KVAVRN+RRD +KL+K +++ED+++ + D+QK TD+Y+ K+D I K Sbjct: 36 VLDKVQVDYYGAPTPVVQLANITVPEARLLVIQPYDKTSIGDIEKAILKADLGLNPSNDGTVIRIAFPALTEERRRDLVKVVKKYAEEAKVAVRNVRRDGNDDLKKLEKAGEITEDDLRGYTEDIQKETDKYIAKVDEIAK 176
BLAST of CF832536 vs. ExPASy Swiss-Prot
Match: RRF_BACAH (Ribosome-recycling factor OS=Bacillus thuringiensis (strain Al Hakam) GN=frr PE=3 SV=1) HSP 1 Score: 154.451 bits (389), Expect = 4.572e-37 Identity = 72/141 (51.06%), Postives = 105/141 (74.47%), Query Frame = 3 Query: 15 MLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKIDSIYK 437 +LDK++V+YYG+P + +A I P++ L+IQPYDK+S+ IEKAI+ +DLG+ P+NDG VIR+ P LT ERR++L KVV K AEE KVAVRN+RRD +KL+K +++ED+++ + D+QK TD+Y+ K+D I K Sbjct: 36 VLDKVQVDYYGAPTPVVQLANITVPEARLLVIQPYDKTSIGDIEKAILKADLGLNPSNDGTVIRIAFPALTEERRRDLVKVVKKYAEEAKVAVRNVRRDGNDDLKKLEKAGEITEDDLRGYTEDIQKETDKYIAKVDEIAK 176
BLAST of CF832536 vs. ExPASy Swiss-Prot
Match: RRF_BACAC (Ribosome-recycling factor OS=Bacillus anthracis (strain CDC 684 / NRRL 3495) GN=frr PE=3 SV=1) HSP 1 Score: 154.451 bits (389), Expect = 4.572e-37 Identity = 72/141 (51.06%), Postives = 105/141 (74.47%), Query Frame = 3 Query: 15 MLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKIDSIYK 437 +LDK++V+YYG+P + +A I P++ L+IQPYDK+S+ IEKAI+ +DLG+ P+NDG VIR+ P LT ERR++L KVV K AEE KVAVRN+RRD +KL+K +++ED+++ + D+QK TD+Y+ K+D I K Sbjct: 36 VLDKVQVDYYGAPTPVVQLANITVPEARLLVIQPYDKTSIGDIEKAILKADLGLNPSNDGTVIRIAFPALTEERRRDLVKVVKKYAEEAKVAVRNVRRDGNDDLKKLEKAGEITEDDLRGYTEDIQKETDKYIAKVDEIAK 176
BLAST of CF832536 vs. ExPASy Swiss-Prot
Match: RRF_BACAA (Ribosome-recycling factor OS=Bacillus anthracis (strain A0248) GN=frr PE=3 SV=1) HSP 1 Score: 154.451 bits (389), Expect = 4.572e-37 Identity = 72/141 (51.06%), Postives = 105/141 (74.47%), Query Frame = 3 Query: 15 MLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKIDSIYK 437 +LDK++V+YYG+P + +A I P++ L+IQPYDK+S+ IEKAI+ +DLG+ P+NDG VIR+ P LT ERR++L KVV K AEE KVAVRN+RRD +KL+K +++ED+++ + D+QK TD+Y+ K+D I K Sbjct: 36 VLDKVQVDYYGAPTPVVQLANITVPEARLLVIQPYDKTSIGDIEKAILKADLGLNPSNDGTVIRIAFPALTEERRRDLVKVVKKYAEEAKVAVRNVRRDGNDDLKKLEKAGEITEDDLRGYTEDIQKETDKYIAKVDEIAK 176
BLAST of CF832536 vs. ExPASy Swiss-Prot
Match: RRF_SYNPW (Ribosome-recycling factor OS=Synechococcus sp. (strain WH7803) GN=frr PE=3 SV=1) HSP 1 Score: 154.066 bits (388), Expect = 5.972e-37 Identity = 73/141 (51.77%), Postives = 104/141 (73.76%), Query Frame = 3 Query: 3 SNPVMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKID 425 +N +LD+I VEYYG+ LKS+A ++TPDS ++ IQP+D S+L IEKAI S+LG TPNNDG+VIR+ +P LT ERRKE K+ +K AEEGKVA+RN+RRDA+ +K +KE + SED +D +QK D+++ +++ Sbjct: 29 ANSSLLDRISVEYYGAETPLKSLATLSTPDSQTIQIQPFDISALALIEKAIAMSELGFTPNNDGKVIRINVPPLTEERRKEFCKLASKYAEEGKVALRNLRRDAIDKIKKQEKEGEFSEDQSRDAQDSVQKTLDKFIAEVE 169
BLAST of CF832536 vs. ExPASy Swiss-Prot
Match: RRF_LAWIP (Ribosome-recycling factor OS=Lawsonia intracellularis (strain PHE/MN1-00) GN=frr PE=3 SV=1) HSP 1 Score: 154.066 bits (388), Expect = 5.972e-37 Identity = 69/138 (50.00%), Postives = 106/138 (76.81%), Query Frame = 3 Query: 15 MLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKIDS 428 ++D I+V+YYG+P + +A I PDSSS+ IQP+DK++ IEKAI+ S+LG+TP NDG++IR+TLP LT +RRK+L K+ K E+ K+A+RNIRRDA + ++L+K K +SED +K + D+QK+TD Y+K++++ Sbjct: 39 IVDTIKVDYYGTPTPINQLASIAIPDSSSITIQPWDKTAFNPIEKAILKSELGLTPINDGKIIRITLPPLTEDRRKDLVKLARKYGEDTKIAIRNIRRDANEQLKRLEKNKFISEDELKGFTEDIQKMTDNYIKEVET 176
BLAST of CF832536 vs. ExPASy Swiss-Prot
Match: RRF_LACLM (Ribosome-recycling factor OS=Lactococcus lactis subsp. cremoris (strain MG1363) GN=frr PE=3 SV=1) HSP 1 Score: 154.066 bits (388), Expect = 5.972e-37 Identity = 71/143 (49.65%), Postives = 105/143 (73.43%), Query Frame = 3 Query: 3 SNPVMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKIDSI 431 +N +LD+++V YYG+P L +A I P++ L++ P+DKS LK IEKA+ SDLG+TP NDG VIRL +P LT ERR+EL K + K E KVA+RNIRRDA+ +K +K K+++ED++KDL +++QK+TD+ +K+ D + Sbjct: 32 ANASLLDRVQVVYYGAPTPLNQLASITIPEARVLMVTPFDKSILKDIEKALYESDLGITPANDGSVIRLVIPMLTEERRRELVKEMGKYIESAKVAIRNIRRDAMDTAKKSEKAKEITEDDLKDLENEIQKVTDDAVKEADRL 174
BLAST of CF832536 vs. ExPASy Swiss-Prot
Match: RRF_CLOD6 (Ribosome-recycling factor OS=Clostridium difficile (strain 630) GN=frr PE=3 SV=1) HSP 1 Score: 154.066 bits (388), Expect = 5.972e-37 Identity = 73/143 (51.05%), Postives = 107/143 (74.83%), Query Frame = 3 Query: 3 SNPVMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKIDSI 431 +N MLDKI V+YYG+P + I I+ P+ L+I P+DKS++ IEKAI +SDLG+ P+NDGEVIRL++P LT ERRKEL+K +K AEE KV +RN RRDA + +K++K +L+ED +K ++QK+TD+++K+ID++ Sbjct: 32 ANAQMLDKIRVDYYGTPTPINQIGAISVPEPRILMISPWDKSAMHEIEKAIANSDLGLNPSNDGEVIRLSVPALTEERRKELAKKASKAAEEFKVRIRNERRDANEKIKKMEKGGELTEDELKKAQDEVQKMTDKFIKEIDTL 174
BLAST of CF832536 vs. ExPASy Swiss-Prot
Match: RRF_CLOBH (Ribosome-recycling factor OS=Clostridium botulinum (strain Hall / ATCC 3502 / NCTC 13319 / Type A) GN=frr PE=3 SV=1) HSP 1 Score: 154.066 bits (388), Expect = 5.972e-37 Identity = 76/143 (53.15%), Postives = 103/143 (72.03%), Query Frame = 3 Query: 3 SNPVMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKIDSI 431 +NP MLD+IE EYYGS L + I+ P++ LLIQP+DK +L +IEKAI+ SDLG+ P+NDG VIRL +P+LT E RK + K V K EE KVA+R+IRRD + L+K+ +SED++K D+QK TD+Y+K+IDSI Sbjct: 32 ANPAMLDRIEAEYYGSMTPLNQLGNISVPEARVLLIQPWDKGALSAIEKAILKSDLGLNPSNDGTVIRLVIPELTEETRKNIVKTVKKTGEEAKVAIRSIRRDCNDDVKNLKKD-DVSEDDIKKAEDDIQKKTDKYIKEIDSI 173 The following BLAST results are available for this feature:
BLAST of CF832536 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CF832536 ID=CF832536; Name=CF832536; organism=Citrus sinensis; type=EST; length=651bpback to top |