CF832536
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF832536 vs. ExPASy Swiss-Prot
Match: RRF_STRP4 (Ribosome-recycling factor OS=Streptococcus pneumoniae serotype 19F (strain G54) GN=frr PE=3 SV=1) HSP 1 Score: 151.369 bits (381), Expect = 3.871e-36 Identity = 74/143 (51.75%), Postives = 102/143 (71.33%), Query Frame = 3 Query: 3 SNPVMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKIDSI 431 +N +LD++ VEYYG L IA I P++ LL+ P+DKSSLK IE+A+ +SDLG+TP NDG VIRL +P LT E R++L+K V K E KVAVRNIRRDA+ +K +K K+++ED +K L D+QK+TD+ +K ID + Sbjct: 32 ANASLLDRVHVEYYGVETPLNQIASITIPEARVLLVTPFDKSSLKDIERALNASDLGITPANDGSVIRLVIPALTEETRRDLAKEVKKVGENAKVAVRNIRRDAMDEAKKQEKAKEITEDELKTLEKDIQKVTDDAVKHIDDM 174
BLAST of CF832536 vs. ExPASy Swiss-Prot
Match: RRF_PROMA (Ribosome-recycling factor OS=Prochlorococcus marinus GN=frr PE=3 SV=1) HSP 1 Score: 151.369 bits (381), Expect = 3.871e-36 Identity = 71/141 (50.35%), Postives = 104/141 (73.76%), Query Frame = 3 Query: 3 SNPVMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKID 425 +N +LD++ VEYYG+ LKS+A I+TPDS +L IQP+D SL IEKAI SDLG TPNNDG++IR+ +P LT ERRK+ K+ +K AEE K+++RNIRRDA++ + +K+ + SED +D +QK+T++Y+ +I+ Sbjct: 29 ANTSLLDRLTVEYYGADTPLKSLATISTPDSQTLAIQPFDLGSLGLIEKAISISDLGFTPNNDGKIIRINIPPLTEERRKQFCKLASKYAEEAKISLRNIRRDAIEKIKGSEKDGEFSEDQSRDQQDSIQKITNKYINEIE 169
BLAST of CF832536 vs. ExPASy Swiss-Prot
Match: RRF_DESVV (Ribosome-recycling factor OS=Desulfovibrio vulgaris subsp. vulgaris (strain DP4) GN=frr PE=3 SV=1) HSP 1 Score: 151.369 bits (381), Expect = 3.871e-36 Identity = 69/137 (50.36%), Postives = 101/137 (73.72%), Query Frame = 3 Query: 15 MLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKID 425 ++D I+V+YYG+P + +A + PDS + IQP+D+++ IEKAI+ SDLG+ P NDG++IR+ +P LT ERRK+L K+ K AEE KVAVRN+RRDA + +KL+K K+LSED+++ D+QKLTD ++ K D Sbjct: 37 LVDGIKVDYYGTPTPISQVASVAVPDSRCITIQPWDRNAFSLIEKAILKSDLGLNPVNDGKIIRINIPPLTEERRKDLGKMARKYAEEAKVAVRNVRRDANEQLKKLEKNKELSEDDLRKAQEDVQKLTDRFVAKTD 173
BLAST of CF832536 vs. ExPASy Swiss-Prot
Match: RRF_DESVH (Ribosome-recycling factor OS=Desulfovibrio vulgaris (strain Hildenborough / ATCC 29579 / NCIMB 8303) GN=frr PE=3 SV=1) HSP 1 Score: 151.369 bits (381), Expect = 3.871e-36 Identity = 69/137 (50.36%), Postives = 101/137 (73.72%), Query Frame = 3 Query: 15 MLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKID 425 ++D I+V+YYG+P + +A + PDS + IQP+D+++ IEKAI+ SDLG+ P NDG++IR+ +P LT ERRK+L K+ K AEE KVAVRN+RRDA + +KL+K K+LSED+++ D+QKLTD ++ K D Sbjct: 37 LVDGIKVDYYGTPTPISQVASVAVPDSRCITIQPWDRNAFSLIEKAILKSDLGLNPVNDGKIIRINIPPLTEERRKDLGKMARKYAEEAKVAVRNVRRDANEQLKKLEKNKELSEDDLRKAQEDVQKLTDRFVAKTD 173
BLAST of CF832536 vs. ExPASy Swiss-Prot
Match: RRF_PROM2 (Ribosome-recycling factor OS=Prochlorococcus marinus (strain MIT 9215) GN=frr PE=3 SV=1) HSP 1 Score: 150.984 bits (380), Expect = 5.055e-36 Identity = 73/142 (51.41%), Postives = 108/142 (76.06%), Query Frame = 3 Query: 3 SNPVMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKIDS 428 +N +LD++ V+YYG+ +KS+A I+T DS ++ IQP+D S L++IEK+I SDLG+TPNNDG+VIR+ +P LT ERRKE K+ +K AEEGKVA+RNIRRDA+ +K +K+ +S D +D S++QK+TD+Y+ I++ Sbjct: 29 ANASLLDRVSVDYYGAETPIKSLATISTIDSQTISIQPFDISCLQAIEKSISMSDLGITPNNDGKVIRINVPPLTEERRKEFCKLASKYAEEGKVALRNIRRDAVDKEKKDEKDGLISIDESRDNQSEIQKITDKYIALIET 170
BLAST of CF832536 vs. ExPASy Swiss-Prot
Match: RRF_CLOTE (Ribosome-recycling factor OS=Clostridium tetani GN=frr PE=3 SV=1) HSP 1 Score: 150.984 bits (380), Expect = 5.055e-36 Identity = 71/143 (49.65%), Postives = 103/143 (72.03%), Query Frame = 3 Query: 3 SNPVMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKIDSI 431 +NP MLDKIE EYYG+ L +A I+ P++ L IQP+DKSSLK+IEKAI+ SDLG+ PNNDG +IRL +P+LT E R+ + K V K E+ K+A+R++RRD + L+ + +SED++K ++QK+TD Y+KK+D + Sbjct: 32 ANPAMLDKIEAEYYGTMTPLSQLANISVPEARILQIQPWDKSSLKAIEKAILVSDLGLNPNNDGTIIRLIIPELTEETRRNIVKTVKKYGEDTKIAIRSVRRDGNDKIKDLKSD--MSEDDIKKAEEEIQKITDNYVKKVDEM 172
BLAST of CF832536 vs. ExPASy Swiss-Prot
Match: RRF_CLOK5 (Ribosome-recycling factor OS=Clostridium kluyveri (strain ATCC 8527 / DSM 555 / NCIMB 10680) GN=frr PE=3 SV=1) HSP 1 Score: 150.984 bits (380), Expect = 5.055e-36 Identity = 72/146 (49.32%), Postives = 105/146 (71.92%), Query Frame = 3 Query: 3 SNPVMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKIDSIYKQ 440 +NP +LDKIEVEYYG+ + +A I+ P++ L IQP+DKS+LKSIEKAI+ SDLG+ P+NDGE+IRL +P+LT E RK + K + K E+ KVA+R IRR+ ++ L+K+ +SED +K +QK TD ++K ID+I ++ Sbjct: 32 ANPAILDKIEVEYYGAMTPISQLAGISIPEARILAIQPWDKSALKSIEKAILKSDLGINPSNDGEIIRLIIPELTEETRKNIVKNIKKTGEDSKVAIRGIRRECNDKFKALKKKNDISEDEIKKGEEQIQKKTDIFIKNIDAILEK 177
BLAST of CF832536 vs. ExPASy Swiss-Prot
Match: RRF_CLOK1 (Ribosome-recycling factor OS=Clostridium kluyveri (strain NBRC 12016) GN=frr PE=3 SV=1) HSP 1 Score: 150.984 bits (380), Expect = 5.055e-36 Identity = 72/146 (49.32%), Postives = 105/146 (71.92%), Query Frame = 3 Query: 3 SNPVMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKIDSIYKQ 440 +NP +LDKIEVEYYG+ + +A I+ P++ L IQP+DKS+LKSIEKAI+ SDLG+ P+NDGE+IRL +P+LT E RK + K + K E+ KVA+R IRR+ ++ L+K+ +SED +K +QK TD ++K ID+I ++ Sbjct: 32 ANPAILDKIEVEYYGAMTPISQLAGISIPEARILAIQPWDKSALKSIEKAILKSDLGINPSNDGEIIRLIIPELTEETRKNIVKNIKKTGEDSKVAIRGIRRECNDKFKALKKKNDISEDEIKKGEEQIQKKTDIFIKNIDAILEK 177
BLAST of CF832536 vs. ExPASy Swiss-Prot
Match: RRF_STRPS (Ribosome-recycling factor OS=Streptococcus pneumoniae (strain CGSP14) GN=frr PE=3 SV=1) HSP 1 Score: 150.599 bits (379), Expect = 6.602e-36 Identity = 73/143 (51.05%), Postives = 102/143 (71.33%), Query Frame = 3 Query: 3 SNPVMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKIDSI 431 +N +LD++ VEYYG L IA I P++ LL+ P+DKSSLK IE+A+ +SD+G+TP NDG VIRL +P LT E R++L+K V K E KVAVRNIRRDA+ +K +K K+++ED +K L D+QK+TD+ +K ID + Sbjct: 32 ANASLLDRVHVEYYGVETPLNQIASITIPEARVLLVTPFDKSSLKDIERALNASDIGITPANDGSVIRLVIPALTEETRRDLAKEVKKVGENAKVAVRNIRRDAMDEAKKREKAKEITEDELKTLEKDIQKVTDDAVKHIDDM 174
BLAST of CF832536 vs. ExPASy Swiss-Prot
Match: RRF_STRPN (Ribosome-recycling factor OS=Streptococcus pneumoniae GN=frr PE=3 SV=1) HSP 1 Score: 150.599 bits (379), Expect = 6.602e-36 Identity = 73/143 (51.05%), Postives = 102/143 (71.33%), Query Frame = 3 Query: 3 SNPVMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKIDSI 431 +N +LD++ VEYYG L IA I P++ LL+ P+DKSSLK IE+A+ +SD+G+TP NDG VIRL +P LT E R++L+K V K E KVAVRNIRRDA+ +K +K K+++ED +K L D+QK+TD+ +K ID + Sbjct: 32 ANASLLDRVHVEYYGVETPLNQIASITIPEARVLLVTPFDKSSLKDIERALNASDIGITPANDGSVIRLVIPALTEETRRDLAKEVKKVGENAKVAVRNIRRDAMDEAKKREKAKEITEDELKTLEKDIQKVTDDAVKHIDDM 174 The following BLAST results are available for this feature:
BLAST of CF832536 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CF832536 ID=CF832536; Name=CF832536; organism=Citrus sinensis; type=EST; length=651bpback to top |