CF832536
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF832536 vs. ExPASy Swiss-Prot
Match: RRF_BREBN (Ribosome-recycling factor OS=Brevibacillus brevis (strain 47 / JCM 6285 / NBRC 100599) GN=frr PE=3 SV=1) HSP 1 Score: 150.599 bits (379), Expect = 6.602e-36 Identity = 70/145 (48.28%), Postives = 103/145 (71.03%), Query Frame = 3 Query: 3 SNPVMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKIDSIYK 437 +NP MLD++ V+YYG+P + +A I+ P+ L IQP+DK++LK I++A+ SDLG++P+NDG +IRL +P LT ERRKEL K+ K EE KVA+RNIRRDA +KL+K +SED+ + +QK TD+++ ++D I K Sbjct: 32 ANPAMLDRVTVDYYGTPTPISQLANISVPEPRMLTIQPWDKTALKEIDRALQQSDLGISPSNDGVIIRLIIPPLTEERRKELVKLAGKGGEEAKVAIRNIRRDANDEIKKLEKAATISEDDSRRHQETIQKTTDKFIAEVDKIVK 176
BLAST of CF832536 vs. ExPASy Swiss-Prot
Match: RRF_STRZP (Ribosome-recycling factor OS=Streptococcus pneumoniae (strain P1031) GN=frr PE=3 SV=1) HSP 1 Score: 150.214 bits (378), Expect = 8.623e-36 Identity = 75/143 (52.45%), Postives = 101/143 (70.63%), Query Frame = 3 Query: 3 SNPVMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKIDSI 431 +N +LD+I VEYYG L IA I P++ LL+ P+DKSSLK IE+A+ +SDLG TP NDG VIRL +P LT E R++L+K V K E KVAVRNIRRDA+ +K +K K+++ED +K L D+QK+TD+ +K ID + Sbjct: 32 ANASLLDRIHVEYYGVETPLNQIASITIPEARVLLVTPFDKSSLKDIERALNASDLGNTPANDGSVIRLVVPALTEETRRDLAKEVKKVGENAKVAVRNIRRDAMDEAKKQEKAKEITEDELKTLEKDIQKVTDDAVKHIDDM 174
BLAST of CF832536 vs. ExPASy Swiss-Prot
Match: RRF_STRR6 (Ribosome-recycling factor OS=Streptococcus pneumoniae (strain ATCC BAA-255 / R6) GN=frr PE=3 SV=1) HSP 1 Score: 150.214 bits (378), Expect = 8.623e-36 Identity = 73/143 (51.05%), Postives = 102/143 (71.33%), Query Frame = 3 Query: 3 SNPVMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKIDSI 431 +N +LD++ VEYYG L IA I P++ LL+ P+DKSSLK I++A+ +SDLG+TP NDG VIRL +P LT E R++L+K V K E KVAVRNIRRDA+ +K +K K+++ED +K L D+QK+TD+ +K ID + Sbjct: 32 ANASLLDRVHVEYYGVETPLNQIASITIPEARVLLVTPFDKSSLKDIDRALNASDLGITPANDGSVIRLVIPALTEETRRDLAKEVKKVGENAKVAVRNIRRDAMDEAKKQEKAKEITEDELKTLEKDIQKVTDDAVKHIDDM 174
BLAST of CF832536 vs. ExPASy Swiss-Prot
Match: RRF_STRP2 (Ribosome-recycling factor OS=Streptococcus pneumoniae serotype 2 (strain D39 / NCTC 7466) GN=frr PE=3 SV=1) HSP 1 Score: 150.214 bits (378), Expect = 8.623e-36 Identity = 73/143 (51.05%), Postives = 102/143 (71.33%), Query Frame = 3 Query: 3 SNPVMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKIDSI 431 +N +LD++ VEYYG L IA I P++ LL+ P+DKSSLK I++A+ +SDLG+TP NDG VIRL +P LT E R++L+K V K E KVAVRNIRRDA+ +K +K K+++ED +K L D+QK+TD+ +K ID + Sbjct: 32 ANASLLDRVHVEYYGVETPLNQIASITIPEARVLLVTPFDKSSLKDIDRALNASDLGITPANDGSVIRLVIPALTEETRRDLAKEVKKVGENAKVAVRNIRRDAMDEAKKQEKAKEITEDELKTLEKDIQKVTDDAVKHIDDM 174
BLAST of CF832536 vs. ExPASy Swiss-Prot
Match: RRF_DEHSC (Ribosome-recycling factor OS=Dehalococcoides sp. (strain CBDB1) GN=frr PE=3 SV=1) HSP 1 Score: 150.214 bits (378), Expect = 8.623e-36 Identity = 69/143 (48.25%), Postives = 104/143 (72.73%), Query Frame = 3 Query: 3 SNPVMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKIDSI 431 S+P +++ I VEY G P + +A I+ PD + IQP+D+S L +IEKAI+ SDLG+ PNNDG +IRL +P L+ ERR+E+ K+V K+ EE K+A+RN+RRDA+ +KL+K K++S+D++K S LQK+TD ++ K D + Sbjct: 32 SSPALVEHIRVEYAGVPTPINHLANISAPDPRYITIQPWDRSCLSAIEKAIMKSDLGLMPNNDGNIIRLNIPPLSEERRQEMIKIVNKRLEEDKIAMRNVRRDAMDEMKKLEKAKEISQDDLKRGSDQLQKITDNFIAKADKL 174
BLAST of CF832536 vs. ExPASy Swiss-Prot
Match: RRF_DEHE1 (Ribosome-recycling factor OS=Dehalococcoides ethenogenes (strain 195) GN=frr PE=3 SV=1) HSP 1 Score: 150.214 bits (378), Expect = 8.623e-36 Identity = 69/143 (48.25%), Postives = 105/143 (73.43%), Query Frame = 3 Query: 3 SNPVMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKIDSI 431 S+P +++ I+VEY G P + +A I PD + IQP+D+S L +IEKAI+ SDLG+ PNNDG +IRL +P L+ ERR+E+ K+V+K+ EE K+A+RN+RRDA+ +KL+K K++S+D++K S LQK+TD ++ K D + Sbjct: 32 SSPALVEHIKVEYAGVPTPINHLASIAAPDPRYITIQPWDRSCLSAIEKAIMKSDLGLMPNNDGNIIRLNIPPLSEERRQEMIKMVSKRLEEDKIAMRNVRRDAMDEMKKLEKSKEISQDDLKRGSDQLQKITDSFIAKADKL 174
BLAST of CF832536 vs. ExPASy Swiss-Prot
Match: RRF_LACSS (Ribosome-recycling factor OS=Lactobacillus sakei subsp. sakei (strain 23K) GN=frr PE=3 SV=1) HSP 1 Score: 149.828 bits (377), Expect = 1.126e-35 Identity = 73/145 (50.34%), Postives = 103/145 (71.03%), Query Frame = 3 Query: 3 SNPVMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKIDSIYK 437 +N +++++ VEYYG+ L IA I P++ LLI PYDK +L+ IEKA+ ++D+G++P NDG VIRL +PQLT ERRKE++K V K+AE KV VRN RRDA+ +K +K ++SED + DL +Q LT+E KKID+I K Sbjct: 32 ANASLVNRVNVEYYGAMTPLNQIAAITIPEARVLLITPYDKGALEDIEKALYTADIGISPANDGSVIRLVIPQLTGERRKEIAKEVGKEAELAKVVVRNARRDAMDNLKKAEKASEISEDEMHDLEEQVQNLTNEATKKIDAISK 176
BLAST of CF832536 vs. ExPASy Swiss-Prot
Match: RRF_STRGC (Ribosome-recycling factor OS=Streptococcus gordonii (strain Challis / ATCC 35105 / CH1 / DL1 / V288) GN=frr PE=3 SV=1) HSP 1 Score: 149.443 bits (376), Expect = 1.471e-35 Identity = 73/143 (51.05%), Postives = 102/143 (71.33%), Query Frame = 3 Query: 3 SNPVMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKIDSI 431 +N +LD+I VEYYG L IA I P++ LL+ P+DKSSLK IE+AI +SDLG+TP +DG VIRL +P LT E R++L+K V K E K+A+RNIRRDA+ +K +K K+++ED +K L D+QK+TD+ +K ID + Sbjct: 32 ANASLLDRISVEYYGVETPLNQIASITIPEARVLLVTPFDKSSLKDIERAINASDLGITPASDGSVIRLVIPALTEETRRDLAKEVKKIGENAKIAIRNIRRDAMDEAKKQEKAKEITEDELKTLEKDIQKVTDDAVKHIDEM 174
BLAST of CF832536 vs. ExPASy Swiss-Prot
Match: RRF_PROM9 (Ribosome-recycling factor OS=Prochlorococcus marinus (strain MIT 9312) GN=frr PE=3 SV=1) HSP 1 Score: 149.443 bits (376), Expect = 1.471e-35 Identity = 73/142 (51.41%), Postives = 108/142 (76.06%), Query Frame = 3 Query: 3 SNPVMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKIDS 428 +N +LD+I VEYYG+ +KS+A I+T DS ++ IQP+D S L++IEK+I SDLG+TPNNDG+VIR+ +P LT ERRKE K+ +K AEEGKVA+RNIRRDA+ +K +K+ +S D +D S++QK+T++++ I++ Sbjct: 29 ANASLLDRISVEYYGAETPIKSLATISTVDSQTISIQPFDISCLQAIEKSISMSDLGITPNNDGKVIRINVPPLTEERRKEFCKLASKYAEEGKVALRNIRRDAVDKEKKDEKDGLISIDESRDNQSEIQKITNKFIALIET 170
BLAST of CF832536 vs. ExPASy Swiss-Prot
Match: RRF_FINM2 (Ribosome-recycling factor OS=Finegoldia magna (strain ATCC 29328) GN=frr PE=3 SV=1) HSP 1 Score: 149.058 bits (375), Expect = 1.921e-35 Identity = 73/143 (51.05%), Postives = 104/143 (72.73%), Query Frame = 3 Query: 3 SNPVMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKIDSI 431 +NP +LD I VEYYG+ LK +A I+ P++ L IQP+DKS +K IEK I +S+LG+TP+NDG +IRL PQLT +RRKEL+KVV + E+ KV +R+IRRD + +K++K ++SED + L D+Q LTD+ K+ID+I Sbjct: 32 ANPSILDNIMVEYYGTSTPLKQVATISAPEARLLTIQPWDKSIMKEIEKQIQASNLGITPSNDGTIIRLPFPQLTEDRRKELTKVVKEYGEKSKVTIRSIRRDFVDDAKKMEKNAEISEDELHVLLDDIQSLTDKLTKEIDNI 174 The following BLAST results are available for this feature:
BLAST of CF832536 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CF832536 ID=CF832536; Name=CF832536; organism=Citrus sinensis; type=EST; length=651bpback to top |