CF832550
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF832550 vs. ExPASy Swiss-Prot
Match: PABP_COCIM (Polyadenylate-binding protein, cytoplasmic and nuclear OS=Coccidioides immitis GN=PAB1 PE=3 SV=1) HSP 1 Score: 226.868 bits (577), Expect = 5.880e-59 Identity = 105/166 (63.25%), Postives = 137/166 (82.53%), Query Frame = 1 Query: 88 TTSLYVGDLEANVTDSQLYDLFNQMGQVVSVRVCRDLSTRRSLGYGYVNFSNAQEAARALEMLNFTPLNGKPIRVMYSHRDPSLRKSGAGNIFIKNLDKAIDHKALHDTFSAFGNILSCKVATDLNGQSKGYGFVQFDNEESAQKAIEKLNGMLLNDKQVYVGHFL 585 + SLYVG+L+ +VT++ L++LF+ +GQV S+RVCRD TRRSLGY YVN++N + RALE LN+T + G+P R+M+S RDP+LRK+G GN+FIKNLD AID+KALHDTF+AFGNILSCKVA D G SKGYGFV ++ E+AQ AI+ +NGMLLNDK+V+VGH + Sbjct: 54 SASLYVGELDPSVTEAMLFELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNTADGERALEDLNYTLIKGRPCRIMWSQRDPALRKTGQGNVFIKNLDTAIDNKALHDTFAAFGNILSCKVAQDEFGNSKGYGFVHYETAEAAQNAIKHVNGMLLNDKKVFVGHHI 219 HSP 2 Score: 89.7373 bits (221), Expect = 1.122e-17 Identity = 51/171 (29.82%), Postives = 95/171 (55.56%), Query Frame = 1 Query: 85 GTTSLYVGDLEANVTDSQLYDLFNQMGQVVSVRVCRDLSTRRSLGYGYVNFSNAQEAARALEMLNFTPLNGKPIRVMY--SHRDPSLR----KSGAGNIFIKNLDKAIDHKALHDTFSAFGNILSCKVATDL-NGQSKGYGFVQFDNEESAQKAIEKLNGMLLNDKQVYVG 576 G ++++ +L+ + + L+D F G ++S +V +D S GYG+V++ A+ A A++ +N LN K + V + + +D + K+ N+++KN+D+ + D F FG I S +A D +G+S+G+GFV F + ++A A+E LN +++YVG Sbjct: 141 GQGNVFIKNLDTAIDNKALHDTFAAFGNILSCKVAQD-EFGNSKGYGFVHYETAEAAQNAIKHVNGMLLNDKKVFVGHHIAKKDRQSKFEEMKANFTNVYVKNIDQDTTEEEFRDLFEKFGEITSATLARDAESGKSRGFGFVNFTSHDNAAAAVEALNDKDFKGQKLYVG 310 HSP 3 Score: 84.7297 bits (208), Expect = 3.609e-16 Identity = 60/230 (26.09%), Postives = 99/230 (43.04%), Query Frame = 1 Query: 91 TSLYVGDLEANVTDSQLYDLFNQMGQVVSVRVCRDLSTRRSLGYGYVNFSNAQEAARALEMLNFTPLNGKPI---RVMYSH-RDPSLRKSGAG------------NIFIKNLDKAIDHKALHDTFSAFGNILSCKVATDLNGQS-----------------------------------------------------KGYGFVQFDNEESAQKAIEKLNGMLLNDKQVYV 573 T++YV +++ + T+ + DLF + G++ S + RD + +S G+G+VNF++ AA A+E LN G+ + R H R+ LRK N++IKNL ID + L + FS++G I S KV D +S KG+GFV F + + A KA+ ++N +++ K +YV Sbjct: 236 TNVYVKNIDQDTTEEEFRDLFEKFGEITSATLARDAESGKSRGFGFVNFTSHDNAAAAVEALNDKDFKGQKLYVGRAQKKHEREEELRKQYEAARIEKASKYQGVNLYIKNLSDDIDDEKLRELFSSYGTITSAKVMRDFAPESTSDSEKEAKKDSKEPETKEEEPKDEAGDNAENKDNKENKAESKKSEKKPLGKSKGFGFVCFSSPDEASKAVTEMNQRMVHGKPLYV 465
BLAST of CF832550 vs. ExPASy Swiss-Prot
Match: PABP_PHANO (Polyadenylate-binding protein, cytoplasmic and nuclear OS=Phaeosphaeria nodorum GN=PAB1 PE=3 SV=3) HSP 1 Score: 226.098 bits (575), Expect = 1.003e-58 Identity = 106/179 (59.22%), Postives = 143/179 (79.89%), Query Frame = 1 Query: 49 TPLGGGANANQFGTTSLYVGDLEANVTDSQLYDLFNQMGQVVSVRVCRDLSTRRSLGYGYVNFSNAQEAARALEMLNFTPLNGKPIRVMYSHRDPSLRKSGAGNIFIKNLDKAIDHKALHDTFSAFGNILSCKVATDLNGQSKGYGFVQFDNEESAQKAIEKLNGMLLNDKQVYVGHFL 585 TP A+Q + SLYVG+L+ +VT++ L++LF+ +GQV S+RVCRD TRRSLGY YVN++++++ +ALE LN+T + GKP R+M+S RDP+LRK+G GN+FIKNLD AID+KALHDTF+AFGNILSCKVA D G SKGYGFV ++ E+A AI+ +NGMLLN+K+V+VGH + Sbjct: 35 TPTTAAQQAHQ-NSASLYVGELDPSVTEAMLFELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNSSEDGEKALEELNYTVIKGKPCRIMWSQRDPALRKTGQGNVFIKNLDHAIDNKALHDTFAAFGNILSCKVAQDELGNSKGYGFVHYETAEAANNAIKHVNGMLLNEKKVFVGHHI 212 HSP 2 Score: 88.5817 bits (218), Expect = 2.499e-17 Identity = 50/172 (29.07%), Postives = 91/172 (52.91%), Query Frame = 1 Query: 85 GTTSLYVGDLEANVTDSQLYDLFNQMGQVVSVRVCRDLSTRRSLGYGYVNFSNAQEAARALEMLNFTPLNGKPIRVMYSHRDPSLR--------KSGAGNIFIKNLDKAIDHKALHDTFSAFGNILSCKVATDLNGQSKGYGFVQFDNEESAQKAIEKLNGMLLNDKQVYVG 576 G ++++ +L+ + + L+D F G ++S +V +D S GYG+V++ A+ A A++ +N LN K +V H P K+ NI++KN+D + + + F G+I S +A D G+S+G+GFV + E+A A++ LN + +++YVG Sbjct: 134 GQGNVFIKNLDHAIDNKALHDTFAAFGNILSCKVAQD-ELGNSKGYGFVHYETAEAANNAIKHVNGMLLNEK--KVFVGHHIPKKERMSKFEEMKANFTNIYVKNIDLDVTDEDFRELFEKHGDITSASIARDDQGKSRGFGFVNYIRHEAAAVAVDHLNDIEFKGQKLYVG 302 HSP 3 Score: 78.9518 bits (193), Expect = 1.980e-14 Identity = 61/230 (26.52%), Postives = 99/230 (43.04%), Query Frame = 1 Query: 91 TSLYVGDLEANVTDSQLYDLFNQMGQVVSVRVCRDLSTRRSLGYGYVNFSNAQEAARALEMLNFTPLNGKPI---RVMYSH-RDPSLRKSGAG------------NIFIKNLDKAIDHKALHDTFSAFGNILSCKV----------------------------------ATDLNGQ-------------------SKGYGFVQFDNEESAQKAIEKLNGMLLNDKQVYV 573 T++YV +++ +VTD +LF + G + S + RD +S G+G+VN+ + AA A++ LN G+ + R H R+ LRK N++IKNL+ +D + L D F+ FG I S KV +++ NG+ SKG+GFV F N + A KA+ ++N ++ K +YV Sbjct: 229 TNIYVKNIDLDVTDEDFRELFEKHGDITSASIARD-DQGKSRGFGFVNYIRHEAAAVAVDHLNDIEFKGQKLYVGRAQKKHEREEELRKQYEAARLEKQSKYQGVNLYIKNLNDDVDDEKLRDMFTPFGTITSAKVILRDEEKKDEEEKEVKEEKKEDEKKEDEEAKEGSSSEQNGEDTKAGDKVTIKGEKKILGKSKGFGFVCFSNPDEATKAVTEMNQKMIEGKPLYV 457
BLAST of CF832550 vs. ExPASy Swiss-Prot
Match: PABP_EMENI (Polyadenylate-binding protein, cytoplasmic and nuclear OS=Emericella nidulans GN=pab1 PE=2 SV=2) HSP 1 Score: 225.713 bits (574), Expect = 1.310e-58 Identity = 107/179 (59.78%), Postives = 140/179 (78.21%), Query Frame = 1 Query: 49 TPLGGGANANQFGTTSLYVGDLEANVTDSQLYDLFNQMGQVVSVRVCRDLSTRRSLGYGYVNFSNAQEAARALEMLNFTPLNGKPIRVMYSHRDPSLRKSGAGNIFIKNLDKAIDHKALHDTFSAFGNILSCKVATDLNGQSKGYGFVQFDNEESAQKAIEKLNGMLLNDKQVYVGHFL 585 T + A +Q + SLYVG+L+ +VT++ LY+LF+ +GQV S+RVCRD TRRSLGY YVN+++ RAL+ LN+T + GKP R+M+S RDP+LRK+G GN+FIKNLD AID+KALHDTF+AFGNILSCKVA D G SKGYGFV ++ E+A AI+ +NGMLLNDK+V+VGH + Sbjct: 28 TAVEAPATTSQPHSASLYVGELDPSVTEAMLYELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNDTAHGERALDELNYTLIKGKPCRIMWSQRDPALRKTGQGNVFIKNLDSAIDNKALHDTFAAFGNILSCKVAQDEFGVSKGYGFVHYETAEAANNAIKHVNGMLLNDKKVFVGHHI 206 HSP 2 Score: 98.2117 bits (243), Expect = 3.154e-20 Identity = 54/170 (31.76%), Postives = 97/170 (57.06%), Query Frame = 1 Query: 85 GTTSLYVGDLEANVTDSQLYDLFNQMGQVVSVRVCRDLSTRRSLGYGYVNFSNAQEAARALEMLNFTPLNGKPIRVMY--SHRDPSLR----KSGAGNIFIKNLDKAIDHKALHDTFSAFGNILSCKVATDLNGQSKGYGFVQFDNEESAQKAIEKLNGMLLNDKQVYVG 576 G ++++ +L++ + + L+D F G ++S +V +D S GYG+V++ A+ A A++ +N LN K + V + S +D + K+ NI+IKN+D ++ + F FG I S ++ D G+S+G+GFV F ESAQ A+E++N + +++YVG Sbjct: 128 GQGNVFIKNLDSAIDNKALHDTFAAFGNILSCKVAQD-EFGVSKGYGFVHYETAEAANNAIKHVNGMLLNDKKVFVGHHISKKDRQSKFEEMKANFTNIYIKNIDPEVEDEEFRKLFEKFGEITSATLSRDSEGKSRGFGFVNFSTHESAQAAVEEMNDKEVRSQKLYVG 296
BLAST of CF832550 vs. ExPASy Swiss-Prot
Match: PABP_DROME (Polyadenylate-binding protein OS=Drosophila melanogaster GN=pAbp PE=1 SV=3) HSP 1 Score: 225.328 bits (573), Expect = 1.711e-58 Identity = 107/164 (65.24%), Postives = 133/164 (81.10%), Query Frame = 1 Query: 94 SLYVGDLEANVTDSQLYDLFNQMGQVVSVRVCRDLSTRRSLGYGYVNFSNAQEAARALEMLNFTPLNGKPIRVMYSHRDPSLRKSGAGNIFIKNLDKAIDHKALHDTFSAFGNILSCKVATDLNGQSKGYGFVQFDNEESAQKAIEKLNGMLLNDKQVYVGHFL 585 SLYVGDL +V +S L+D F+ G V+S+RVCRD+ TRRSLGY YVNF +A RAL+ +NF + KPIR+M+S RDPSLR+SG GN+FIKNLD+AID+KA++DTFSAFGNILSCKVATD G SKGYGFV F+ EE+A +I+K+NGMLLN K+VYVG F+ Sbjct: 3 SLYVGDLPQDVNESGLFDKFSSAGPVLSIRVCRDVITRRSLGYAYVNFQQPADAERALDTMNFDLVRNKPIRIMWSQRDPSLRRSGVGNVFIKNLDRAIDNKAIYDTFSAFGNILSCKVATDEKGNSKGYGFVHFETEEAANTSIDKVNGMLLNGKKVYVGKFI 166 HSP 2 Score: 87.8113 bits (216), Expect = 4.263e-17 Identity = 63/200 (31.50%), Postives = 96/200 (48.00%), Query Frame = 1 Query: 25 GRFKLRGRTPLGGGANANQFGTTSLYVGDLEANVTDSQLYDLFNQMGQVVSVRVCRDLSTRRSLGYGYVNFSNAQEAARALEMLNFTPLN-GKPIRVMYSH----RDPSLRKSGAG------------NIFIKNLDKAIDHKALHDTFSAFGNILSCKVATDLNGQSKGYGFVQFDNEESAQKAIEKLNGMLLNDKQVYV 573 G+F R G A F T++YV + + D +L + F G++ S +V +S G+G+V F + A A++ LN + GK + V + R L++ N+++KNLD ID L FS +GNI S KV TD G+SKG+GFV F+ A A+ +LNG ++ K +YV Sbjct: 163 GKFIPRKEREKELGEKAKLF--TNVYVKNFTEDFDDEKLKEFFEPYGKITSYKVMSK-EDGKSKGFGFVAFETTEAAEAAVQALNGKDMGEGKSLYVARAQKKAERQQELKRKFEELKQKRHESVFGVNLYVKNLDDTIDDDRLRIAFSPYGNITSAKVMTDEEGRSKGFGFVCFNAASEATCAVTELNGRVVGSKPLYV 359
BLAST of CF832550 vs. ExPASy Swiss-Prot
Match: PABP_YARLI (Polyadenylate-binding protein, cytoplasmic and nuclear OS=Yarrowia lipolytica GN=PAB1 PE=3 SV=1) HSP 1 Score: 224.557 bits (571), Expect = 2.918e-58 Identity = 105/171 (61.40%), Postives = 138/171 (80.70%), Query Frame = 1 Query: 64 GANANQFGTTSLYVGDLEANVTDSQLYDLFNQMGQVVSVRVCRDLSTRRSLGYGYVNFSNAQEAARALEMLNFTPLNGKPIRVMYSHRDPSLRKSGAGNIFIKNLDKAIDHKALHDTFSAFGNILSCKVATDLNGQSKGYGFVQFDNEESAQKAIEKLNGMLLNDKQVYVG 576 G+ +Q SLYVG+L+ +VT++ L+++FN +G V SVRVCRD TRRSLGY YVNF N + RALE LN++P+ +P R+M+S RDP+LRK+GAGNI+IKNLD AID+KALHDTFSAFG ILSCK+ATD G S+G+GFV +++ ESA+ AI+ +NGMLLNDK+V+VG Sbjct: 37 GSKEDQGDNASLYVGELDPSVTEAMLFEIFNPIGPVTSVRVCRDAITRRSLGYAYVNFHNQADGIRALEELNYSPIKERPCRIMWSQRDPALRKTGAGNIYIKNLDPAIDNKALHDTFSAFGQILSCKIATDEFGNSRGFGFVHYESAESAESAIQHVNGMLLNDKKVFVG 207 HSP 2 Score: 85.5001 bits (210), Expect = 2.116e-16 Identity = 53/177 (29.94%), Postives = 90/177 (50.85%), Query Frame = 1 Query: 91 TSLYVGDLEANVTDSQLYDLFNQMGQVVSVRVCRDLSTRRSLGYGYVNFSNAQEAARALEMLNFTPLNGKPI---------------RVMY-SHRDPSLRKSGAGNIFIKNLDKAIDHKALHDTFSAFGNILSCKVATDLNGQSKGYGFVQFDNEESAQKAIEKLNGMLLNDKQVYV 573 T++++ +L +T+++ +L N+ G+ SV + + + G+G+V++ A +A++ L+ T G + R Y + R L K N++IKNLD ID L F+ G I S KV D G+SKG+GFV + + E A KA+ ++N L+ K +YV Sbjct: 227 TNVFIKNLGTEITEAEFEELVNKFGETSSVHLSTN-DEGKPTGFGFVDYKEHDVAVKAIDGLSETEFKGNKLFAGRAKKKYERADELRKQYEASRLEKLNKYQGVNLYIKNLDDTIDDDKLRAEFAPHGTITSAKVMVDEAGKSKGFGFVCYSSPEEATKAVTEMNHRLVAGKPLYV 402 HSP 3 Score: 79.7221 bits (195), Expect = 1.161e-14 Identity = 48/170 (28.24%), Postives = 88/170 (51.76%), Query Frame = 1 Query: 85 GTTSLYVGDLEANVTDSQLYDLFNQMGQVVSVRVCRDLSTRRSLGYGYVNFSNAQEAARALEMLNFTPLNGKPI----RVMYSHRDPSL--RKSGAGNIFIKNLDKAIDHKALHDTFSAFGNILSCKVATDLNGQSKGYGFVQFDNEESAQKAIEKLNGMLLNDKQVYVG 576 G ++Y+ +L+ + + L+D F+ GQ++S ++ D S G+G+V++ +A+ A A++ +N LN K + V S R S +K+ N+FIKNL I + + FG S ++T+ G+ G+GFV + + A KAI+ L+ +++ G Sbjct: 132 GAGNIYIKNLDPAIDNKALHDTFSAFGQILSCKIATD-EFGNSRGFGFVHYESAESAESAIQHVNGMLLNDKKVFVGPHVPKSDRMQSFEEQKNSFTNVFIKNLGTEITEAEFEELVNKFGETSSVHLSTNDEGKPTGFGFVDYKEHDVAVKAIDGLSETEFKGNKLFAG 300
BLAST of CF832550 vs. ExPASy Swiss-Prot
Match: PABP_CHAGB (Polyadenylate-binding protein, cytoplasmic and nuclear OS=Chaetomium globosum GN=PAB1 PE=3 SV=1) HSP 1 Score: 223.016 bits (567), Expect = 8.490e-58 Identity = 103/178 (57.87%), Postives = 141/178 (79.21%), Query Frame = 1 Query: 52 PLGGGANANQFGTTSLYVGDLEANVTDSQLYDLFNQMGQVVSVRVCRDLSTRRSLGYGYVNFSNAQEAARALEMLNFTPLNGKPIRVMYSHRDPSLRKSGAGNIFIKNLDKAIDHKALHDTFSAFGNILSCKVATDLNGQSKGYGFVQFDNEESAQKAIEKLNGMLLNDKQVYVGHFL 585 P A + + SLYVG+L+ +VT++ L++LF+Q+G V S+RVCRD TRRSLGY YVN+++ + +ALE LN+T + G+P R+M+S RDP+LRK+G GN+FIKNLD AID+KALHDTF+AFGNILSCKVA D NG SKGYGFV ++ +E+A +AI+ +N MLLN+K+VYVG+ + Sbjct: 52 PTPSSAAPHPQSSASLYVGELDPSVTEAMLFELFSQIGSVASIRVCRDTITRRSLGYAYVNYNSTSDGEKALEELNYTLIKGRPCRIMWSQRDPALRKTGQGNVFIKNLDVAIDNKALHDTFAAFGNILSCKVAQDENGNSKGYGFVHYETDEAAAQAIKHVNNMLLNEKKVYVGYHI 229 HSP 2 Score: 97.4413 bits (241), Expect = 5.380e-20 Identity = 53/170 (31.18%), Postives = 94/170 (55.29%), Query Frame = 1 Query: 85 GTTSLYVGDLEANVTDSQLYDLFNQMGQVVSVRVCRDLSTRRSLGYGYVNFSNAQEAARALEMLNFTPLNGKPIRVMYS--HRDPSLR----KSGAGNIFIKNLDKAIDHKALHDTFSAFGNILSCKVATDLNGQSKGYGFVQFDNEESAQKAIEKLNGMLLNDKQVYVG 576 G ++++ +L+ + + L+D F G ++S +V +D S GYG+V++ + AA+A++ +N LN K + V Y +D + K+ NI++KN+ + D F+ +G++ S +A D G+S+G+GFV F E A KA+E+LNG + +YVG Sbjct: 151 GQGNVFIKNLDVAIDNKALHDTFAAFGNILSCKVAQD-ENGNSKGYGFVHYETDEAAAQAIKHVNNMLLNEKKVYVGYHIPKKDRQSKFEEMKANFTNIYVKNISLEATDEEFRDLFAKYGDVTSSSLARDSEGKSRGFGFVNFTTHECAAKAVEELNGKEFRGQDLYVG 319
BLAST of CF832550 vs. ExPASy Swiss-Prot
Match: EPAB_XENTR (Embryonic polyadenylate-binding protein OS=Xenopus tropicalis GN=epabp PE=2 SV=1) HSP 1 Score: 221.09 bits (562), Expect = 3.226e-57 Identity = 101/163 (61.96%), Postives = 135/163 (82.82%), Query Frame = 1 Query: 94 SLYVGDLEANVTDSQLYDLFNQMGQVVSVRVCRDLSTRRSLGYGYVNFSNAQEAARALEMLNFTPLNGKPIRVMYSHRDPSLRKSGAGNIFIKNLDKAIDHKALHDTFSAFGNILSCKVATDLNGQSKGYGFVQFDNEESAQKAIEKLNGMLLNDKQVYVGHF 582 SLYVGDL +VT++ LY+ F+ G ++S+RVCRD++TRRSLGY Y+NF +A RAL+ +NF + G+PIR+M+S RDP LRKSG GN+FIKNLD++ID+KAL+DTFSAFGNILSCKV D +G S+GYGFV F+ +E+A +AI+ +NGMLLND++V+VGHF Sbjct: 12 SLYVGDLHPDVTEAMLYEKFSPAGPIMSIRVCRDIATRRSLGYAYINFQQPADAERALDTMNFEVIKGRPIRIMWSQRDPGLRKSGVGNVFIKNLDESIDNKALYDTFSAFGNILSCKVVCDEHG-SRGYGFVHFETQEAANRAIQTMNGMLLNDRKVFVGHF 173 HSP 2 Score: 115.161 bits (287), Expect = 2.493e-25 Identity = 62/170 (36.47%), Postives = 100/170 (58.82%), Query Frame = 1 Query: 85 GTTSLYVGDLEANVTDSQLYDLFNQMGQVVSVRVCRDLSTRRSLGYGYVNFSNAQEAARALEMLNFTPLNGKPIRVMY--SHRDPSLRKSGA----GNIFIKNLDKAIDHKALHDTFSAFGNILSCKVATDLNGQSKGYGFVQFDNEESAQKAIEKLNGMLLNDKQVYVG 576 G ++++ +L+ ++ + LYD F+ G ++S +V D S GYG+V+F + A RA++ +N LN + + V + S R+ L N++IKN + +D K L + FSAFGN LS KV D G+S+G+GFV + N E AQKA+ ++NG +N + +YVG Sbjct: 97 GVGNVFIKNLDESIDNKALYDTFSAFGNILSCKVVCD--EHGSRGYGFVHFETQEAANRAIQTMNGMLLNDRKVFVGHFKSRRERELEYGAKVMEFTNVYIKNFGEDMDDKRLREIFSAFGNTLSVKVMMDDTGRSRGFGFVNYGNHEEAQKAVSEMNGKEVNGRMIYVG 264 HSP 3 Score: 111.694 bits (278), Expect = 2.757e-24 Identity = 67/199 (33.67%), Postives = 107/199 (53.77%), Query Frame = 1 Query: 25 GRFKLRGRTPLGGGANANQFGTTSLYVGDLEANVTDSQLYDLFNQMGQVVSVRVCRDLSTRRSLGYGYVNFSNAQEAARALEMLNFTPLNGKPIRVMYSHR----------------DPSLRKSGAGNIFIKNLDKAIDHKALHDTFSAFGNILSCKVATDLNGQSKGYGFVQFDNEESAQKAIEKLNGMLLNDKQVYV 573 G FK R L GA +F T++Y+ + ++ D +L ++F+ G +SV+V D T RS G+G+VN+ N +EA +A+ +N +NG+ I V + + + + N+++KNLD ID L FS +G I S KV T+ G SKG+GFV F + E A KA+ ++NG +++ K +YV Sbjct: 171 GHFKSRRERELEYGAKVMEF--TNVYIKNFGEDMDDKRLREIFSAFGNTLSVKVMMD-DTGRSRGFGFVNYGNHEEAQKAVSEMNGKEVNGRMIYVGRAQKRIERQGELKRKFEQIKQERINRYQGVNLYVKNLDDGIDDDRLRKEFSPYGTITSAKVMTE-GGHSKGFGFVCFSSPEEATKAVTEMNGRIVSTKPLYV 365
BLAST of CF832550 vs. ExPASy Swiss-Prot
Match: PAP1A_DICDI (Polyadenylate-binding protein 1-A OS=Dictyostelium discoideum GN=pabpc1A PE=1 SV=1) HSP 1 Score: 220.32 bits (560), Expect = 5.503e-57 Identity = 103/165 (62.42%), Postives = 132/165 (80.00%), Query Frame = 1 Query: 88 TTSLYVGDLEANVTDSQLYDLFNQMGQVVSVRVCRDLSTRRSLGYGYVNFSNAQEAARALEMLNFTPLNGKPIRVMYSHRDPSLRKSGAGNIFIKNLDKAIDHKALHDTFSAFGNILSCKVATDLNGQSKGYGFVQFDNEESAQKAIEKLNGMLLNDKQVYVGHF 582 ++SLYVGDL V++ L+++FNQ+G V ++RVCRD +TRRSL Y YVN+ N +A RAL+ LN TP+ GK R+M+S RDPSLRKSG GN+FIKNLDK IDHKAL+DTFSAFGNILSCKV TD SKG+GFV ++ +ESA KAI K+NGM++N ++V+VG F Sbjct: 9 SSSLYVGDLLPEVSEQHLFEIFNQVGLVSNIRVCRDTNTRRSLSYAYVNYYNGADAERALDTLNNTPIRGKACRIMWSQRDPSLRKSGVGNVFIKNLDKGIDHKALYDTFSAFGNILSCKVVTDDGNSSKGFGFVHYETQESADKAIAKVNGMMINGQKVFVGPF 173 HSP 2 Score: 87.8113 bits (216), Expect = 4.263e-17 Identity = 54/171 (31.58%), Postives = 91/171 (53.22%), Query Frame = 1 Query: 91 TSLYVGDLEANVTDSQLYDLFNQMGQVVSVRVCRDLSTRRSLGYGYVNFSNAQEAARALEMLNFTPLNGKPIRVMYSH----RDPSLR-----KSGAGNIFIKNLDKAIDHKALHDTFSAFGNILSCKVATDLNG-QSKGYGFVQFDNEESAQKAIEKLNGMLLNDKQVYV 573 T+++ +L +V QL +L Q G++ ++ + D +S G+G+ NF +A+ A +E N +GKPI + R+ L+ K N++IKN+D +ID+ L + FS FG I S V D SKG+GFV + + A +A+ ++NG ++ K +YV Sbjct: 188 TNVFFKNLSEDVGPDQLKELLQQYGEITNITIMAD-DKGKSKGFGFANFESAEAAKNVVENENGKIFHGKPIYAGRAQKKIEREAELKHTFETKYQGVNLYIKNIDDSIDNDKLREVFSQFGTITSAIVMKDDKATTSKGFGFVCYTAPDEATRAVTEMNGRMIGTKPLYV 357 HSP 3 Score: 87.0409 bits (214), Expect = 7.271e-17 Identity = 46/169 (27.22%), Postives = 86/169 (50.89%), Query Frame = 1 Query: 85 GTTSLYVGDLEANVTDSQLYDLFNQMGQVVSVRVCRDLSTRRSLGYGYVNFSNAQEAARALEMLNFTPLNGK-----PIRVMYSHRDPSLRKSGAGNIFIKNLDKAIDHKALHDTFSAFGNILSCKVATDLNGQSKGYGFVQFDNEESAQKAIEKLNGMLLNDKQVYVG 576 G ++++ +L+ + LYD F+ G ++S +V D S G+G+V++ + A +A+ +N +NG+ P + P+ K N+F KNL + + L + +G I + + D G+SKG+GF F++ E+A+ +E NG + + K +Y G Sbjct: 96 GVGNVFIKNLDKGIDHKALYDTFSAFGNILSCKVVTD-DGNSSKGFGFVHYETQESADKAIAKVNGMMINGQKVFVGPFKSSKERGQPTEVKFT--NVFFKNLSEDVGPDQLKELLQQYGEITNITIMADDKGKSKGFGFANFESAEAAKNVVENENGKIFHGKPIYAG 261
BLAST of CF832550 vs. ExPASy Swiss-Prot
Match: PAP1L_HUMAN (Polyadenylate-binding protein 1-like OS=Homo sapiens GN=PABPC1L PE=2 SV=1) HSP 1 Score: 219.164 bits (557), Expect = 1.226e-56 Identity = 103/172 (59.88%), Postives = 137/172 (79.65%), Query Frame = 1 Query: 67 ANANQFGTTSLYVGDLEANVTDSQLYDLFNQMGQVVSVRVCRDLSTRRSLGYGYVNFSNAQEAARALEMLNFTPLNGKPIRVMYSHRDPSLRKSGAGNIFIKNLDKAIDHKALHDTFSAFGNILSCKVATDLNGQSKGYGFVQFDNEESAQKAIEKLNGMLLNDKQVYVGHF 582 A+ + + SLYVGDL +VT++ LY+ F+ G ++S+RVCRD++TRRSLGY Y+NF +A RAL+ +NF L G+PIR+M+S RDP LRKSG GNIFIKNL+ +ID+KAL+DTFS FGNILSCKVA D +G S+G+GFV F+ E+AQ+AI +NGMLLND++V+VGHF Sbjct: 3 ASGSGYPLASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDVATRRSLGYAYINFQQPADAERALDTMNFEMLKGQPIRIMWSQRDPGLRKSGVGNIFIKNLEDSIDNKALYDTFSTFGNILSCKVACDEHG-SRGFGFVHFETHEAAQQAINTMNGMLLNDRKVFVGHF 173 HSP 2 Score: 110.538 bits (275), Expect = 6.141e-24 Identity = 72/202 (35.64%), Postives = 111/202 (54.95%), Query Frame = 1 Query: 25 GRFKLRGRTPLGGGANANQFGTTSLYVGDLEANVTDSQLYDLFNQMGQVVSVRVCRDLSTRRSLGYGYVNFSNAQEAARALEMLNFTPLNGKPIRVMYSHR-------------------DPSLRKSGAGNIFIKNLDKAIDHKALHDTFSAFGNILSCKVATDLNGQSKGYGFVQFDNEESAQKAIEKLNGMLLNDKQVYV 573 G FK R GA A +F T++YV +L +V + L DLF+Q G+++SV+V RD ++ S +G+VNF +EA +A+ +N ++G R++Y+ R LR+ N+++KNLD +ID L FS +G I S KV T+ G SKG+GFV F + E A KA+ ++NG ++ K +YV Sbjct: 171 GHFKSRREREAELGARALEF--TNIYVKNLPVDVDEQGLQDLFSQFGKMLSVKVMRD-NSGHSRCFGFVNFEKHEEAQKAVVHMNGKEVSG---RLLYAGRAQKRVERQNELKRRFEQMKQDRLRRYQGVNLYVKNLDDSIDDDKLRKEFSPYGVITSAKVMTE-GGHSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYV 365 HSP 3 Score: 100.523 bits (249), Expect = 6.355e-21 Identity = 57/170 (33.53%), Postives = 95/170 (55.88%), Query Frame = 1 Query: 85 GTTSLYVGDLEANVTDSQLYDLFNQMGQVVSVRVCRDLSTRRSLGYGYVNFSNAQEAARALEMLNFTPLNGKPIRVMY----SHRDPSL--RKSGAGNIFIKNLDKAIDHKALHDTFSAFGNILSCKVATDLNGQSKGYGFVQFDNEESAQKAIEKLNGMLLNDKQVYVG 576 G ++++ +LE ++ + LYD F+ G ++S +V D S G+G+V+F + A +A+ +N LN + + V + R+ L R NI++KNL +D + L D FS FG +LS KV D +G S+ +GFV F+ E AQKA+ +NG ++ + +Y G Sbjct: 97 GVGNIFIKNLEDSIDNKALYDTFSTFGNILSCKVACD--EHGSRGFGFVHFETHEAAQQAINTMNGMLLNDRKVFVGHFKSRREREAELGARALEFTNIYVKNLPVDVDEQGLQDLFSQFGKMLSVKVMRDNSGHSRCFGFVNFEKHEEAQKAVVHMNGKEVSGRLLYAG 264
BLAST of CF832550 vs. ExPASy Swiss-Prot
Match: PABP_USTMA (Polyadenylate-binding protein, cytoplasmic and nuclear OS=Ustilago maydis GN=PAB1 PE=3 SV=1) HSP 1 Score: 218.394 bits (555), Expect = 2.091e-56 Identity = 103/172 (59.88%), Postives = 137/172 (79.65%), Query Frame = 1 Query: 70 NANQFGTTSLYVGDLEANVTDSQLYDLFNQMGQVVSVRVCRDLSTRRSLGYGYVNFSNAQEAARALEMLNFTPLNGKPIRVMYSHRDPSLRKSGAGNIFIKNLDKAIDHKALHDTFSAFGNILSCKVATDLNGQSKGYGFVQFDNEESAQKAIEKLNGMLLNDKQVYVGHFL 585 NA+ TSLYVG+L+ +VT++ L+++F+ +G V S+RVCRD TRRSLGY YVNF NA + RA+E LN++ + +P R+M+S RDP+LR++G GNIFIKNLD ID+KALHDTF+AFGNILSCKVAT+ G S GYGFV ++ E+A+ AI+ +NGMLLNDK+VYVGH + Sbjct: 40 NADAANNTSLYVGELDPSVTEAMLFEIFSMIGTVASIRVCRDAVTRRSLGYAYVNFLNAADGERAMEQLNYSLIRNRPCRIMWSQRDPALRRTGQGNIFIKNLDAGIDNKALHDTFAAFGNILSCKVATNETG-SLGYGFVHYETAEAAEAAIKHVNGMLLNDKKVYVGHHI 210 HSP 2 Score: 98.9821 bits (245), Expect = 1.849e-20 Identity = 55/177 (31.07%), Postives = 100/177 (56.50%), Query Frame = 1 Query: 91 TSLYVGDLEANVTDSQLYDLFNQMGQVVSVRVCRDLSTRRSLGYGYVNFSNAQEAARALEMLNFTPLNGKPIRVMY----SHRDPSLRKSGAG------------NIFIKNLDKAIDHKALHDTFSAFGNILSCKVATDLNGQSKGYGFVQFDNEESAQKAIEKLNGMLLNDKQVYV 573 T++Y +++ VTD + LF + G++ S + RD +S G+G+VNF + EA +A++ L+ + G+ + V S R+ LR+S N+++KN+ ++ D + L + F+ FG I SCK+ +G S+G+GFV + E A KA+ ++NG +L+++ +YV Sbjct: 227 TNVYAKNVDPEVTDDEFEKLFTKFGKITSCVLQRD-EDGKSKGFGFVNFEDHNEAQKAVDELHDSDFKGQKLFVARAQKKSEREEELRRSYEAAKNEKLAKFQGVNLYLKNIPESYDDERLREEFAPFGAITSCKIMRAPSGVSRGFGFVCYSAPEEANKAVSEMNGKMLDNRPLYV 402 The following BLAST results are available for this feature:
BLAST of CF832550 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 170
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Sequences
The
following sequences are available for this feature:
EST sequence >CF832550 ID=CF832550; Name=CF832550; organism=Citrus sinensis; type=EST; length=585bpback to top |