CF832550

Overview
NameCF832550
Unique NameCF832550
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length585
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF832550 vs. ExPASy Swiss-Prot
Match: EPABB_XENLA (Embryonic polyadenylate-binding protein B OS=Xenopus laevis GN=epabp-B PE=2 SV=1)

HSP 1 Score: 218.009 bits (554), Expect = 2.731e-56
Identity = 100/172 (58.14%), Postives = 136/172 (79.07%), Query Frame = 1
Query:   67 ANANQFGTTSLYVGDLEANVTDSQLYDLFNQMGQVVSVRVCRDLSTRRSLGYGYVNFSNAQEAARALEMLNFTPLNGKPIRVMYSHRDPSLRKSGAGNIFIKNLDKAIDHKALHDTFSAFGNILSCKVATDLNGQSKGYGFVQFDNEESAQKAIEKLNGMLLNDKQVYVGHF 582
            A   ++   SLY+GDL  +VT++ LY+ F+  G ++S+RVCRD++TRRSLGY Y+NF    +A RAL+ +NF  + G+PIR+M+S RDP LRKSG GN+FIKNLD +ID+KAL+DTFSAFG+ILSCKV  D  G S+GYGFV F+ +E+A +AI+ +NGMLLND++V+VGHF
Sbjct:    3 ATRAEYPLASLYIGDLHPDVTEAMLYEKFSPAGPIMSIRVCRDIATRRSLGYAYINFQQPADAERALDTMNFEVIKGRPIRIMWSQRDPGLRKSGVGNVFIKNLDDSIDNKALYDTFSAFGDILSCKVVCDEYG-SRGYGFVHFETQEAANRAIQTMNGMLLNDRKVFVGHF 173          

HSP 2 Score: 115.161 bits (287), Expect = 2.493e-25
Identity = 63/171 (36.84%), Postives = 103/171 (60.23%), Query Frame = 1
Query:   85 GTTSLYVGDLEANVTDSQLYDLFNQMGQVVSVRV-CRDLSTRRSLGYGYVNFSNAQEAARALEMLNFTPLNGKPIRVMY--SHRDPSLRKSGA----GNIFIKNLDKAIDHKALHDTFSAFGNILSCKVATDLNGQSKGYGFVQFDNEESAQKAIEKLNGMLLNDKQVYVG 576
            G  ++++ +L+ ++ +  LYD F+  G ++S +V C +  +R   GYG+V+F   + A RA++ +N   LN + + V +  S R+  L          N++IKN  + +D K L + FSAFGN LS KV  D +G+S+G+GFV + N E AQKA+ ++NG  +N + VYVG
Sbjct:   97 GVGNVFIKNLDDSIDNKALYDTFSAFGDILSCKVVCDEYGSR---GYGFVHFETQEAANRAIQTMNGMLLNDRKVFVGHFKSRRERELEYGAKVMEFTNVYIKNFGEDMDDKRLKEIFSAFGNTLSVKVMMDNSGRSRGFGFVNYGNHEEAQKAVTEMNGKEVNGRMVYVG 264          

HSP 3 Score: 109.383 bits (272), Expect = 1.368e-23
Identity = 65/199 (32.66%), Postives = 108/199 (54.27%), Query Frame = 1
Query:   25 GRFKLRGRTPLGGGANANQFGTTSLYVGDLEANVTDSQLYDLFNQMGQVVSVRVCRDLSTRRSLGYGYVNFSNAQEAARALEMLNFTPLNGKPIRVMYSHR----------------DPSLRKSGAGNIFIKNLDKAIDHKALHDTFSAFGNILSCKVATDLNGQSKGYGFVQFDNEESAQKAIEKLNGMLLNDKQVYV 573
            G FK R    L  GA   +F  T++Y+ +   ++ D +L ++F+  G  +SV+V  D ++ RS G+G+VN+ N +EA +A+  +N   +NG+ + V  + +                   + +    N+++KNLD  ID   L   FS +G I S KV T+  G SKG+GFV F + E A KA+ ++NG +++ K +YV
Sbjct:  171 GHFKSRRERELEYGAKVMEF--TNVYIKNFGEDMDDKRLKEIFSAFGNTLSVKVMMD-NSGRSRGFGFVNYGNHEEAQKAVTEMNGKEVNGRMVYVGRAQKRIERQGELKRKFEQIKQERINRYQGVNLYVKNLDDGIDDDRLRKEFSPYGTITSTKVMTE-GGHSKGFGFVCFSSPEEATKAVTEMNGRIVSTKPLYV 365          
BLAST of CF832550 vs. ExPASy Swiss-Prot
Match: PABP_CRYNE (Polyadenylate-binding protein, cytoplasmic and nuclear OS=Cryptococcus neoformans GN=PAB1 PE=3 SV=1)

HSP 1 Score: 217.624 bits (553), Expect = 3.567e-56
Identity = 103/177 (58.19%), Postives = 137/177 (77.40%), Query Frame = 1
Query:   49 TPLGGGANANQFGTTSLYVGDLEANVTDSQLYDLFNQMGQVVSVRVCRDLSTRRSLGYGYVNFSNAQEAARALEMLNFTPLNGKPIRVMYSHRDPSLRKSGAGNIFIKNLDKAIDHKALHDTFSAFGNILSCKVATDLNGQSKGYGFVQFDNEESAQKAIEKLNGMLLNDKQVYVGH 579
            TP       N   + SLYVG+L+ +VT++ L+++FN +G V S+RVCRD  TRRSLGY YVN+ NA +  RALE LN++ + G+  R+M+S RDP+LRK+G GNIFIKNLD++ID+KALHDTF+AFG+ILSCKV TD NG+S+G+ FV +   E+A  AI+ +NGMLLNDK+VYVGH
Sbjct:   33 TPAAAAPGGNTV-SASLYVGELDPSVTEAMLFEIFNMIGPVASIRVCRDAVTRRSLGYAYVNYLNAADGERALEHLNYSLIKGQSCRIMWSQRDPALRKTGQGNIFIKNLDQSIDNKALHDTFAAFGDILSCKVGTDENGKSRGFAFVHYSTGEAADAAIKAVNGMLLNDKKVYVGH 208          

HSP 2 Score: 105.531 bits (262), Expect = 1.976e-22
Identity = 60/177 (33.90%), Postives = 96/177 (54.24%), Query Frame = 1
Query:   91 TSLYVGDLEANVTDSQLYDLFNQMGQVVSVRVCRDLSTRRSLGYGYVNFSNAQEAARALEMLNFTPLNGKPI-------------RVMYSHRDPSLR---KSGAGNIFIKNLDKAIDHKALHDTFSAFGNILSCKVATDLNGQSKGYGFVQFDNEESAQKAIEKLNGMLLNDKQVYV 573
            T++Y+ +++  VTD++  DL    G  +SV + RD     S G+G+VN+ N + A +A++ LN   +NGK +              +  SH +  L    KS   N+++KNLD   D   L   F AFG I S KV  D +G S+G+GFV + + + A KA+ ++NG ++  K +YV
Sbjct:  227 TNVYIKNVDLEVTDAEFEDLVKPFGPTISVALSRD-EKGVSKGFGFVNYENHESARKAVDELNEKEVNGKKLYAGRAQTKSEREAELKKSHEEKRLENEAKSAGVNLYVKNLDDEWDDDRLRAEFEAFGTITSSKVMRDDSGVSRGFGFVCYSSPDEATKAVSEMNGKMIGTKPLYV 402          

HSP 3 Score: 90.8929 bits (224), Expect = 5.035e-18
Identity = 52/171 (30.41%), Postives = 93/171 (54.39%), Query Frame = 1
Query:   85 GTTSLYVGDLEANVTDSQLYDLFNQMGQVVSVRVCRDLSTRRSLGYGYVNFSNAQEAARALEMLNFTPLNGKPIRVMYSHRDPSLRKSGAG-------NIFIKNLDKAIDHKALHDTFSAFGNILSCKVATDLNGQSKGYGFVQFDNEESAQKAIEKLNGMLLNDKQVYVG 576
            G  ++++ +L+ ++ +  L+D F   G ++S +V  D    +S G+ +V++S  + A  A++ +N   LN K + V + H     R S          N++IKN+D  +      D    FG  +S  ++ D  G SKG+GFV ++N ESA+KA+++LN   +N K++Y G
Sbjct:  132 GQGNIFIKNLDQSIDNKALHDTFAAFGDILSCKVGTD-ENGKSRGFAFVHYSTGEAADAAIKAVNGMLLNDKKVYVGH-HVGKKERLSKVEELRAQFTNVYIKNVDLEVTDAEFEDLVKPFGPTISVALSRDEKGVSKGFGFVNYENHESARKAVDELNEKEVNGKKLYAG 300          
BLAST of CF832550 vs. ExPASy Swiss-Prot
Match: EPABA_XENLA (Embryonic polyadenylate-binding protein A OS=Xenopus laevis GN=epabp-A PE=1 SV=2)

HSP 1 Score: 217.624 bits (553), Expect = 3.567e-56
Identity = 99/163 (60.74%), Postives = 133/163 (81.60%), Query Frame = 1
Query:   94 SLYVGDLEANVTDSQLYDLFNQMGQVVSVRVCRDLSTRRSLGYGYVNFSNAQEAARALEMLNFTPLNGKPIRVMYSHRDPSLRKSGAGNIFIKNLDKAIDHKALHDTFSAFGNILSCKVATDLNGQSKGYGFVQFDNEESAQKAIEKLNGMLLNDKQVYVGHF 582
            SLY+GDL  +VT++ LY+ F+  G ++S+RVCRD++TRRSL Y Y+NF    +A RAL+ +NF  + G+PIR+M+S RDP LRKSG GN+FIKNLD++ID+KAL+DTFSAFGNILSCKV  D +G S+GYGFV F+  E+A +AI+ +NGMLLND++V+VGHF
Sbjct:   12 SLYIGDLHPDVTEAMLYEKFSPAGPIMSIRVCRDIATRRSLSYAYINFQQPADAERALDTMNFEVIKGRPIRIMWSQRDPGLRKSGVGNVFIKNLDESIDNKALYDTFSAFGNILSCKVVCDEHG-SRGYGFVHFETHEAANRAIQTMNGMLLNDRKVFVGHF 173          

HSP 2 Score: 115.161 bits (287), Expect = 2.493e-25
Identity = 62/170 (36.47%), Postives = 101/170 (59.41%), Query Frame = 1
Query:   85 GTTSLYVGDLEANVTDSQLYDLFNQMGQVVSVRVCRDLSTRRSLGYGYVNFSNAQEAARALEMLNFTPLNGKPIRVMY--SHRDPSLRKSGA----GNIFIKNLDKAIDHKALHDTFSAFGNILSCKVATDLNGQSKGYGFVQFDNEESAQKAIEKLNGMLLNDKQVYVG 576
            G  ++++ +L+ ++ +  LYD F+  G ++S +V  D     S GYG+V+F   + A RA++ +N   LN + + V +  S R+  L          N++IKN  + +D K L + FSAFGN LS KV  D +G+S+G+GFV + N E AQKA+ ++NG  +N + +YVG
Sbjct:   97 GVGNVFIKNLDESIDNKALYDTFSAFGNILSCKVVCD--EHGSRGYGFVHFETHEAANRAIQTMNGMLLNDRKVFVGHFKSRRERELEYGAKVMEFTNVYIKNFGEDMDDKRLREIFSAFGNTLSVKVMMDDSGRSRGFGFVNYGNHEEAQKAVSEMNGKEVNGRMIYVG 264          

HSP 3 Score: 107.842 bits (268), Expect = 3.981e-23
Identity = 65/199 (32.66%), Postives = 106/199 (53.27%), Query Frame = 1
Query:   25 GRFKLRGRTPLGGGANANQFGTTSLYVGDLEANVTDSQLYDLFNQMGQVVSVRVCRDLSTRRSLGYGYVNFSNAQEAARALEMLNFTPLNGKPIRVMYSHR----------------DPSLRKSGAGNIFIKNLDKAIDHKALHDTFSAFGNILSCKVATDLNGQSKGYGFVQFDNEESAQKAIEKLNGMLLNDKQVYV 573
            G FK R    L  GA   +F  T++Y+ +   ++ D +L ++F+  G  +SV+V  D  + RS G+G+VN+ N +EA +A+  +N   +NG+ I V  + +                   + +    N+++KNLD  ID   L   F  +G I S KV T+  G SKG+GFV F + E A KA+ ++NG +++ K +YV
Sbjct:  171 GHFKSRRERELEYGAKVMEF--TNVYIKNFGEDMDDKRLREIFSAFGNTLSVKVMMD-DSGRSRGFGFVNYGNHEEAQKAVSEMNGKEVNGRMIYVGRAQKRIERQSELKRKFEQIKQERINRYQGVNLYVKNLDDGIDDDRLRKEFLPYGTITSAKVMTE-GGHSKGFGFVCFSSPEEATKAVTEMNGRIVSTKPLYV 365          
BLAST of CF832550 vs. ExPASy Swiss-Prot
Match: PABP_CANGA (Polyadenylate-binding protein, cytoplasmic and nuclear OS=Candida glabrata GN=PAB1 PE=3 SV=1)

HSP 1 Score: 213.001 bits (541), Expect = 8.786e-55
Identity = 103/172 (59.88%), Postives = 134/172 (77.91%), Query Frame = 1
Query:   70 NANQFGTTSLYVGDLEANVTDSQLYDLFNQMGQVVSVRVCRDLSTRRSLGYGYVNFSNAQEAARALEMLNFTPLNGKPIRVMYSHRDPSLRKSGAGNIFIKNLDKAIDHKALHDTFSAFGNILSCKVATDLNGQSKGYGFVQFDNEESAQKAIEKLNGMLLNDKQVYVGHFL 585
            N ++  + SLYVGDL+ +V+++ LYD+F+ +G V S+RVCRD  T+ SLGY YVNF++   A  A+E LNFTP+ GK  R+M+S RDPSLRK GAGNIFIKNL   ID+KAL+DTFS FGNILS KVATD  G+SKG+G+V F+ +ESA +AI+ LNGMLLN +++YVG  L
Sbjct:   28 NQSETVSASLYVGDLDPSVSEAHLYDIFSPIGAVSSIRVCRDAITKTSLGYAYVNFNDHDAAKTAIEKLNFTPIKGKLCRIMWSQRDPSLRKKGAGNIFIKNLHPDIDNKALYDTFSVFGNILSSKVATDETGKSKGFGYVHFEEDESASEAIDALNGMLLNGQEIYVGPHL 199          

HSP 2 Score: 102.064 bits (253), Expect = 2.184e-21
Identity = 62/177 (35.03%), Postives = 93/177 (52.54%), Query Frame = 1
Query:   91 TSLYVGDLEANVTDSQLYDLFNQMGQVVSVRVCRDLSTRRSLGYGYVNFSNAQEAARALEMLNFTPLNGKPIRVMYSH----RDPSLRKSGAG------------NIFIKNLDKAIDHKALHDTFSAFGNILSCKVATDLNGQSKGYGFVQFDNEESAQKAIEKLNGMLLNDKQVYV 573
            T++Y+ ++    TD +  +L  + G+  SV V        + G+G+VNF N ++A + +E LN T   G+P+ V  +     R   L+K                N+FIKNLD +ID K L + F+ +G I S KV T  NG+SKG+GFV F   E A KAI + N  ++  K +YV
Sbjct:  216 TNVYIKNINTETTDKEFEELVAKFGKTDSV-VLERTPEGENKGFGFVNFVNHEDAVKCVEELNNTEFKGQPLYVNRAQKKYERQQELKKQYEATRMEKMAKYQGINLFIKNLDDSIDDKKLEEEFAPYGTITSAKVMTTENGKSKGFGFVCFSTPEEATKAITEKNQQIVAGKPLYV 391          

HSP 3 Score: 90.1225 bits (222), Expect = 8.589e-18
Identity = 52/169 (30.77%), Postives = 88/169 (52.07%), Query Frame = 1
Query:   85 GTTSLYVGDLEANVTDSQLYDLFNQMGQVVSVRVCRDLSTRRSLGYGYVNFSNAQEAARALEMLNFTPLNGKPIRV----MYSHRDPSLRKSGAG--NIFIKNLDKAIDHKALHDTFSAFGNILSCKVATDLNGQSKGYGFVQFDNEESAQKAIEKLNGMLLNDKQVYV 573
            G  ++++ +L  ++ +  LYD F+  G ++S +V  D  T +S G+GYV+F   + A+ A++ LN   LNG+ I V        R+    +  A   N++IKN++     K   +  + FG   S  +     G++KG+GFV F N E A K +E+LN      + +YV
Sbjct:  121 GAGNIFIKNLHPDIDNKALYDTFSVFGNILSSKVATD-ETGKSKGFGYVHFEEDESASEAIDALNGMLLNGQEIYVGPHLSKKERESKFEEMKANFTNVYIKNINTETTDKEFEELVAKFGKTDSVVLERTPEGENKGFGFVNFVNHEDAVKCVEELNNTEFKGQPLYV 288          
BLAST of CF832550 vs. ExPASy Swiss-Prot
Match: PABP_ASHGO (Polyadenylate-binding protein, cytoplasmic and nuclear OS=Ashbya gossypii GN=PAB1 PE=3 SV=1)

HSP 1 Score: 210.305 bits (534), Expect = 5.695e-54
Identity = 98/160 (61.25%), Postives = 128/160 (80.00%), Query Frame = 1
Query:   94 SLYVGDLEANVTDSQLYDLFNQMGQVVSVRVCRDLSTRRSLGYGYVNFSNAQEAARALEMLNFTPLNGKPIRVMYSHRDPSLRKSGAGNIFIKNLDKAIDHKALHDTFSAFGNILSCKVATDLNGQSKGYGFVQFDNEESAQKAIEKLNGMLLNDKQVYV 573
            SLYVG+LE  V+++ LYD+F+ +G V S+RVCRD  T  SLGY YVNF + +   +A+E LN+T + GKP R+M+S RDPSLRK G+GNI+IKNL  AID+K+LH+TFS FGNILSCKVATD NG S+G+GFV F+NE  A+ AIE ++GML+ND++VYV
Sbjct:   39 SLYVGELEPTVSEALLYDIFSPIGSVSSIRVCRDAITNTSLGYAYVNFHDHEAGPKAIEQLNYTLIKGKPCRIMWSQRDPSLRKKGSGNIYIKNLHPAIDNKSLHETFSTFGNILSCKVATDENGVSRGFGFVHFENESDARDAIEAVDGMLMNDQEVYV 198          

HSP 2 Score: 93.5893 bits (231), Expect = 7.769e-19
Identity = 56/177 (31.64%), Postives = 92/177 (51.98%), Query Frame = 1
Query:   91 TSLYVGDLEANVTDSQLYDLFNQMGQVVSVRVCRDLSTRRSLGYGYVNFSNAQEAARALEMLNFTPLNGKPIRVMYSHRD----------------PSLRKSGAGNIFIKNLDKAIDHKALHDTFSAFGNILSCKVATDLNGQSKGYGFVQFDNEESAQKAIEKLNGMLLNDKQVYV 573
            T++YV +++   +  +  +LF + G++ S  + +D S  +  G+G+VNF +   AA+A++ LN     G+ + V  + +                   L K    N+F+KNLD +ID + L + F+ FG I S KV  D  G S+G+GFV F   E A KAI + N  ++  K +YV
Sbjct:  219 TNVYVKNIDQETSQEEFEELFGKYGKITSAVLEKD-SEGKLRGFGFVNFEDHAAAAKAVDELNELEFKGQKLYVGRAQKKYERLQELKKQYEAARLEKLAKYQGVNLFVKNLDDSIDDEKLKEEFAPFGTITSAKVMRDETGNSRGFGFVCFSTPEEATKAITEKNQQIVAGKPLYV 394          

HSP 3 Score: 88.1965 bits (217), Expect = 3.264e-17
Identity = 46/170 (27.06%), Postives = 94/170 (55.29%), Query Frame = 1
Query:   85 GTTSLYVGDLEANVTDSQLYDLFNQMGQVVSVRVCRDLSTRRSLGYGYVNFSNAQEAARALEMLNFTPLNGKPIRVMY--SHRDPSLR----KSGAGNIFIKNLDKAIDHKALHDTFSAFGNILSCKVATDLNGQSKGYGFVQFDNEESAQKAIEKLNGMLLNDKQVYVG 576
            G+ ++Y+ +L   + +  L++ F+  G ++S +V  D     S G+G+V+F N  +A  A+E ++   +N + + V    S +D   +    K+   N+++KN+D+    +   + F  +G I S  +  D  G+ +G+GFV F++  +A KA+++LN +    +++YVG
Sbjct:  124 GSGNIYIKNLHPAIDNKSLHETFSTFGNILSCKVATD-ENGVSRGFGFVHFENESDARDAIEAVDGMLMNDQEVYVALHVSKKDRQSKLEEVKAKFTNVYVKNIDQETSQEEFEELFGKYGKITSAVLEKDSEGKLRGFGFVNFEDHAAAAKAVDELNELEFKGQKLYVG 292          
BLAST of CF832550 vs. ExPASy Swiss-Prot
Match: PABP_LODEL (Polyadenylate-binding protein, cytoplasmic and nuclear OS=Lodderomyces elongisporus GN=PAB1 PE=3 SV=1)

HSP 1 Score: 209.92 bits (533), Expect = 7.438e-54
Identity = 98/163 (60.12%), Postives = 131/163 (80.37%), Query Frame = 1
Query:   88 TTSLYVGDLEANVTDSQLYDLFNQMGQVVSVRVCRDLSTRRSLGYGYVNFSNAQEAARALEMLNFTPLNGKPIRVMYSHRDPSLRKSGAGNIFIKNLDKAIDHKALHDTFSAFGNILSCKVATDLNGQSKGYGFVQFDNEESAQKAIEKLNGMLLNDKQVYVG 576
            + SLYVG+L  +V ++ L+++F+ +GQV S+RVCRD  +++SLGY YVN+   ++  +A+E LN+TP+ G+P R+M+S RDPS R+SG GNIFIKNL  AID+KALHDTFSAFG ILS KVATD  GQSK +GFV ++ EE+AQ AIE +NGMLLND++VYVG
Sbjct:   66 SASLYVGELNPSVNEATLFEIFSPIGQVASIRVCRDAVSKKSLGYAYVNYHKLEDGEKAIEELNYTPVEGRPCRIMWSQRDPSARRSGDGNIFIKNLHPAIDNKALHDTFSAFGKILSVKVATDDLGQSKCFGFVHYETEEAAQAAIESVNGMLLNDREVYVG 228          

HSP 2 Score: 107.071 bits (266), Expect = 6.790e-23
Identity = 62/177 (35.03%), Postives = 98/177 (55.37%), Query Frame = 1
Query:   91 TSLYVGDLEANVTDSQLYDLFNQMGQVVSVRVCRDLSTRRSLGYGYVNFSNAQEAARALEMLNFTPLNGKPIRVMYSHRD----------------PSLRKSGAGNIFIKNLDKAIDHKALHDTFSAFGNILSCKVATDLNGQSKGYGFVQFDNEESAQKAIEKLNGMLLNDKQVYV 573
            T++YV +++   T+ +  +LF   G++ S+ + +D +  +S G+G+VNF   + AA+A+E LN   +NG+ I V  + +                   L K    N+F+KNLD+ ID + L + F  FG I S KV  D  G+SKG+GFV F   E A KAI ++N  ++N K +YV
Sbjct:  248 TNIYVKNIDLAYTEKEFEELFAPFGKITSIYLEKD-AEGKSKGFGFVNFEEHEAAAKAVEELNDKEINGQKIYVGRAQKKRERTEELKKQYEAVRLEKLSKYQGVNLFVKNLDEQIDSEKLEEEFKPFGTITSSKVMVDDAGKSKGFGFVCFSTPEEATKAITEMNQRMVNGKPLYV 423          

HSP 3 Score: 102.834 bits (255), Expect = 1.280e-21
Identity = 56/175 (32.00%), Postives = 99/175 (56.57%), Query Frame = 1
Query:   70 NANQFGTTSLYVGDLEANVTDSQLYDLFNQMGQVVSVRVCRDLSTRRSLGYGYVNFSNAQEAARALEMLNFTPLNGKPI----RVMYSHRDPSLRKSGAG--NIFIKNLDKAIDHKALHDTFSAFGNILSCKVATDLNGQSKGYGFVQFDNEESAQKAIEKLNGMLLNDKQVYVG 576
            +A + G  ++++ +L   + +  L+D F+  G+++SV+V  D    +S  +G+V++   + A  A+E +N   LN + +     V    R+  L +  A   NI++KN+D A   K   + F+ FG I S  +  D  G+SKG+GFV F+  E+A KA+E+LN   +N +++YVG
Sbjct:  148 SARRSGDGNIFIKNLHPAIDNKALHDTFSAFGKILSVKVATD-DLGQSKCFGFVHYETEEAAQAAIESVNGMLLNDREVYVGKHVSKKDRESKLEEMKANYTNIYVKNIDLAYTEKEFEELFAPFGKITSIYLEKDAEGKSKGFGFVNFEEHEAAAKAVEELNDKEINGQKIYVG 321          
BLAST of CF832550 vs. ExPASy Swiss-Prot
Match: PABP3_HUMAN (Polyadenylate-binding protein 3 OS=Homo sapiens GN=PABPC3 PE=1 SV=2)

HSP 1 Score: 209.534 bits (532), Expect = 9.714e-54
Identity = 98/167 (58.68%), Postives = 131/167 (78.44%), Query Frame = 1
Query:   82 FGTTSLYVGDLEANVTDSQLYDLFNQMGQVVSVRVCRDLSTRRSLGYGYVNFSNAQEAARALEMLNFTPLNGKPIRVMYSHRDPSLRKSGAGNIFIKNLDKAIDHKALHDTFSAFGNILSCKVATDLNGQSKGYGFVQFDNEESAQKAIEKLNGMLLNDKQVYVGHF 582
            + T SLYVGDL  +VT++ LY+ F+  G ++S+R+CRDL T  S  Y YVNF + ++A  AL+ +NF  + GKP+R+M+S RDPSLRKSG GNIF+KNLDK+I++KAL+DT SAFGNILSC V  D NG SKGYGFV F+  E+A++AI+K+NGMLLN ++V+VG F
Sbjct:    8 YPTASLYVGDLHPDVTEAMLYEKFSPAGPILSIRICRDLITSGSSNYAYVNFQHTKDAEHALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFVKNLDKSINNKALYDTVSAFGNILSCNVVCDENG-SKGYGFVHFETHEAAERAIKKMNGMLLNGRKVFVGQF 173          

HSP 2 Score: 117.472 bits (293), Expect = 5.024e-26
Identity = 65/170 (38.24%), Postives = 100/170 (58.82%), Query Frame = 1
Query:   85 GTTSLYVGDLEANVTDSQLYDLFNQMGQVVSVRVCRDLSTRRSLGYGYVNFSNAQEAARALEMLNFTPLNGKPIRV-MYSHRDPSLRKSGAG-----NIFIKNLDKAIDHKALHDTFSAFGNILSCKVATDLNGQSKGYGFVQFDNEESAQKAIEKLNGMLLNDKQVYVG 576
            G  +++V +L+ ++ +  LYD  +  G ++S  V  D     S GYG+V+F   + A RA++ +N   LNG+ + V  +  R     + GA      N++IKN  + +D + L D F  FG  LS KV TD +G+SKG+GFV F+  E AQKA++++NG  LN KQ+YVG
Sbjct:   97 GVGNIFVKNLDKSINNKALYDTVSAFGNILSCNVVCD--ENGSKGYGFVHFETHEAAERAIKKMNGMLLNGRKVFVGQFKSRKEREAELGARAKEFPNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVG 264          

HSP 3 Score: 108.612 bits (270), Expect = 2.334e-23
Identity = 67/199 (33.67%), Postives = 106/199 (53.27%), Query Frame = 1
Query:   25 GRFKLRGRTPLGGGANANQFGTTSLYVGDLEANVTDSQLYDLFNQMGQVVSVRVCRDLSTRRSLGYGYVNFSNAQEAARALEMLNFTPLNGKPI----------------RVMYSHRDPSLRKSGAGNIFIKNLDKAIDHKALHDTFSAFGNILSCKVATDLNGQSKGYGFVQFDNEESAQKAIEKLNGMLLNDKQVYV 573
            G+FK R       GA A +F   ++Y+ +   ++ D +L DLF + G  +SV+V  D S + S G+G+V+F   ++A +A++ +N   LNGK I                R     +   + +    N+++KNLD  ID + L   FS FG I S KV  +  G+SKG+GFV F + E A KA+ ++NG ++  K +YV
Sbjct:  171 GQFKSRKEREAELGARAKEF--PNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGK-SKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRTFEQMKQDRITRYQVVNLYVKNLDDGIDDERLRKAFSPFGTITSAKVMME-GGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYV 365          
BLAST of CF832550 vs. ExPASy Swiss-Prot
Match: PABP_PICGU (Polyadenylate-binding protein, cytoplasmic and nuclear OS=Pichia guilliermondii GN=PAB1 PE=3 SV=2)

HSP 1 Score: 208.379 bits (529), Expect = 2.164e-53
Identity = 98/172 (56.98%), Postives = 134/172 (77.91%), Query Frame = 1
Query:   61 GGANANQFGTTSLYVGDLEANVTDSQLYDLFNQMGQVVSVRVCRDLSTRRSLGYGYVNFSNAQEAARALEMLNFTPLNGKPIRVMYSHRDPSLRKSGAGNIFIKNLDKAIDHKALHDTFSAFGNILSCKVATDLNGQSKGYGFVQFDNEESAQKAIEKLNGMLLNDKQVYVG 576
            G     +  + SLYVG+L  +V ++ L+++F+ +GQV S+RVCRD  T++SLGY YVNF    + +RA+E LN++ ++G+P R+M+S RDPSLR++G GNIFIKNL  AID+KALHDTFSAFG ILSCKVATD  GQSK +GFV ++  E+A+ AIE +NGMLLND++V+VG
Sbjct:   48 GAGEEGEEASASLYVGELNPSVNEALLFEIFSPIGQVSSIRVCRDAVTKKSLGYAYVNFHKHADGSRAIEELNYSLVDGRPCRIMWSQRDPSLRRNGDGNIFIKNLHPAIDNKALHDTFSAFGRILSCKVATDELGQSKCFGFVHYETAEAAEAAIENVNGMLLNDREVFVG 219          

HSP 2 Score: 100.908 bits (250), Expect = 4.866e-21
Identity = 60/177 (33.90%), Postives = 95/177 (53.67%), Query Frame = 1
Query:   91 TSLYVGDLEANVTDSQLYDLFNQMGQVVSVRVCRDLSTRRSLGYGYVNFSNAQEAARALEMLNFTPLNGKPI----------------RVMYSHRDPSLRKSGAGNIFIKNLDKAIDHKALHDTFSAFGNILSCKVATDLNGQSKGYGFVQFDNEESAQKAIEKLNGMLLNDKQVYV 573
            T++YV +L   V +++  ++F   G V SV +  D    +S G+G+VNF N + A  A++ +N   ++G+ +                R+  S R   L K    N+F+KNLD +ID + L + F  FG I S +V  D  G+SKG+GFV F + E A KAI ++N  ++  K +YV
Sbjct:  239 TNVYVKNLAPEVDNAKFEEIFKPFGPVTSVHLETD-QEGKSRGFGFVNFENHESALNAVKEMNDKEIDGQKLYVGRAQKKRERLDELKRLYESTRLEKLSKYQGVNLFVKNLDDSIDSEKLEEEFKPFGTITSARVMVDDAGKSKGFGFVCFSSPEEATKAITEMNQRMIQGKPLYV 414          

HSP 3 Score: 94.7449 bits (234), Expect = 3.487e-19
Identity = 51/170 (30.00%), Postives = 97/170 (57.06%), Query Frame = 1
Query:   85 GTTSLYVGDLEANVTDSQLYDLFNQMGQVVSVRVCRDLSTRRSLGYGYVNFSNAQEAARALEMLNFTPLNGKPIRV--MYSHRDPSLR----KSGAGNIFIKNLDKAIDHKALHDTFSAFGNILSCKVATDLNGQSKGYGFVQFDNEESAQKAIEKLNGMLLNDKQVYVG 576
            G  ++++ +L   + +  L+D F+  G+++S +V  D    +S  +G+V++  A+ A  A+E +N   LN + + V    S RD   +    K+   N+++KNL   +D+    + F  FG + S  + TD  G+S+G+GFV F+N ESA  A++++N   ++ +++YVG
Sbjct:  144 GDGNIFIKNLHPAIDNKALHDTFSAFGRILSCKVATD-ELGQSKCFGFVHYETAEAAEAAIENVNGMLLNDREVFVGKHVSKRDRESKFEEMKANFTNVYVKNLAPEVDNAKFEEIFKPFGPVTSVHLETDQEGKSRGFGFVNFENHESALNAVKEMNDKEIDGQKLYVG 312          
BLAST of CF832550 vs. ExPASy Swiss-Prot
Match: PABP_YEAST (Polyadenylate-binding protein, cytoplasmic and nuclear OS=Saccharomyces cerevisiae GN=PAB1 PE=1 SV=4)

HSP 1 Score: 207.994 bits (528), Expect = 2.826e-53
Identity = 98/176 (55.68%), Postives = 136/176 (77.27%), Query Frame = 1
Query:   58 GGGANANQFGTTSLYVGDLEANVTDSQLYDLFNQMGQVVSVRVCRDLSTRRSLGYGYVNFSNAQEAARALEMLNFTPLNGKPIRVMYSHRDPSLRKSGAGNIFIKNLDKAIDHKALHDTFSAFGNILSCKVATDLNGQSKGYGFVQFDNEESAQKAIEKLNGMLLNDKQVYVGHFL 585
            G  + + +  + SLYVGDLE +V+++ LYD+F+ +G V S+RVCRD  T+ SLGY YVNF++ +   +A+E LN+TP+ G+  R+M+S RDPSLRK G+GNIFIKNL   ID+KAL+DTFS FG+ILS K+ATD NG+SKG+GFV F+ E +A++AI+ LNGMLLN +++YV   L
Sbjct:   27 GSESQSVENSSASLYVGDLEPSVSEAHLYDIFSPIGSVSSIRVCRDAITKTSLGYAYVNFNDHEAGRKAIEQLNYTPIKGRLCRIMWSQRDPSLRKKGSGNIFIKNLHPDIDNKALYDTFSVFGDILSSKIATDENGKSKGFGFVHFEEEGAAKEAIDALNGMLLNGQEIYVAPHL 202          

HSP 2 Score: 106.686 bits (265), Expect = 8.868e-23
Identity = 60/177 (33.90%), Postives = 97/177 (54.80%), Query Frame = 1
Query:   91 TSLYVGDLEANVTDSQLYDLFNQMGQVVSVRVCRDLSTRRSLGYGYVNFSNAQEAARALEMLNFTPLNGKPIRV----------------MYSHRDPSLRKSGAGNIFIKNLDKAIDHKALHDTFSAFGNILSCKVATDLNGQSKGYGFVQFDNEESAQKAIEKLNGMLLNDKQVYV 573
            T+LYV ++ +  TD Q  +LF + G +VS  + +D   +   G+G+VN+   ++A +A+E LN + LNG+ + V                  ++R   + K    N+F+KNLD ++D + L + F+ +G I S KV    NG+SKG+GFV F   E A KAI + N  ++  K +YV
Sbjct:  219 TNLYVKNINSETTDEQFQELFAKFGPIVSASLEKDADGKLK-GFGFVNYEKHEDAVKAVEALNDSELNGEKLYVGRAQKKNERMHVLKKQYEAYRLEKMAKYQGVNLFVKNLDDSVDDEKLEEEFAPYGTITSAKVMRTENGKSKGFGFVCFSTPEEATKAITEKNQQIVAGKPLYV 394          

HSP 3 Score: 100.523 bits (249), Expect = 6.355e-21
Identity = 54/170 (31.76%), Postives = 96/170 (56.47%), Query Frame = 1
Query:   85 GTTSLYVGDLEANVTDSQLYDLFNQMGQVVSVRVCRDLSTRRSLGYGYVNFSNAQEAARALEMLNFTPLNGKPIRVM----YSHRDPSLRKSGAG--NIFIKNLDKAIDHKALHDTFSAFGNILSCKVATDLNGQSKGYGFVQFDNEESAQKAIEKLNGMLLNDKQVYVG 576
            G+ ++++ +L  ++ +  LYD F+  G ++S ++  D    +S G+G+V+F     A  A++ LN   LNG+ I V        RD  L ++ A   N+++KN++     +   + F+ FG I+S  +  D +G+ KG+GFV ++  E A KA+E LN   LN +++YVG
Sbjct:  124 GSGNIFIKNLHPDIDNKALYDTFSVFGDILSSKIATD-ENGKSKGFGFVHFEEEGAAKEAIDALNGMLLNGQEIYVAPHLSRKERDSQLEETKAHYTNLYVKNINSETTDEQFQELFAKFGPIVSASLEKDADGKLKGFGFVNYEKHEDAVKAVEALNDSELNGEKLYVG 292          
BLAST of CF832550 vs. ExPASy Swiss-Prot
Match: PABP_PICST (Polyadenylate-binding protein, cytoplasmic and nuclear OS=Pichia stipitis GN=PAB1 PE=3 SV=1)

HSP 1 Score: 207.608 bits (527), Expect = 3.691e-53
Identity = 95/163 (58.28%), Postives = 130/163 (79.75%), Query Frame = 1
Query:   88 TTSLYVGDLEANVTDSQLYDLFNQMGQVVSVRVCRDLSTRRSLGYGYVNFSNAQEAARALEMLNFTPLNGKPIRVMYSHRDPSLRKSGAGNIFIKNLDKAIDHKALHDTFSAFGNILSCKVATDLNGQSKGYGFVQFDNEESAQKAIEKLNGMLLNDKQVYVG 576
            T SLYVG+L  +V ++ L+++F+ +GQV S+RVCRD  +++SLGY YVN+   ++  +A+E LN++P+ G+P R+M+S RDPS R+SG GNIFIKNL  AID+KALHDTFS FG ILSCKVATD  GQSK +GFV ++  E+A+ AIE +NGMLLND++V+VG
Sbjct:   51 TASLYVGELNTSVNEATLFEIFSPIGQVSSIRVCRDAVSKKSLGYAYVNYHKMEDGEKAIEELNYSPIEGRPCRIMWSQRDPSARRSGDGNIFIKNLHPAIDNKALHDTFSTFGKILSCKVATDDMGQSKCFGFVHYETAEAAEAAIENVNGMLLNDREVFVG 213          

HSP 2 Score: 100.138 bits (248), Expect = 8.300e-21
Identity = 61/177 (34.46%), Postives = 94/177 (53.11%), Query Frame = 1
Query:   91 TSLYVGDLEANVTDSQLYDLFNQMGQVVSVRVCRDLSTRRSLGYGYVNFSNAQEAARALEMLNFTPLNGKPIRV---------------MYSH-RDPSLRKSGAGNIFIKNLDKAIDHKALHDTFSAFGNILSCKVATDLNGQSKGYGFVQFDNEESAQKAIEKLNGMLLNDKQVYV 573
            T++YV +++   ++  L  LF   G + S+ + +D +  +S G+G+VN+   + A +A+E LN   +NG+ I V                Y + R   L K    N+FIKNLD  ID + L + F  FG I S +V  D  G+SKG+GFV F + E A KAI ++N  +   K +YV
Sbjct:  233 TNIYVKNIDLEYSEEDLKKLFTPYGAITSIYLEKD-AEGKSKGFGFVNYEGHEAAVKAVEELNDKEINGQKIYVGRAQKKRERMEELKKQYENTRLEKLSKYQGVNLFIKNLDDTIDSEKLEEEFKPFGTITSARVMVDETGKSKGFGFVCFSSPEEATKAITEMNQRMFFGKPLYV 408          

HSP 3 Score: 94.3597 bits (233), Expect = 4.554e-19
Identity = 53/175 (30.29%), Postives = 99/175 (56.57%), Query Frame = 1
Query:   70 NANQFGTTSLYVGDLEANVTDSQLYDLFNQMGQVVSVRVCRDLSTRRSLGYGYVNFSNAQEAARALEMLNFTPLNGKPIRV--MYSHRDPSLR----KSGAGNIFIKNLDKAIDHKALHDTFSAFGNILSCKVATDLNGQSKGYGFVQFDNEESAQKAIEKLNGMLLNDKQVYVG 576
            +A + G  ++++ +L   + +  L+D F+  G+++S +V  D    +S  +G+V++  A+ A  A+E +N   LN + + V    S +D   +    K+   NI++KN+D     + L   F+ +G I S  +  D  G+SKG+GFV ++  E+A KA+E+LN   +N +++YVG
Sbjct:  133 SARRSGDGNIFIKNLHPAIDNKALHDTFSTFGKILSCKVATD-DMGQSKCFGFVHYETAEAAEAAIENVNGMLLNDREVFVGKHISKKDRESKFEEIKANFTNIYVKNIDLEYSEEDLKKLFTPYGAITSIYLEKDAEGKSKGFGFVNYEGHEAAVKAVEELNDKEINGQKIYVG 306          
The following BLAST results are available for this feature:
BLAST of CF832550 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 170
Match NameE-valueIdentityDescription
EPABB_XENLA2.731e-5658.14Embryonic polyadenylate-binding protein B OS=Xenop... [more]
PABP_CRYNE3.567e-5658.19Polyadenylate-binding protein, cytoplasmic and nuc... [more]
EPABA_XENLA3.567e-5660.74Embryonic polyadenylate-binding protein A OS=Xenop... [more]
PABP_CANGA8.786e-5559.88Polyadenylate-binding protein, cytoplasmic and nuc... [more]
PABP_ASHGO5.695e-5461.25Polyadenylate-binding protein, cytoplasmic and nuc... [more]
PABP_LODEL7.438e-5460.12Polyadenylate-binding protein, cytoplasmic and nuc... [more]
PABP3_HUMAN9.714e-5458.68Polyadenylate-binding protein 3 OS=Homo sapiens GN... [more]
PABP_PICGU2.164e-5356.98Polyadenylate-binding protein, cytoplasmic and nuc... [more]
PABP_YEAST2.826e-5355.68Polyadenylate-binding protein, cytoplasmic and nuc... [more]
PABP_PICST3.691e-5358.28Polyadenylate-binding protein, cytoplasmic and nuc... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_02A15_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa02A15, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832550 ID=CF832550; Name=CF832550; organism=Citrus sinensis; type=EST; length=585bp
TTTTTCTTTCCCCTTTAGAGATGGGGCAGGTTCAAGCTCAGGGGCAGAAC
GCCCCTTGGAGGTGGGGCCAATGCGAATCAATTCGGGACGACGTCGCTTT
ACGTCGGGGATCTGGAGGCGAACGTGACCGATTCGCAGCTGTACGATCTG
TTTAATCAAATGGGTCAAGTGGTTTCGGTTCGGGTTTGTAGGGACTTGTC
GACCCGACGATCTCTCGGTTACGGCTACGTTAACTTCAGTAACGCACAGG
AAGCTGCAAGGGCATTGGAGATGCTGAACTTCACACCTCTGAATGGAAAG
CCCATTAGGGTTATGTATTCTCATCGTGACCCAAGTCTTCGCAAAAGTGG
CGCAGGGAATATTTTCATTAAGAACCTAGATAAGGCCATTGATCACAAAG
CTTTGCACGATACCTTTTCTGCTTTTGGGAACATTCTCTCTTGCAAGGTT
GCTACAGACCTCAATGGTCAGTCAAAGGGCTATGGATTTGTACAATTTGA
CAATGAGGAGTCTGCCCAAAAAGCTATTGAGAAGTTGAACGGTATGTTAT
TGAATGACAAGCAAGTTTATGTTGGACATTTCCTC
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