CF832555
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF832555 vs. ExPASy Swiss-Prot
Match: RL2_MYCHJ (50S ribosomal protein L2 OS=Mycoplasma hyopneumoniae (strain J / ATCC 25934 / NCTC 10110) GN=rplB PE=3 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 1.201e-17 Identity = 60/164 (36.59%), Postives = 83/164 (50.61%), Query Frame = -2 Query: 320 QKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGG-NHQHIGHASTVRRDAPPGQK 808 +K +A + + GQ + G K+ ++VGN LP+ IPEG V N+E G L R++G +A I + + +KL SG + I + CRA IG V + + KAG HK P VRG MNP +HPHGGG Q IG S + P G+K Sbjct: 101 EKRYILAPKNLKVGQKISSGPKSDILVGNALPLAKIPEGTFVHNIELKPGAGAKLIRSAGTWAQIQGRDENGKYVILKLKSGEYRRILATCRATIGVVGNEENSLVNIGKAGRNRHK-----GIRPTVRGSVMNPNDHPHGGGEGKQPIGRKSPL---TPWGKK 256
BLAST of CF832555 vs. ExPASy Swiss-Prot
Match: RL2_LACLS (50S ribosomal protein L2 OS=Lactococcus lactis subsp. cremoris (strain SK11) GN=rplB PE=3 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 1.201e-17 Identity = 58/152 (38.16%), Postives = 79/152 (51.97%), Query Frame = -2 Query: 353 KELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGG-NHQHIGHAS 805 K +AA+G+ G V G A + VGN LP+ +IP G ++ N+E G G L R++G A ++ + T V+L SG ++I S CRA IG V ++ L KAG H P VRG MNP +HPHGGG Q +G S Sbjct: 101 KSYILAAKGLEVGMTVVSGPDADIKVGNALPLANIPVGTLIHNIELKPGKGGQLVRSAGASAQVL--GSEGKYTLVRLQSGEVRMILSTCRATIGVVGNEQQSLINLGKAGRTRH-----MGIRPTVRGSVMNPNDHPHGGGEGRQPVGRKS 245
BLAST of CF832555 vs. ExPASy Swiss-Prot
Match: RL2_LACLM (50S ribosomal protein L2 OS=Lactococcus lactis subsp. cremoris (strain MG1363) GN=rplB PE=3 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 1.201e-17 Identity = 58/152 (38.16%), Postives = 79/152 (51.97%), Query Frame = -2 Query: 353 KELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGG-NHQHIGHAS 805 K +AA+G+ G V G A + VGN LP+ +IP G ++ N+E G G L R++G A ++ + T V+L SG ++I S CRA IG V ++ L KAG H P VRG MNP +HPHGGG Q +G S Sbjct: 101 KSYILAAKGLEVGMTVVSGPDADIKVGNALPLANIPVGTLIHNIELKPGKGGQLVRSAGASAQVL--GSEGKYTLVRLQSGEVRMILSTCRATIGVVGNEQQSLINLGKAGRTRH-----MGIRPTVRGSVMNPNDHPHGGGEGRQPVGRKS 245
BLAST of CF832555 vs. ExPASy Swiss-Prot
Match: RL2_DESVM (50S ribosomal protein L2 OS=Desulfovibrio vulgaris (strain Miyazaki F / DSM 19637) GN=rplB PE=3 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 1.201e-17 Identity = 55/153 (35.95%), Postives = 79/153 (51.63%), Query Frame = -2 Query: 362 QKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCW----PKVRGVAMNPVEHPHGGGNHQHIG 808 +K +A G+ G V G+ A + GN +P+ IP G V+ N+E + G G RA+G YA +++ + +++PSG + + + C A IGQV L KAG RN W PKVRGVAMNP++HP GGG + G Sbjct: 100 EKRYILAPLGIKQGDMVQAGEGADIKPGNAMPMARIPVGTVLHNIELYPGRGGQFCRAAGTYAQLVA--KEGKYALLRMPSGEVRKVLAACCATIGQVGNVNHENISLGKAG---------RNRWLGRRPKVRGVAMNPIDHPLGGGEGRSSG 241
BLAST of CF832555 vs. ExPASy Swiss-Prot
Match: RL2_DESRM (50S ribosomal protein L2 OS=Desulfotomaculum reducens (strain MI-1) GN=rplB PE=3 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 1.201e-17 Identity = 52/143 (36.36%), Postives = 76/143 (53.15%), Query Frame = -2 Query: 380 QKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGG 808 +K +A G+ G V G A + VGN LP+R+IP G +V N+E + G + R++G A +++ + ++LPSG +++ CRA IGQV + KAG + H P VRG MNPV+HPHGGG Sbjct: 100 EKRYILAPVGLEVGVIVESGPDADIKVGNCLPLRNIPVGTMVHNIELYPGAGAQMVRSAGAAAQLMA--KEGKYANLRLPSGEMRLVLQECRATIGQVGNLEHENVTIGKAGRSRH-----LGIRPTVRGKVMNPVDHPHGGG 235
BLAST of CF832555 vs. ExPASy Swiss-Prot
Match: RL2_CHLTE (50S ribosomal protein L2 OS=Chlorobium tepidum GN=rplB PE=3 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 1.201e-17 Identity = 54/166 (32.53%), Postives = 86/166 (51.81%), Query Frame = -2 Query: 323 QKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCW----PKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQ 808 +K +A + + G + G+K + VGN +P+++IP G+ V N+E +G G +AR++G YAV+ + + + +K+PSG + + CRA IG + L KAG R+ W P+ RG+AMNPV+HP GGG + +P GQ Sbjct: 100 EKRYILAPKNLKVGDRIESGEKVDIKVGNTMPLKNIPIGSDVHNIELKIGKGGQIARSAGAYAVLAAR--EGNYATLKMPSGEIRKVRIECRATIGVIGNAEHENISLGKAG---------RSRWLGIRPQTRGMAMNPVDHPMGGGEGKSKSGGGRKHPKSPWGQ 254
BLAST of CF832555 vs. ExPASy Swiss-Prot
Match: RL2_BRASO (50S ribosomal protein L2 OS=Bradyrhizobium sp. (strain ORS278) GN=rplB PE=3 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 1.201e-17 Identity = 50/144 (34.72%), Postives = 77/144 (53.47%), Query Frame = -2 Query: 362 IAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIG 793 +A + + G + G + GNV+P+ ++P G +V N+E +G G LAR++G YA ++ D+D V+L SG ++++ CR IG V+ + KAG R N RGVAMNP++HPHGGG + G Sbjct: 105 LAPQRLAVGDTIVAGNYVDVKPGNVMPLGNMPVGTIVHNIEVKIGKGGQLARSAGTYAQLVGR--DHDYVIVRLNSGEQRLVHGRCRGTIGAVSNPDHMNTSIGKAGRKRWMGRRPHN-----RGVAMNPIDHPHGGGEGRTSG 241
BLAST of CF832555 vs. ExPASy Swiss-Prot
Match: RL2_BRAJA (50S ribosomal protein L2 OS=Bradyrhizobium japonicum GN=rplB PE=3 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 1.201e-17 Identity = 50/148 (33.78%), Postives = 78/148 (52.70%), Query Frame = -2 Query: 362 IAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCW----PKVRGVAMNPVEHPHGGGNHQHIG 793 +A + + G V G + GNV+P+ ++P G ++ N+E +G G LAR++G YA ++ D D ++L SG ++++ CR IG V+ + KAG RN W P RGV+MNP++HPHGGG + G Sbjct: 105 LAPQRLAVGDSVVAGNYVDVKPGNVMPLGNMPVGTIIHNIEVKIGKGGQLARSAGTYAQLVGR--DQDYVIIRLNSGEQRLVHGRCRGTIGAVSNPDHMNTSIGKAG---------RNRWLGRKPHNRGVSMNPIDHPHGGGEGRTSG 241
BLAST of CF832555 vs. ExPASy Swiss-Prot
Match: RL2_BACSK (50S ribosomal protein L2 OS=Bacillus clausii (strain KSM-K16) GN=rplB PE=3 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 1.201e-17 Identity = 56/147 (38.10%), Postives = 76/147 (51.70%), Query Frame = -2 Query: 380 QKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCW----PKVRGVAMNPVEHPHGGG 808 +K +A +G+ G + G A + GN LP+ +IP G V+ N+E G G L R++G A ++ + D V+L SG + I S CRA IGQV G E L+ G A R+ W P VRG MNP +HPHGGG Sbjct: 100 EKRYILAPKGLTVGTVIVSGPDADIKTGNALPLANIPVGTVIHNIELRPGKGGQLVRSAGTEAQLL--GKEGDYALVRLNSGETRYILSTCRATIGQV---GNVEHELINIGKA------GRSRWKGIRPTVRGSVMNPNDHPHGGG 235
BLAST of CF832555 vs. ExPASy Swiss-Prot
Match: RK2_PROWI (50S ribosomal protein L2, plastid OS=Prototheca wickerhamii GN=rpl2 PE=3 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 1.201e-17 Identity = 58/155 (37.42%), Postives = 83/155 (53.55%), Query Frame = -2 Query: 347 QKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQ-HIGHASTV 808 +K ++ G+ G+ V A + VGN LP+ +IP G V NVE G G L R++G A I++ + + LPSG ++IP C A +G+V + L KAG + ++ +R P VRG AMNPV+HPHGGG + IG A V Sbjct: 100 EKRYILSPTGLKVGEMVIASPNAPITVGNTLPLYNIPLGTSVHNVELQPGAGGQLVRSAGSVAQIVA--KEGQWATLHLPSGEYRLIPQKCWATVGRVGNLDNSNITLGKAGRS--RWLSQR---PHVRGSAMNPVDHPHGGGEGKAPIGRARPV 247 The following BLAST results are available for this feature:
BLAST of CF832555 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CF832555 ID=CF832555; Name=CF832555; organism=Citrus sinensis; type=EST; length=815bpback to top |