CF832564
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF832564 vs. ExPASy Swiss-Prot
Match: RL30_NEUCR (60S ribosomal protein L30 OS=Neurospora crassa GN=rpl-30 PE=3 SV=1) HSP 1 Score: 130.183 bits (326), Expect = 7.846e-30 Identity = 59/94 (62.77%), Postives = 77/94 (81.91%), Query Frame = 3 Query: 171 ESINNRLALVMKSGKYTLGYKTVLRSLRSSKGKLILLSNNCPPLRKSEIEYYAMLAKVGVHHYNGNNVDLGTACGKYFRVSCLSIIDPGDSDII 452 +SI +LALV+KSGK LGY++ L++LRS K KLIL+S N PPLRKSE+EYY+M++K VHHY G N++LGTACGK FR S ++I+D GDSDI+ Sbjct: 11 QSIGAKLALVIKSGKVVLGYRSTLKALRSGKAKLILISANTPPLRKSELEYYSMMSKTAVHHYTGTNIELGTACGKLFRCSTMAILDAGDSDIL 104
BLAST of CF832564 vs. ExPASy Swiss-Prot
Match: RL30_DICDI (60S ribosomal protein L30 OS=Dictyostelium discoideum GN=rpl30 PE=3 SV=1) HSP 1 Score: 128.642 bits (322), Expect = 2.283e-29 Identity = 62/97 (63.92%), Postives = 81/97 (83.51%), Query Frame = 3 Query: 171 ESINNRLALVMKSGKYTLGYKTVLRSLRSSKGKLILLSNNCPPLRKSEIEYYAMLAKVGVHHYNGNNVDLGTACGKYFRVSCLSIIDPGDSDIIKSL 461 E+I ++LALVMKSGK LGYK+ L++LR+ K KLILL++N P +R+SEIEYYAML+K VH Y+GNNVDLGTA G+++RVS +SI D GDSDI+ +L Sbjct: 12 ENIGSKLALVMKSGKSQLGYKSTLKTLRAGKSKLILLASNLPSIRRSEIEYYAMLSKTTVHLYSGNNVDLGTALGRHYRVSVMSITDAGDSDILTAL 108
BLAST of CF832564 vs. ExPASy Swiss-Prot
Match: RL30_TRYBB (60S ribosomal protein L30 OS=Trypanosoma brucei brucei GN=RPL30 PE=3 SV=1) HSP 1 Score: 125.561 bits (314), Expect = 1.933e-28 Identity = 55/93 (59.14%), Postives = 74/93 (79.57%), Query Frame = 3 Query: 171 ESINNRLALVMKSGKYTLGYKTVLRSLRSSKGKLILLSNNCPPLRKSEIEYYAMLAKVGVHHYNGNNVDLGTACGKYFRVSCLSIIDPGDSDI 449 ++IN ++ LVMKSGKY LG + L++LR + KL+++S NCPP+RK+EIEYY L+K +HHY+GNN+DLGTACG++FR LSI D GDSDI Sbjct: 10 DTINTKIQLVMKSGKYVLGTQQSLKTLRQGRSKLVVISANCPPIRKAEIEYYCTLSKTPIHHYSGNNLDLGTACGRHFRACVLSITDVGDSDI 102
BLAST of CF832564 vs. ExPASy Swiss-Prot
Match: RL30_YEAST (60S ribosomal protein L30 OS=Saccharomyces cerevisiae GN=RPL30 PE=1 SV=3) HSP 1 Score: 123.635 bits (309), Expect = 7.344e-28 Identity = 59/97 (60.82%), Postives = 78/97 (80.41%), Query Frame = 3 Query: 171 ESINNRLALVMKSGKYTLGYKTVLRSLRSSKGKLILLSNNCPPLRKSEIEYYAMLAKVGVHHYNGNNVDLGTACGKYFRVSCLSIIDPGDSDIIKSL 461 ESIN +LALV+KSGKYTLGYK+ ++SLR K KLI+++ N P LRKSE+EYYAML+K V+++ G N +LGTA GK FRV +SI++ GDSDI+ +L Sbjct: 8 ESINQKLALVIKSGKYTLGYKSTVKSLRQGKSKLIIIAANTPVLRKSELEYYAMLSKTKVYYFQGGNNELGTAVGKLFRVGVVSILEAGDSDILTTL 104
BLAST of CF832564 vs. ExPASy Swiss-Prot
Match: RL30_YARLI (60S ribosomal protein L30 OS=Yarrowia lipolytica GN=RPL30 PE=3 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 7.344e-28 Identity = 54/94 (57.45%), Postives = 75/94 (79.79%), Query Frame = 3 Query: 171 ESINNRLALVMKSGKYTLGYKTVLRSLRSSKGKLILLSNNCPPLRKSEIEYYAMLAKVGVHHYNGNNVDLGTACGKYFRVSCLSIIDPGDSDII 452 +++N +L L +KSGKYTLGYK+ +++LR K KL++++ N P LRKSEIEYYAMLAK VHH+ G N +LGT+CG+ FRV ++I+D GDSDI+ Sbjct: 11 DNVNAKLGLAIKSGKYTLGYKSTIKALRQGKAKLVIIAGNTPALRKSEIEYYAMLAKCTVHHFQGGNNELGTSCGRLFRVGAVTIMDAGDSDIL 104
BLAST of CF832564 vs. ExPASy Swiss-Prot
Match: RL30_CANGA (60S ribosomal protein L30 OS=Candida glabrata GN=RPL30 PE=3 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 7.344e-28 Identity = 58/97 (59.79%), Postives = 78/97 (80.41%), Query Frame = 3 Query: 171 ESINNRLALVMKSGKYTLGYKTVLRSLRSSKGKLILLSNNCPPLRKSEIEYYAMLAKVGVHHYNGNNVDLGTACGKYFRVSCLSIIDPGDSDIIKSL 461 ESIN +LALV+KSGK+TLGYK+ ++SLR K KLI+++ N P LRKSE+EYYAML+K V+++ G N +LGTA GK FRV +S++D GDSDI+ +L Sbjct: 8 ESINQKLALVVKSGKFTLGYKSTIKSLRQGKSKLIIIAANTPVLRKSELEYYAMLSKTKVYYFQGGNNELGTAVGKLFRVGVVSVLDAGDSDILTAL 104
BLAST of CF832564 vs. ExPASy Swiss-Prot
Match: RL30_ASHGO (60S ribosomal protein L30 OS=Ashbya gossypii GN=RPL30 PE=3 SV=3) HSP 1 Score: 122.865 bits (307), Expect = 1.253e-27 Identity = 57/97 (58.76%), Postives = 78/97 (80.41%), Query Frame = 3 Query: 171 ESINNRLALVMKSGKYTLGYKTVLRSLRSSKGKLILLSNNCPPLRKSEIEYYAMLAKVGVHHYNGNNVDLGTACGKYFRVSCLSIIDPGDSDIIKSL 461 E+IN +LALV+KSGKYTLGYK+ ++SLR K KLI+++ N P LRKSE+EYYAML+K V+++ G N +LGTA GK FRV ++++D GDSDI+ +L Sbjct: 8 ENINQKLALVIKSGKYTLGYKSTIKSLRQGKAKLIIIAANTPVLRKSELEYYAMLSKTKVYYFQGGNNELGTAVGKLFRVGVVTVLDAGDSDILTTL 104
BLAST of CF832564 vs. ExPASy Swiss-Prot
Match: RL30_LEIMA (60S ribosomal protein L30 OS=Leishmania major GN=RPL30 PE=3 SV=1) HSP 1 Score: 121.709 bits (304), Expect = 2.791e-27 Identity = 53/92 (57.61%), Postives = 72/92 (78.26%), Query Frame = 3 Query: 174 SINNRLALVMKSGKYTLGYKTVLRSLRSSKGKLILLSNNCPPLRKSEIEYYAMLAKVGVHHYNGNNVDLGTACGKYFRVSCLSIIDPGDSDI 449 +IN +L LVMKSGKY LG + L +LR + KL++++NNCPP+R++E+EYY L+K +HHY+GNN+DLGTACGK FR LS+ + GDSDI Sbjct: 11 TINAKLQLVMKSGKYVLGTQQALTTLRQGRSKLVVIANNCPPIRRAEVEYYCTLSKTPIHHYSGNNLDLGTACGKPFRTCVLSVTNVGDSDI 102
BLAST of CF832564 vs. ExPASy Swiss-Prot
Match: RL30_KLULA (60S ribosomal protein L30 OS=Kluyveromyces lactis GN=RPL30 PE=3 SV=2) HSP 1 Score: 121.324 bits (303), Expect = 3.645e-27 Identity = 57/97 (58.76%), Postives = 78/97 (80.41%), Query Frame = 3 Query: 171 ESINNRLALVMKSGKYTLGYKTVLRSLRSSKGKLILLSNNCPPLRKSEIEYYAMLAKVGVHHYNGNNVDLGTACGKYFRVSCLSIIDPGDSDIIKSL 461 E+IN +LALV+KSGKY+LGYK+ ++SLR K KLI+++ N P LRKSE+EYYAML+K V+++ G N +LGTA GK FRV ++I+D GDSDI+ +L Sbjct: 8 ENINQKLALVVKSGKYSLGYKSTVKSLRQGKAKLIIIAANTPVLRKSELEYYAMLSKTKVYYFQGGNNELGTAVGKLFRVGVVTILDAGDSDILTAL 104
BLAST of CF832564 vs. ExPASy Swiss-Prot
Match: RL30E_METTH (50S ribosomal protein L30e OS=Methanobacterium thermoautotrophicum GN=rpl30e PE=3 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 3.200e-15 Identity = 38/93 (40.86%), Postives = 62/93 (66.67%), Query Frame = 3 Query: 177 INNRLALVMKSGKYTLGYKTVLRSLRSSKGKLILLSNNCPPLRKSEIEYYAMLAKVGVHHYNGNNVDLGTACGKYFRVSCLSIIDPGDSDIIK 455 I+ + + + +G LG K ++SL+ KGKL+++++N P K +IEYYA L+++ V+ + G +V+LG+ CGK F V L I DPGDS I++ Sbjct: 3 IDRGIRVAVDTGNVILGSKRTIQSLKLGKGKLVVMASNIPEDLKEDIEYYAKLSEIPVYTHEGTSVELGSVCGKPFTVGALLIQDPGDSTILE 95 The following BLAST results are available for this feature:
BLAST of CF832564 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 50
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Sequences
The
following sequences are available for this feature:
EST sequence >CF832564 ID=CF832564; Name=CF832564; organism=Citrus sinensis; type=EST; length=600bpback to top |