CF832589
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF832589 vs. ExPASy Swiss-Prot
Match: CHIB_MAIZE (Endochitinase B (Fragment) OS=Zea mays PE=1 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 3.268e-24 Identity = 54/138 (39.13%), Postives = 79/138 (57.25%), Query Frame = 1 Query: 226 CPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFAQTGHETTGGWTDAPGGEYAWGYCYIRQVSPASS--DXXXXXXXXXLPGQYYGRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWM 633 C + FYT AF+ A + +PGF + G++ KREIAAFFA HET +CYI +++ +++ D +YYGRGP+Q++WN NY G A+G D L +P +A D V++FK+A+WFWM Sbjct: 89 CEGKNFYTRSAFLSAVKGYPGFAHGGSQVQGKREIAAFFAHATHETGH-------------FCYISEINKSNAYCDPTKRQWPCAAGQKYYGRGPLQISWNYNYGPAGRAIGFDGLGDPGRVARDAVVAFKAALWFWM 213
BLAST of CF832589 vs. ExPASy Swiss-Prot
Match: CHI4_ORYSJ (Chitinase 4 OS=Oryza sativa subsp. japonica GN=Cht4 PE=2 SV=2) HSP 1 Score: 110.153 bits (274), Expect = 9.509e-24 Identity = 57/139 (41.01%), Postives = 78/139 (56.12%), Query Frame = 1 Query: 226 CPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFAQTGHETTGGWTDAPGGEYAWGYCYIRQVSPASSDXXXXXXXXX--LPGQ-YYGRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWM 633 C + FYT +F+ AA+++ GF N KREIAAFFA HET CYI +++ A+ D PG+ YYGRGP+Q++WN NY G+ +G D L +PD +A DP +SFK+A+WFWM Sbjct: 104 CAGKSFYTRQSFLNAARSYSGFANDRTNDDSKREIAAFFAHVTHETGH-------------MCYINEINGANMDYCDKSNKQWPCQPGKKYYGRGPLQISWNFNYGPAGKNIGFDGLRDPDKVAQDPTISFKTALWFWM 229
BLAST of CF832589 vs. ExPASy Swiss-Prot
Match: CHIA_MAIZE (Endochitinase A OS=Zea mays PE=1 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 2.118e-23 Identity = 54/138 (39.13%), Postives = 78/138 (56.52%), Query Frame = 1 Query: 226 CPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFAQTGHETTGGWTDAPGGEYAWGYCYIRQVSPASS--DXXXXXXXXXLPGQYYGRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWM 633 C + FYT AF+ A A+PGF + G E KREIAAFFA HET +CYI +++ +++ D +YYGRGP+Q++WN NY G +G + L +P+ +A D V++FK+A+WFWM Sbjct: 100 CEGKNFYTRSAFLSAVNAYPGFAHGGTEVEGKREIAAFFAHVTHETGH-------------FCYISEINKSNAYCDASNRQWPCAAGQKYYGRGPLQISWNYNYGPAGRDIGFNGLADPNRVAQDAVIAFKTALWFWM 224
BLAST of CF832589 vs. ExPASy Swiss-Prot
Match: CHI5_ORYSJ (Chitinase 5 OS=Oryza sativa subsp. japonica GN=Cht5 PE=2 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 2.118e-23 Identity = 57/139 (41.01%), Postives = 76/139 (54.68%), Query Frame = 1 Query: 226 CPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFAQTGHETTGGWTDAPGGEYAWGYCYIRQVSPASSDXXXXXXXXX--LPGQ-YYGRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWM 633 C + FYT +F+ AA ++ GF KREIAAFFA HET CYI +++ AS D PG+ YYGRGP+Q++WN NY G+ +G D L +PD +A DP +SFK+A+WFWM Sbjct: 107 CAGKNFYTRQSFLNAAHSYSGFARDRTNDDSKREIAAFFAHVTHETGH-------------MCYINEINGASMDYCDKNNKQWPCQPGKKYYGRGPLQISWNYNYGPAGQNIGFDGLRDPDRVAQDPTISFKTALWFWM 232
BLAST of CF832589 vs. ExPASy Swiss-Prot
Match: CHI4_PHAVU (Endochitinase PR4 OS=Phaseolus vulgaris GN=CHI4 PE=2 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 3.059e-22 Identity = 57/143 (39.86%), Postives = 75/143 (52.45%), Query Frame = 1 Query: 217 DARCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFAQTGHETTGGWTDAPGGEYAWGYCYIRQVSPASSDXXXXXXXXXLPGQ----YYGRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWM 633 D+ C + FYT DAF+ A ++ FG G+E KREIAA FA HET +CYI ++ AS D P Y+GRGPIQL+WN NY G A D L P+ ++ D V+SFK+A+W+WM Sbjct: 85 DSGCAGKNFYTRDAFLSALNSYTDFGRVGSEDDSKREIAAAFAHFTHETGH-------------FCYIEEIDGASKDYCDEESIAQYPCSSSKGYHGRGPIQLSWNFNYGPAGSANNFDGLGAPETVSNDVVVSFKTALWYWM 214 The following BLAST results are available for this feature:
BLAST of CF832589 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 55
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Sequences
The
following sequences are available for this feature:
EST sequence >CF832589 ID=CF832589; Name=CF832589; organism=Citrus sinensis; type=EST; length=636bpback to top |