CF832590
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF832590 vs. ExPASy Swiss-Prot
Match: RL10A_RAT (60S ribosomal protein L10a OS=Rattus norvegicus GN=Rpl10a PE=1 SV=2) HSP 1 Score: 90.8929 bits (224), Expect = 2.273e-18 Identity = 39/65 (60.00%), Postives = 54/65 (83.08%), Query Frame = -2 Query: 234 ATVKFQLKKVLCMGVAVGNLSMEEKQIFQNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGPSNRIF 428 +T+KFQ+KKVLC+ VAVG++ M + ++ N+ ++VNFLVSLLKKNWQNVR LY+KSTMG R++ Sbjct: 153 STIKFQMKKVLCLAVAVGHVKMTDDELVYNIHLAVNFLVSLLKKNWQNVRALYIKSTMGKPQRLY 217
BLAST of CF832590 vs. ExPASy Swiss-Prot
Match: RL10A_MOUSE (60S ribosomal protein L10a OS=Mus musculus GN=Rpl10a PE=1 SV=3) HSP 1 Score: 90.8929 bits (224), Expect = 2.273e-18 Identity = 39/65 (60.00%), Postives = 54/65 (83.08%), Query Frame = -2 Query: 234 ATVKFQLKKVLCMGVAVGNLSMEEKQIFQNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGPSNRIF 428 +T+KFQ+KKVLC+ VAVG++ M + ++ N+ ++VNFLVSLLKKNWQNVR LY+KSTMG R++ Sbjct: 153 STIKFQMKKVLCLAVAVGHVKMTDDELVYNIHLAVNFLVSLLKKNWQNVRALYIKSTMGKPQRLY 217
BLAST of CF832590 vs. ExPASy Swiss-Prot
Match: RL10A_HUMAN (60S ribosomal protein L10a OS=Homo sapiens GN=RPL10A PE=1 SV=2) HSP 1 Score: 90.8929 bits (224), Expect = 2.273e-18 Identity = 39/65 (60.00%), Postives = 54/65 (83.08%), Query Frame = -2 Query: 234 ATVKFQLKKVLCMGVAVGNLSMEEKQIFQNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGPSNRIF 428 +T+KFQ+KKVLC+ VAVG++ M + ++ N+ ++VNFLVSLLKKNWQNVR LY+KSTMG R++ Sbjct: 153 STIKFQMKKVLCLAVAVGHVKMTDDELVYNIHLAVNFLVSLLKKNWQNVRALYIKSTMGKPQRLY 217
BLAST of CF832590 vs. ExPASy Swiss-Prot
Match: RL10A_DICDI (60S ribosomal protein L10a OS=Dictyostelium discoideum GN=rpl10a PE=3 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 2.273e-18 Identity = 38/65 (58.46%), Postives = 56/65 (86.15%), Query Frame = -2 Query: 234 ATVKFQLKKVLCMGVAVGNLSMEEKQIFQNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGPSNRIF 428 +TVKFQLKKVLC+ VAVG++ + E+++ N+ S+NFLVSLLKK WQN++ LY+K++MGPS+R++ Sbjct: 153 STVKFQLKKVLCLAVAVGHIELTEREVATNIIQSINFLVSLLKKGWQNIKTLYVKTSMGPSHRVY 217
BLAST of CF832590 vs. ExPASy Swiss-Prot
Match: RL10A_CANGA (60S ribosomal protein L10a OS=Candida glabrata GN=RPL10A PE=3 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 2.273e-18 Identity = 42/65 (64.62%), Postives = 53/65 (81.54%), Query Frame = -2 Query: 234 ATVKFQLKKVLCMGVAVGNLSMEEKQIFQNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGPSNRIF 428 +T+KFQLKKVLC+ VAVGN+ M+E + + MSVNFLVSLLKKNWQNV L +KSTMGP+ R++ Sbjct: 153 STIKFQLKKVLCLAVAVGNVEMDEDTLVNQILMSVNFLVSLLKKNWQNVGSLVIKSTMGPAFRLY 217
BLAST of CF832590 vs. ExPASy Swiss-Prot
Match: RL10A_BOVIN (60S ribosomal protein L10a OS=Bos taurus GN=RPL10A PE=2 SV=3) HSP 1 Score: 90.8929 bits (224), Expect = 2.273e-18 Identity = 39/65 (60.00%), Postives = 54/65 (83.08%), Query Frame = -2 Query: 234 ATVKFQLKKVLCMGVAVGNLSMEEKQIFQNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGPSNRIF 428 +T+KFQ+KKVLC+ VAVG++ M + ++ N+ ++VNFLVSLLKKNWQNVR LY+KSTMG R++ Sbjct: 153 STIKFQMKKVLCLAVAVGHVKMTDDELVYNIHLAVNFLVSLLKKNWQNVRALYIKSTMGKPQRLY 217
BLAST of CF832590 vs. ExPASy Swiss-Prot
Match: RL10A_ASHGO (60S ribosomal protein L10a OS=Ashbya gossypii GN=RPL10A PE=3 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 2.273e-18 Identity = 42/65 (64.62%), Postives = 53/65 (81.54%), Query Frame = -2 Query: 234 ATVKFQLKKVLCMGVAVGNLSMEEKQIFQNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGPSNRIF 428 +T+KFQLKKVLC+ VAVGN+ M+E + + MSVNFLVSLLKKNWQNV L +KSTMGP+ R++ Sbjct: 153 STIKFQLKKVLCLAVAVGNVEMDEDTLVNQILMSVNFLVSLLKKNWQNVGSLVIKSTMGPAFRLY 217
BLAST of CF832590 vs. ExPASy Swiss-Prot
Match: RL10A_ICTPU (60S ribosomal protein L10a OS=Ictalurus punctatus GN=rpl10a PE=2 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 2.969e-18 Identity = 39/65 (60.00%), Postives = 54/65 (83.08%), Query Frame = -2 Query: 234 ATVKFQLKKVLCMGVAVGNLSMEEKQIFQNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGPSNRIF 428 +T+KFQ+KKVLC+ VAVG++ M E ++ N+ ++VNFLVSLLKKNWQNVR LY+KS+MG R++ Sbjct: 152 STIKFQMKKVLCLAVAVGHVRMSEDELVYNIHLAVNFLVSLLKKNWQNVRALYIKSSMGKPQRLY 216
BLAST of CF832590 vs. ExPASy Swiss-Prot
Match: RL10A_MACFA (60S ribosomal protein L10a OS=Macaca fascicularis GN=RPL10A PE=2 SV=3) HSP 1 Score: 89.7373 bits (221), Expect = 5.064e-18 Identity = 38/65 (58.46%), Postives = 54/65 (83.08%), Query Frame = -2 Query: 234 ATVKFQLKKVLCMGVAVGNLSMEEKQIFQNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGPSNRIF 428 +T+KFQ+K+VLC+ VAVG++ M + ++ N+ ++VNFLVSLLKKNWQNVR LY+KSTMG R++ Sbjct: 153 STIKFQMKRVLCLAVAVGHVKMTDDELVYNIHLAVNFLVSLLKKNWQNVRALYIKSTMGKPQRLY 217
BLAST of CF832590 vs. ExPASy Swiss-Prot
Match: RL10A_CAEEL (60S ribosomal protein L10a OS=Caenorhabditis elegans GN=rpl-10a PE=1 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 5.064e-18 Identity = 39/65 (60.00%), Postives = 54/65 (83.08%), Query Frame = -2 Query: 234 ATVKFQLKKVLCMGVAVGNLSMEEKQIFQNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGPSNRIF 428 ATVKFQ+KKVLC+ VAVG++ + ++++ N+ +S+NFLVSLLKKNWQNVR L +KSTMG R++ Sbjct: 152 ATVKFQMKKVLCLSVAVGHVGLTQEELVSNISLSINFLVSLLKKNWQNVRSLNIKSTMGKPQRVY 216 The following BLAST results are available for this feature:
BLAST of CF832590 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 24
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CF832590 ID=CF832590; Name=CF832590; organism=Citrus sinensis; type=EST; length=429bpback to top |