CF832594

Overview
NameCF832594
Unique NameCF832594
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length658
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF832594 vs. ExPASy Swiss-Prot
Match: SAHH_PYRAB (Adenosylhomocysteinase OS=Pyrococcus abyssi GN=ahcY PE=3 SV=1)

HSP 1 Score: 162.155 bits (409), Expect = 2.226e-39
Identity = 94/213 (44.13%), Postives = 126/213 (59.15%), Query Frame = 2
Query:    2 TTGALRLYQMQENGTLLFPAINVNDSVTKSKFDNLYGCRHSLPDGLMRATDVMIAGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQVLTLEDVVSDADIFVTTTGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDMLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIA 640
            TTG +RL  M+ +  L FP I VNDS  K  FDN YG   S  DG+MRAT++++AGK  VV GYG  G+G A   +  GA VIV E+DPI AL+A M+G  V+++++     DIFVT TGN   I  +H + MK+ AI+ N GHFD EI    LE    V+    +P    +   +    + +LA+GRL+NL  A GHP+ +M  SF  Q  A
Sbjct:  156 TTGVIRLRAMERDKVLRFPVIAVNDSYMKYLFDNRYGTGQSTWDGIMRATNLLVAGKNVVVVGYGWCGRGIAMRARGLGATVIVVEVDPIKALEARMDGFLVMSMKEAAKIGDIFVTATGNIKCIRREHFELMKDGAIMANAGHFDVEIWKPDLEEL-AVEISNPRPNVTEYKLKD-GRRLYLLADGRLVNLVAADGHPAEIMDMSFALQAKA 366          
BLAST of CF832594 vs. ExPASy Swiss-Prot
Match: SAHH_PYRHO (Adenosylhomocysteinase OS=Pyrococcus horikoshii GN=ahcY PE=3 SV=2)

HSP 1 Score: 159.458 bits (402), Expect = 1.443e-38
Identity = 93/213 (43.66%), Postives = 125/213 (58.69%), Query Frame = 2
Query:    2 TTGALRLYQMQENGTLLFPAINVNDSVTKSKFDNLYGCRHSLPDGLMRATDVMIAGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQVLTLEDVVSDADIFVTTTGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDMLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIA 640
            TTG +RL  M+ +G L F  I VNDS  K  FDN YG   S  DG+MRAT+++IAGK  VV GYG  G+G A   +  GA VIV E+DPI AL+A M+G  V+ +++     DIF+T TG+   I  +H + MK+ AI+ N GHFD EI    LE    V+    +P    +   +    + +LA+GRL+NL  A GHP+ +M  SF  Q  A
Sbjct:  155 TTGVIRLRAMERDGVLRFSVIAVNDSYMKYLFDNRYGTGQSTWDGVMRATNLLIAGKNVVVVGYGWCGRGIAMRARGLGATVIVVEVDPIKALEARMDGFLVMNMKEAAKIGDIFITATGDIKCIRREHFELMKDGAIMANAGHFDVEIWKPDLEEL-AVEISNPRPNVTEYKLKD-GRRLYLLADGRLVNLVAADGHPAEIMDMSFALQAKA 365          
BLAST of CF832594 vs. ExPASy Swiss-Prot
Match: SAHH_HALWD (Adenosylhomocysteinase OS=Haloquadratum walsbyi (strain DSM 16790) GN=achY PE=3 SV=1)

HSP 1 Score: 142.895 bits (359), Expect = 1.397e-33
Identity = 89/224 (39.73%), Postives = 121/224 (54.02%), Query Frame = 2
Query:    2 TTGALRLYQMQENGTLLFPAINVNDSVTKSKFDNLYGCRHSLPDGLMRATDVMIAGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQVLTLEDVVSDADIFVTTTGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDM-----LGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGC--ATGHPSFVMSCSFTNQVIAQLEL 652
            TTG  RL  M E+  L +P   VND+  K  FDN++G   S    +   T++  AGK  VV GYG  GKG A       A VIVTE++P  AL+A MEG +V+ + +  +  D+FVTTTGN+D+I  +  + M + AI+ N GHFD EI++     L ++TY     +      D          + VLAEGRL+NL    A GHP+ VM  SF  Q +   EL
Sbjct:  164 TTGVHRLRAMDEDDELQYPVFAVNDTPMKRLFDNVHGTGESALATIAMTTNLSYAGKNVVVAGYGYCGKGVAQKAAGQNANVIVTEVEPRRALEAHMEGYEVMPMNEAATRGDVFVTTTGNRDVITQEDFEVMSDGAILANAGHFDVEINLEELSELAIDTYEARDGVQAYELGD-------GRRLNVLAEGRLVNLAAPIALGHPAEVMDQSFGIQAVCVREL 380          
BLAST of CF832594 vs. ExPASy Swiss-Prot
Match: SAHH_HALSA (Adenosylhomocysteinase OS=Halobacterium salinarium GN=ahcY PE=3 SV=1)

HSP 1 Score: 134.035 bits (336), Expect = 6.491e-31
Identity = 84/227 (37.00%), Postives = 117/227 (51.54%), Query Frame = 2
Query:    2 TTGALRLYQMQENGTLLFPAINVNDSVTKSKFDNLYGCRHSLPDGLMRATDVMIAGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQVLTLEDVVSDADIFVTTTGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDMLGL--------ETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLG--CATGHPSFVMSCSFTNQVIAQLEL 652
            TTG  RL  M ++  L +P   VND+  K  FDN++G   S    +   T++  AGK  VV GYGD G+G A       A VIVTE++P  AL+A MEG  V+ + +     D+F+TTTGNK++I   H ++M +  ++ N GHFD E+++  L        E   GV+   +               + VLAEGRL+NL      GHP  VM  SF  Q +   EL
Sbjct:  159 TTGVHRLRAMDDDDALEYPVFAVNDTPMKRLFDNVHGTGESALANIAMTTNLSWAGKDVVVAGYGDCGRGVAKKAAGQNANVIVTEVEPRRALEAHMEGYDVMPMAEAAEVGDVFLTTTGNKNVITRAHFERMDDGVVLANAGHFDVEVNLDHLSELAVSEREAREGVREYEL----------ADGRRLNVLAEGRLVNLASPIGLGHPVGVMDQSFGVQAVCVREL 375          
BLAST of CF832594 vs. ExPASy Swiss-Prot
Match: SAHH_STRFR (Adenosylhomocysteinase (Fragment) OS=Streptomyces fradiae GN=ahcY PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 2.319e-12
Identity = 35/61 (57.38%), Postives = 45/61 (73.77%), Query Frame = 2
Query:  473 PGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELW 655
            PG+ +  +KPQ   W F +    IIVL+EGRL+NLG ATGHPSFVMS SF +Q +AQ+EL+
Sbjct:    2 PGIVKDEVKPQVHTWTFADGKK-IIVLSEGRLLNLGNATGHPSFVMSNSFADQTLAQIELY 61          
The following BLAST results are available for this feature:
BLAST of CF832594 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 245
Match NameE-valueIdentityDescription
SAHH_PYRAB2.226e-3944.13Adenosylhomocysteinase OS=Pyrococcus abyssi GN=ahc... [more]
SAHH_PYRHO1.443e-3843.66Adenosylhomocysteinase OS=Pyrococcus horikoshii GN... [more]
SAHH_HALWD1.397e-3339.73Adenosylhomocysteinase OS=Haloquadratum walsbyi (s... [more]
SAHH_HALSA6.491e-3137.00Adenosylhomocysteinase OS=Halobacterium salinarium... [more]
SAHH_STRFR2.319e-1257.38Adenosylhomocysteinase (Fragment) OS=Streptomyces ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_02B18_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa02B18, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832594 ID=CF832594; Name=CF832594; organism=Citrus sinensis; type=EST; length=658bp
CACGACCGGTGCCTTGAGATTGTACCAGATGCAAGAAAATGGAACCCTCT
TGTTCCCTGCCATCAATGTCAATGACTCTGTCACCAAGAGCAAGTTTGAT
AACTTGTATGGATGCCGCCACTCGCTCCCAGATGGTTTGATGAGAGCTAC
TGATGTTATGATTGCCGGAAAGGTTGCTGTTGTTTGCGGTTATGGTGATG
TTGGCAAGGGTTGTGCTGCTGCTTTGAAGCAAGCCGGTGCGCGTGTAATT
GTTACCGAGATTGATCCAATTTGCGCTCTCCAGGCTCTTATGGAGGGTCT
TCAAGTCCTAACCCTTGAGGACGTCGTCTCCGATGCTGACATCTTTGTTA
CCACCACCGGTAACAAGGACATCATCATGGTTGACCACATGAAGAAGATG
AAGAACAATGCAATTGTTTGCAACATTGGTCACTTTGATAATGAAATTGA
TATGCTCGGTCTTGAGACCTACCCGGGTGTTAAGCGCATTACCATCAAGC
CCCAAACTGATAGGTGGGTCTTCCCGGAGACCAACTCAGGCATCATCGTG
TTGGCTGAGGGACGTCTCATGAACTTGGGATGTGCCACTGGACACCCCAG
CTTTGTGATGTCCTGCTCCTTCACCAACCAGGTGATTGCCCAGCTTGAGC
TCTGGAAG
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