CF832596
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF832596 vs. ExPASy Swiss-Prot
Match: RL9_PONAB (60S ribosomal protein L9 OS=Pongo abelii GN=RPL9 PE=2 SV=1) HSP 1 Score: 217.238 bits (552), Expect = 6.160e-56 Identity = 112/192 (58.33%), Postives = 137/192 (71.35%), Query Frame = 3 Query: 6 TILSSETMEIPEGVKVKINAKIIEVEGPRGKLSRNFKHLNLDFHLMTDGETGKRRLKIDAWFGSRKTSAAIRTALSHVQNLITGVTKGYRYKMRFVYAHFPINASIANADKSIEIRNFLGEKKVRRVEMLDGVTVLRSDKVKDELILDGNDIELVSRSAALINQKCHVKNKDIRKFLDGIYVSEKGTIVGED 581 TILS++T++IPE V + + + + V+GPRG L R+F H+N++ L+ K+RL++D W+G+RK A +RT SHVQN+I GVT G+RYKMR VYAHFPIN I +EIRNFLGEK +RRV M GV S KDELIL GNDIELVS SAALI Q VKNKDIRKFLDGIYVSEKGT+ D Sbjct: 3 TILSNQTVDIPENVDITLKGRTVIVKGPRGTLRRDFNHINVELSLLGKK---KKRLRVDEWWGNRKELATVRTICSHVQNMIKGVTLGFRYKMRSVYAHFPINVVIQENGSLVEIRNFLGEKYIRRVRMRPGVACSVSQAQKDELILGGNDIELVSNSAALIQQATTVKNKDIRKFLDGIYVSEKGTVQQAD 191
BLAST of CF832596 vs. ExPASy Swiss-Prot
Match: RL9_SPOFR (60S ribosomal protein L9 OS=Spodoptera frugiperda GN=RpL9 PE=2 SV=1) HSP 1 Score: 216.468 bits (550), Expect = 1.051e-55 Identity = 107/187 (57.22%), Postives = 140/187 (74.87%), Query Frame = 3 Query: 9 ILSSETMEIPEGVKVKINAKIIEVEGPRGKLSRNFKHLNLDFHLMTDGETGKRRLKIDAWFGSRKTSAAIRTALSHVQNLITGVTKGYRYKMRFVYAHFPINASIANADKSIEIRNFLGEKKVRRVEMLDGVTVLRSDKVKDELILDGNDIELVSRSAALINQKCHVKNKDIRKFLDGIYVSEKGTI 569 I++++ ++IPEG+ V + ++++ V+GPRG L RNFKHL +D ++ R LK++ WFGS+K AA+RT SHV+N+I GVTKG++YKMR VYAHFPIN + IEIRNFLGEK +RRV+M GVTV+ S K KDELI++GN +E VS SAALI Q VKNKDIRKFLDG+YVSEK T+ Sbjct: 4 IVANQKVKIPEGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNP-----RVLKVEKWFGSKKELAAVRTVCSHVENMIKGVTKGFQYKMRSVYAHFPINCVTTEGNSVIEIRNFLGEKYIRRVKMAPGVTVVNSPKQKDELIIEGNSLEDVSSSAALIQQSTTVKNKDIRKFLDGLYVSEKTTV 185
BLAST of CF832596 vs. ExPASy Swiss-Prot
Match: RL9_DROME (60S ribosomal protein L9 OS=Drosophila melanogaster GN=RpL9 PE=1 SV=2) HSP 1 Score: 213.772 bits (543), Expect = 6.811e-55 Identity = 107/189 (56.61%), Postives = 139/189 (73.54%), Query Frame = 3 Query: 6 TILSSETMEIPEGVKVKINAKIIEVEGPRGKLSRNFKHLNLDFHLMTDGETGKRRLKIDAWFGSRKTSAAIRTALSHVQNLITGVTKGYRYKMRFVYAHFPINASIANADKSIEIRNFLGEKKVRRVEMLDGVTVLRSDKVKDELILDGNDIELVSRSAALINQKCHVKNKDIRKFLDGIYVSEKGTIV 572 TI S++ ++IP+ +K + A+++ + G RG L R+FKHL LD ++ KR LK++ WFG++K AA+RT SH++N+I GVT G++YKMR VYAHFPIN + + IEIRNFLGEK +RRVEM GVTV+ S KDELI++GNDIE VS SAALI Q VKNKDIRKFLDG+YVSEK T+V Sbjct: 3 TINSNQCVKIPKDIKASVKARVVTITGTRGTLKRSFKHLALDMYM-----PDKRTLKVEKWFGTKKELAAVRTVCSHIENMIKGVTFGFQYKMRAVYAHFPINCVTSENNTVIEIRNFLGEKYIRRVEMAPGVTVVNSTAQKDELIVEGNDIESVSGSAALIQQSTTVKNKDIRKFLDGLYVSEKTTVV 186
BLAST of CF832596 vs. ExPASy Swiss-Prot
Match: RL9_DICDI (60S ribosomal protein L9 OS=Dictyostelium discoideum GN=rpl9 PE=1 SV=2) HSP 1 Score: 209.149 bits (531), Expect = 1.678e-53 Identity = 98/187 (52.41%), Postives = 137/187 (73.26%), Query Frame = 3 Query: 9 ILSSETMEIPEGVKVKINAKIIEVEGPRGKLSRNFKHLNLDFHLMTDGETGKRRLKIDAWFGSRKTSAAIRTALSHVQNLITGVTKGYRYKMRFVYAHFPINASIANADKSIEIRNFLGEKKVRRVEMLDGVTVLRSDKVKDELILDGNDIELVSRSAALINQKCHVKNKDIRKFLDGIYVSEKGTI 569 I SS ++IPE V V + + ++V GPRG LS++F H ++D +L+ GK+ L +D WFG+RK A I+T S ++N+ITGVTKGY YKMRFVYAHFPIN ++ + + +EIRNF GEK VRR+E+LDG+T R++K KDE++L GN +EL+S+S A I + +K KD+RKFLDGIYVSE+ + Sbjct: 4 INSSRKVQIPENVTVDVKGRSVKVTGPRGTLSKSFDHASVDINLV-----GKKELTVDLWFGNRKQIACIKTITSIIENMITGVTKGYEYKMRFVYAHFPINVAVTDGGRVVEIRNFFGEKIVRRIELLDGITCYRNEKAKDEIVLTGNSLELLSQSCATIQLRSAIKYKDVRKFLDGIYVSERNVL 185
BLAST of CF832596 vs. ExPASy Swiss-Prot
Match: RL9_CAEEL (60S ribosomal protein L9 OS=Caenorhabditis elegans GN=rpl-9 PE=1 SV=1) HSP 1 Score: 199.904 bits (507), Expect = 1.018e-50 Identity = 99/191 (51.83%), Postives = 136/191 (71.20%), Query Frame = 3 Query: 9 ILSSETMEIPEGVKVKINAKIIEVEGPRGKLSRNFKHLNLDFHLMTDGETGKRRLKIDAWFGSRKTSAAIRTALSHVQNLITGVTKGYRYKMRFVYAHFPINASIANADKSIEIRNFLGEKKVRRVEMLDGVTVLRSDKVKDELILDGNDIELVSRSAALINQKCHVKNKDIRKFLDGIYVSEKGTIVGED 581 I S++T+ PEGV + +I+ V GPRG + ++F+HL+++ + GK L++ WFG RK AAIRT SH++N+I GVT G+RYKMR VYAHFPIN ++ + ++++EIRNFLGEK VRRV + +GV S KDE++++GND++ VS++AA I Q VK KDIRKFLDGIYVSEK TIV D Sbjct: 4 IESNDTVVFPEGVTFTVKNRIVHVTGPRGTIRKDFRHLHMEMERI-----GKSTLRVRKWFGVRKELAAIRTVCSHIKNMIKGVTVGFRYKMRSVYAHFPINVTLQDGNRTVEIRNFLGEKIVRRVPLPEGVIATISTAQKDEIVVEGNDVQFVSQAAARIQQSTAVKEKDIRKFLDGIYVSEKTTIVPTD 189
BLAST of CF832596 vs. ExPASy Swiss-Prot
Match: RL9B_YEAST (60S ribosomal protein L9-B OS=Saccharomyces cerevisiae GN=RPL9B PE=1 SV=1) HSP 1 Score: 199.519 bits (506), Expect = 1.329e-50 Identity = 103/190 (54.21%), Postives = 136/190 (71.58%), Query Frame = 3 Query: 9 ILSSETMEIPEGVKVKINAKIIEVEGPRGKLSRNFKHLNLDFHLMTDGETGKRRLKIDAWFGSRKTSAAIRTALSHVQNLITGVTKGYRYKMRFVYAHFPINASIANAD--KSIEIRNFLGEKKVRRVEMLDGVTVLRSDKVKDELILDGNDIELVSRSAALINQKCHVKNKDIRKFLDGIYVSEKGTIV 572 I + + +EIPEGV V I ++I++V GPRG L++N KH+++ F + + +K+ G RK AA+RT S V N+ITGVTKGY+YKMR+VYAHFPIN +I D K IE+RNFLG+KK+R V + DGVT+ S VKDE++L GN +E VS++AA + Q C V+NKDIRKFLDGIYVS KG IV Sbjct: 4 IQTEQQIEIPEGVTVSIKSRIVKVVGPRGTLTKNLKHIDVTFT-----KVNNQLIKVAVHNGDRKHVAALRTVKSLVDNMITGVTKGYKYKMRYVYAHFPINVNIVEKDGAKFIEVRNFLGDKKIRNVPVRDGVTIEFSTNVKDEIVLSGNSVEDVSQNAADLQQICRVRNKDIRKFLDGIYVSHKGFIV 188
BLAST of CF832596 vs. ExPASy Swiss-Prot
Match: RL9A_YEAST (60S ribosomal protein L9-A OS=Saccharomyces cerevisiae GN=RPL9A PE=1 SV=2) HSP 1 Score: 197.593 bits (501), Expect = 5.051e-50 Identity = 101/189 (53.44%), Postives = 135/189 (71.43%), Query Frame = 3 Query: 9 ILSSETMEIPEGVKVKINAKIIEVEGPRGKLSRNFKHLNLDFHLMTDGETGKRRLKIDAWFGSRKTSAAIRTALSHVQNLITGVTKGYRYKMRFVYAHFPINASIANAD--KSIEIRNFLGEKKVRRVEMLDGVTVLRSDKVKDELILDGNDIELVSRSAALINQKCHVKNKDIRKFLDGIYVSEKGTI 569 I + + +E+PEGV V I ++I++V GPRG L++N KH+++ F + + +K+ G RK AA+RT S V N+ITGVTKGY+YKMR+VYAHFPIN +I D K IE+RNFLG+KK+R V + DGVT+ S VKDE++L GN +E VS++AA + Q C V+NKDIRKFLDGIYVS KG I Sbjct: 4 IQTEQQIEVPEGVTVSIKSRIVKVVGPRGTLTKNLKHIDVTFT-----KVNNQLIKVAVHNGGRKHVAALRTVKSLVDNMITGVTKGYKYKMRYVYAHFPINVNIVEKDGAKFIEVRNFLGDKKIRNVPVRDGVTIEFSTNVKDEIVLSGNSVEDVSQNAADLQQICRVRNKDIRKFLDGIYVSHKGFI 187
BLAST of CF832596 vs. ExPASy Swiss-Prot
Match: RL9B_SCHPO (60S ribosomal protein L9-B OS=Schizosaccharomyces pombe GN=rpl9b PE=2 SV=1) HSP 1 Score: 195.282 bits (495), Expect = 2.507e-49 Identity = 102/187 (54.55%), Postives = 130/187 (69.52%), Query Frame = 3 Query: 9 ILSSETMEIPEGVKVKINAKIIEVEGPRGKLSRNFKHLNLDFHLMTDGETGKRRLKIDAWFGSRKTSAAIRTALSHVQNLITGVTKGYRYKMRFVYAHFPINASIANADKSIEIRNFLGEKKVRRVEMLDGVTVLRSDKVKDELILDGNDIELVSRSAALINQKCHVKNKDIRKFLDGIYVSEKGTI 569 I ET+ IPEGV V I A+++ V+GPRG L +N + + D L G T +K W GSRK +A IRTA S + N+I GVT+G+RYKMR VYAHFPIN ++ +EIRNFLGE+ R ++ L GVTV S VKDE+I++GN +E VS+SAA I Q C+V+NKDIRKFLDGIYVSE+G I Sbjct: 5 IYKDETLTIPEGVSVDIKARLVTVKGPRGVLKQNLRRV--DIELKKQGNT----IKFIVWHGSRKHNACIRTAYSIINNMIIGVTQGFRYKMRLVYAHFPININLTENGTVVEIRNFLGERITRVIKCLPGVTVSISSAVKDEIIIEGNSLENVSQSAANIKQICNVRNKDIRKFLDGIYVSERGNI 185
BLAST of CF832596 vs. ExPASy Swiss-Prot
Match: RL9A_SCHPO (60S ribosomal protein L9-A OS=Schizosaccharomyces pombe GN=rpl9a PE=2 SV=1) HSP 1 Score: 191.045 bits (484), Expect = 4.728e-48 Identity = 100/187 (53.48%), Postives = 128/187 (68.45%), Query Frame = 3 Query: 9 ILSSETMEIPEGVKVKINAKIIEVEGPRGKLSRNFKHLNLDFHLMTDGETGKRRLKIDAWFGSRKTSAAIRTALSHVQNLITGVTKGYRYKMRFVYAHFPINASIANADKSIEIRNFLGEKKVRRVEMLDGVTVLRSDKVKDELILDGNDIELVSRSAALINQKCHVKNKDIRKFLDGIYVSEKGTI 569 I ET+ IP+GV V I A+ + V GPRG L +N +H+ D + G T +K W GSRK +A IR+ S + N+I GVT+G+RYKMR VYAHFPIN ++ +EIRNFLGE+ R ++ L GVTV S VKDE+IL+GN +E VS+SAA I Q C+V+NKDIRKFLDGIYVSE+G I Sbjct: 5 IYKDETLTIPKGVTVDIKARNVTVTGPRGTLKQNLRHV--DIEMKKQGNT----IKFIVWHGSRKHNACIRSVYSIINNMIIGVTQGFRYKMRLVYAHFPININLTENGTVVEIRNFLGERITRVIKCLPGVTVSISSAVKDEIILEGNSLENVSQSAANIKQICNVRNKDIRKFLDGIYVSERGNI 185
BLAST of CF832596 vs. ExPASy Swiss-Prot
Match: RL6_HYPBU (50S ribosomal protein L6P OS=Hyperthermus butylicus (strain DSM 5456 / JCM 9403) GN=rpl6p PE=3 SV=1) HSP 1 Score: 153.295 bits (386), Expect = 1.092e-36 Identity = 81/183 (44.26%), Postives = 125/183 (68.31%), Query Frame = 3 Query: 18 SETMEIPEGVKVKINAKIIEVEGPRGKLSRNFKHLNLDFHLMTDGETGKRRLKIDAWFGSRKTSAAIRTALSHVQNLITGVTKGYRYKMRFVYAHFPINASIANADKSIEIRNFLGEKKVRRVEMLDGVTVLRSDKV-KDELILDGNDIELVSRSAALINQKCHVKNKDIRKFLDGIYVSEKG 563 +E + +PEGV+V I+ + V+GP+G+L+R+F H + + E GK+ + ++A+F +R+ A + T +H++N+ITGVTKG+RYK++ VY+HFP+ + DK + I NFLGEK R +++ GVTV KV KD++I++G DIE V ++AA I Q VK+KD R F+DGIY+ EKG Sbjct: 8 AEEVRVPEGVEVSIDGLKVTVKGPKGELTRDFSHARNIVIRLDEDEEGKK-VVVEAYFANRRVKALVGTIAAHIENMITGVTKGFRYKLKIVYSHFPVTVKV-QGDK-VVIENFLGEKAPRIAKIMPGVTV----KVQKDDVIVEGIDIEAVGQTAANIEQATKVKDKDRRVFIDGIYIYEKG 183 The following BLAST results are available for this feature:
BLAST of CF832596 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 63
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Sequences
The
following sequences are available for this feature:
EST sequence >CF832596 ID=CF832596; Name=CF832596; organism=Citrus sinensis; type=EST; length=677bpback to top |