CF832687

Overview
NameCF832687
Unique NameCF832687
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length807
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF832687 vs. ExPASy Swiss-Prot
Match: CFI_PYRCO (Chalcone--flavonone isomerase OS=Pyrus communis GN=CHI PE=2 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.141e-12
Identity = 51/174 (29.31%), Postives = 84/174 (48.28%), Query Frame = -2
Query:  207 VLLLATGLTDIEIHFLQIKFTAIGVYLDPEILSHLQ-QWKGKQGSSLAQDDDFFDALVSAPVEKFLRIVVIKEIKGSQYGVQLESAVRDRLAGADKYXXXXESALEKIVEFFQSKYFKKDSVIAYHFPAPSPTAEIVFTSEGK--EDSKIKVENANVVEMIKKWYLGGARGVSP 719
            + L   G+  +EI    +KFTAIGVYL+   +  L  +WKGK    L++  +FF  +V+ P EKF+++  I  + G QY  ++             Y      A+EK +E F+ + F   + I +   +P  +  I F+ +    E +   +EN  + E + +  L G  GVSP
Sbjct:   30 LFLGGAGVRGLEIQGNFVKFTAIGVYLEDNAVPLLAVKWKGKTAEELSESVEFFRDIVTGPFEKFIQVTTILPLTGQQYSEKVSENCVAFWKSVGIYTDAEGKAIEKFIEVFKDQNFPPGASILF-TQSPKGSLTICFSKDASVPEAANAVIENKLLSEAVLESIL-GKHGVSP 201          
BLAST of CF832687 vs. ExPASy Swiss-Prot
Match: CFI_HORVU (Chalcone--flavonone isomerase OS=Hordeum vulgare GN=CHI PE=1 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.141e-12
Identity = 55/172 (31.98%), Postives = 80/172 (46.51%), Query Frame = -2
Query:  207 LLATGLTDIEIHFLQIKFTAIGVYL--DPEILSHLQQWKGKQGSSLAQDDDFFDALVSAPVEKFLRIVVIKEIKGSQYGVQLESAVRDRLAGADKYXXXXESALEKIVEFFQSKYFKKD-SVIAYHFPAPSPTAEIVFTSEGKEDSKIKVENANVVEMIKKWYLGGARGVSP 713
            L   G+  +EI    IKFTAIGVYL  D  + +   +W GK  + LA D  FF  +V+   EKF R+ +I  + G+QY  ++          A  Y     +A++K  E F    F    S++  H PA   T      S   E   + +ENA + E + +  + G  GVSP
Sbjct:   28 LAGAGVRGMEIGGHFIKFTAIGVYLQADAAVSALAAKWAGKPAADLASDAAFFRDVVTGEFEKFTRVTMILPLTGAQYSDKVTENCVAYWKAAGVYTDAEAAAVDKFKEAFGPHSFAPGASILFTHSPAGVLTVAFSKDSSVPESGGVAIENARLCEAVLESII-GEHGVSP 198          
BLAST of CF832687 vs. ExPASy Swiss-Prot
Match: CFI2A_SOYBN (Chalcone--flavonone isomerase 2-A OS=Glycine max GN=CHI2-A PE=2 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.141e-12
Identity = 50/174 (28.74%), Postives = 80/174 (45.98%), Query Frame = -2
Query:  207 LLATGLTDIEIHFLQIKFTAIGVYLDPEILSHLQ-QWKGKQGSSLAQDDDFFDALVSAPVEKFLRIVVIKEIKGSQYGVQLESAVRDRLAGADKYXXXXESALEKIVEFFQSKYFKKDSVIAYHFPAPSPTAEIVFTSEGKED----SKIKVENANVVEMIKKWYLGGARGVSP 713
            L   G+  ++IH   +KFTAI +YL  + LS L  +WK K    L + D FF  +V+ P EKF+++ +IK + G QY  ++             Y      A++K +  F+   F   S I +     SP   +  +  G E     +   +EN  + E + +  + G  GVSP
Sbjct:   31 LAGAGVRGLQIHHAFVKFTAICIYLQYDALSFLSVKWKTKSTHQLTESDQFFSDIVTGPFEKFMQVTMIKPLTGQQYSEKVAENCVAIWRSLGIYTDSEAEAIDKFLSVFKDLTFPPGSSILF---TVSPNGSLTISFSGDETIPEVTSAVIENKLLSEAVLESMI-GKNGVSP 200          
BLAST of CF832687 vs. ExPASy Swiss-Prot
Match: CFI_ELAUM (Chalcone--flavonone isomerase OS=Elaeagnus umbellata GN=CHI PE=2 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.542e-12
Identity = 52/174 (29.89%), Postives = 82/174 (47.13%), Query Frame = -2
Query:  207 VLLLATGLTDIEIHFLQIKFTAIGVYLDPEILSHLQ-QWKGKQGSSLAQDDDFFDALVSAPVEKFLRIVVIKEIKGSQYGVQLESAVRDRLAGADKYXXXXESALEKIVEFFQSKYFKKDSVIAYHFPAPSPTAEIVFTSEGK--EDSKIKVENANVVEMIKKWYLGGARGVSP 719
            + L   G+  IEI    IKFTAIGVYL+   +  L  +WKGK    L +  +FF  +V+ P+EKF R+  I  + G QY  ++             Y      A+EK +E F+ + F   +   +   +P  +  + F+ +G   E     +EN  + E + +  + G  GVSP
Sbjct:   31 LFLGGAGVRGIEIQGKFIKFTAIGVYLEDNAVPSLAVKWKGKSAQELTESVEFFRDIVTGPMEKFTRVTTILPLTGQQYSEKVSENCVAAWKSLGIYSDAEAKAIEKFIEIFKDQTFPPAASNLF-TQSPLGSLTMSFSKDGSIPEVGNAVLENKLLSEAVLESII-GKHGVSP 202          
BLAST of CF832687 vs. ExPASy Swiss-Prot
Match: CFI_SAUME (Chalcone--flavonone isomerase OS=Saussurea medusa GN=CHI PE=2 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 4.336e-12
Identity = 48/174 (27.59%), Postives = 85/174 (48.85%), Query Frame = -2
Query:  207 VLLLATGLTDIEIHFLQIKFTAIGVYLDPEILSHLQ-QWKGKQGSSLAQDDDFFDALVSAPVEKFLRIVVIKEIKGSQYGVQLESAVRDRLAGADKYXXXXESALEKIVEFFQSKYFKKDSVIAYHFPAPSPTAEIVFTSEGK--EDSKIKVENANVVEMIKKWYLGGARGVSP 719
            + L   G+  +EI    +KFT IGVYL+ + +  L  +WKGK  + L     F+  +V+ P EKF ++ +I  + G QY  ++             Y     + +EK +E F+ + F   S I +   +P+ +  I F+ +G   E + + +EN  + + + +  + G  GVSP
Sbjct:   30 LFLGGAGVRGMEIQGNFVKFTGIGVYLEDKAIPSLAVKWKGKTAAELTDSVQFYRDIVTGPFEKFSQVTMILPLTGKQYSEKVSEMCIGVWKAQGTYTDADTATIEKFLEVFKDENFLPGSSILF-TTSPTGSLTISFSKDGNIPEAATVVLENRKLAQTVIESVI-GEHGVSP 201          
BLAST of CF832687 vs. ExPASy Swiss-Prot
Match: CFI_MAIZE (Chalcone--flavonone isomerase OS=Zea mays GN=CHI PE=2 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 4.336e-12
Identity = 54/167 (32.34%), Postives = 78/167 (46.71%), Query Frame = -2
Query:  207 GLTDIEIHFLQIKFTAIGVYLDPEILSHL-QQWKGKQGSSLAQDDDFFDALVSAPVEKFLRIVVIKEIKGSQYGVQLESAVRDRLAGADKYXXXXESALEKIVEFFQSKYFKKD-SVIAYHFPAPSPTAEIVFTSEGKEDSKIKVENANVVEMIKKWYLGGARGVSP 701
            G+  +EI    IKFTAIGVYL+   +  L ++W GK    LA D  FF  +V+   EKF R+ +I  + G QY  ++          A  Y      A+EK  E F+ + F    S++  H PA   T      S       + +EN  + E + +  + G RGVSP
Sbjct:   32 GVRGVEIGGNFIKFTAIGVYLEDAAVPALAKKWGGKTADELASDAAFFRDVVTGDFEKFTRVTMILPLTGEQYAEKVTENCVAFWKAAGLYTDAEGVAVEKFREVFKPETFAPGRSILFTHSPAGVLTVAFSKDSSVPAAGGVAIENKRLCEAVLESII-GERGVSP 197          
BLAST of CF832687 vs. ExPASy Swiss-Prot
Match: CFI_IPOBA (Chalcone--flavonone isomerase OS=Ipomoea batatas GN=CHI PE=2 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 5.663e-12
Identity = 51/174 (29.31%), Postives = 81/174 (46.55%), Query Frame = -2
Query:  207 VLLLATGLTDIEIHFLQIKFTAIGVYLDPEILSHLQ-QWKGKQGSSLAQDDDFFDALVSAPVEKFLRIVVIKEIKGSQYGVQLESAVRDRLAGADKYXXXXESALEKIVEFFQSKYFKKDSVIAYHFPAPSPTAEIVFTSEGK--EDSKIKVENANVVEMIKKWYLGGARGVSP 719
            ++L   G   + I    +KFTAIGVYL+ + +  L  +W GK    L     FF  +V+ P EK  RI +I  + G QY  ++          A  Y      A+EK  + F  + F   + I +   +P  +  I F+ EG   E +   +EN  + E + +  + G++GVSP
Sbjct:   30 LILGGAGARGLNIDGKFVKFTAIGVYLEADAVPSLAVKWNGKSAEELTDSVQFFRDIVTGPFEKLTRITMILPLSGKQYSEKVSENCVAFWKAAGMYGDAESKAIEKFNDVFSDQMFPPGASI-FFTQSPHGSLTISFSKEGSMPEIASAVIENKPLSEAVLESII-GSKGVSP 201          
BLAST of CF832687 vs. ExPASy Swiss-Prot
Match: CFI_GOSHI (Chalcone--flavonone isomerase OS=Gossypium hirsutum GN=CHI PE=2 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.261e-11
Identity = 52/173 (30.06%), Postives = 79/173 (45.66%), Query Frame = -2
Query:  207 VLLLATGLTDIEIHFLQIKFTAIGVYLDPEILSHLQ-QWKGKQGSSLAQDDDFFDALVSAPVEKFLRIVVIKEIKGSQYGVQLESAVRDRLAGADKYXXXXESALEKIVEFFQSKYFKKDSVIAYHFPAP-SPTAEIVFTSEGKEDSKIKVENANVVEMIKKWYLGGARGVSP 719
            + L   G   +EI    IKFTAIGVYL+   ++ L  +WKGK    L +  +FF  +V+   EKF+R+ +I  + G QY  ++             Y      A+EK +E F+ + F   S I +      S T      S   E  K+ +EN  +   + +  + G  GVSP
Sbjct:   30 LFLGGAGERGLEIQGKFIKFTAIGVYLEDSAVNCLGVKWKGKSAVELTESVEFFRDVVTGDFEKFIRVTMILPLTGQQYSEKVSENCVAIWKSLGIYTDAEAKAIEKFIEVFKDENFPPGSSILFTISGQGSLTIGFSKDSSVPEGGKVVIENKLLANSVLESVI-GKNGVSP 201          
BLAST of CF832687 vs. ExPASy Swiss-Prot
Match: CFI2_FRAAN (Chalcone--flavonone isomerase 2 OS=Fragaria ananassa GN=CHI2 PE=2 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.261e-11
Identity = 50/174 (28.74%), Postives = 85/174 (48.85%), Query Frame = -2
Query:  207 VLLLATGLTDIEIHFLQIKFTAIGVYLDPEILSHLQ-QWKGKQGSSLAQDDDFFDALVSAPVEKFLRIVVIKEIKGSQYGVQLESAVRDRLAGADKYXXXXESALEKIVEFFQSKYFKKDSVIAYHFPAPSPTAEIVFTSEGK--EDSKIKVENANVVEMIKKWYLGGARGVSP 719
            + L   G+  +EI    +KFTAIGVYL+ + +  L  +WKGK    L +  +FF  +V+ P EKF ++ +I  + G QY  ++             Y      A+EK +E F+ + F   + I +   +P+ +  I  + +G   E     +EN  + E + +  + G +GVSP
Sbjct:   28 LFLGGAGVRGMEIQGNFVKFTAIGVYLEDKAVPALSVKWKGKTAEELTESVEFFREIVTGPFEKFTQVTMILPLTGQQYSEKVSENCVAIWKKFGIYTDAEAKAIEKFIEVFKDQTFPPGASILF-TQSPNGSLMIGISKDGSIPEVGNAVIENKLLSESVLESII-GKQGVSP 199          
BLAST of CF832687 vs. ExPASy Swiss-Prot
Match: CFI1_FRAAN (Chalcone--flavonone isomerase 1 OS=Fragaria ananassa GN=CHI1 PE=2 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.261e-11
Identity = 50/168 (29.76%), Postives = 82/168 (48.81%), Query Frame = -2
Query:  207 GLTDIEIHFLQIKFTAIGVYLDPEILSHLQ-QWKGKQGSSLAQDDDFFDALVSAPVEKFLRIVVIKEIKGSQYGVQLESAVRDRLAGADKYXXXXESALEKIVEFFQSKYFKKDSVIAYHFPAPSPTAEIVFTSEG--KEDSKIKVENANVVEMIKKWYLGGARGVSP 701
            G+  +EI    +KFTAIGVYL+ + +  L  +WKGK    L +  +FF  +V+ P EKF ++ +I  + G QY  ++             Y      A+EK +E F+ + F   + I +   +P  +  I F+ +G   E     +EN  + E + +  + G  GVSP
Sbjct:   34 GVRGMEIQGNFVKFTAIGVYLEDKAVPALAVKWKGKTAEELTESVEFFREIVTGPFEKFTQVTMILPLTGQQYSEKVSENCVAIWKKFGIYTDAEAKAIEKFIEVFKDQTFPPGASILF-TQSPDGSLTIGFSKDGCIPEVGNAVIENKLLSESVLESII-GKPGVSP 199          
The following BLAST results are available for this feature:
BLAST of CF832687 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 27
Match NameE-valueIdentityDescription
CFI_PYRCO1.141e-1229.31Chalcone--flavonone isomerase OS=Pyrus communis GN... [more]
CFI_HORVU1.141e-1231.98Chalcone--flavonone isomerase OS=Hordeum vulgare G... [more]
CFI2A_SOYBN1.141e-1228.74Chalcone--flavonone isomerase 2-A OS=Glycine max G... [more]
CFI_ELAUM2.542e-1229.89Chalcone--flavonone isomerase OS=Elaeagnus umbella... [more]
CFI_SAUME4.336e-1227.59Chalcone--flavonone isomerase OS=Saussurea medusa ... [more]
CFI_MAIZE4.336e-1232.34Chalcone--flavonone isomerase OS=Zea mays GN=CHI P... [more]
CFI_IPOBA5.663e-1229.31Chalcone--flavonone isomerase OS=Ipomoea batatas G... [more]
CFI_GOSHI1.261e-1130.06Chalcone--flavonone isomerase OS=Gossypium hirsutu... [more]
CFI2_FRAAN1.261e-1128.74Chalcone--flavonone isomerase 2 OS=Fragaria ananas... [more]
CFI1_FRAAN1.261e-1129.76Chalcone--flavonone isomerase 1 OS=Fragaria ananas... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_02E07_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa02E07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832687 ID=CF832687; Name=CF832687; organism=Citrus sinensis; type=EST; length=807bp
ACTCGAGAAATTTTCTTGAAGGACCTTAGCAAAGCAAATTTCCATTAAAA
TAGAAGCATGGTTGCGGGGTAAACACGTCATTCAAATTGCACAAATTTAC
AGCAATTCCAAAACCCAAGTGAAGAAGCACTTTTATTAGAAAGCGCAGAG
CTGCTTCATTTTGATAACTCAGCTGAGAGAGTATTGGCTAGAGATGATGT
TGTTGTAGGAGACACTCCCCTTGCTCCACCCAAGTACCATTTCTTGATCA
TCTCAACCACATTCGCATTCTCCACTTTGATTTTTGAGTCCTCCTTTCCT
TCACTTGTAAACACTATCTCAGCAGTAGGGGATGGTGCCGGAAAATGATA
AGCAATCACAGAGTCCTTCTTAAAATACTTGGATTGGAAGAATTCAACGA
TTTTCTCAAGGGCAGATTCTTCCTCTTCTTCATATTTGTCAGCTCCGGCC
AATCTGTCCCTCACCGCACTTTCTAACTGAACCCCATATTGTGACCCCTT
GATCTCCTTGATCACAACAATTCTCAAAAATTTCTCTACTGGAGCAGAGA
CAAGAGCATCAAAGAAGTCATCATCTTGTGCAAGGGAACTTCCCTGTTTG
CCCTTCCACTGTTGCAAGTGACTCAAAATTTCAGGATCCAAGTATACTCC
AATTGCCGTGAACTTGATTTGGAGAAAGTGTATCTCAATGTCTGTTAAAC
CTGTTGCAAGCAGCAGCACCCCCAACTCAACAAGTTTCATAATGGCCATT
AAACACCTCTAAAATGACAGAATTGTTCATAATGAAATGAAATGGATTGA
TTATTGC
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