CF832834

Overview
NameCF832834
Unique NameCF832834
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length598
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF832834 vs. ExPASy Swiss-Prot
Match: 14335_ORYSJ (14-3-3-like protein GF14-E OS=Oryza sativa subsp. japonica GN=GF14E PE=2 SV=1)

HSP 1 Score: 190.274 bits (482), Expect = 6.389e-48
Identity = 97/112 (86.61%), Postives = 105/112 (93.75%), Query Frame = 2
Query:    2 AESTLLAYKSAQDIALAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAISELDTLGEESYKDSTLIMQLLRDNLTLWTSDITDDAGDEIKEAASKRESGETQ 337
            AE+T++AYK+AQDIALAEL PTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAISELDTL EESYKDSTLIMQLLRDNLTLWTSDI++DA +EIKE A K ESG+ Q
Sbjct:  152 AENTMVAYKAAQDIALAELPPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAISELDTLSEESYKDSTLIMQLLRDNLTLWTSDISEDAAEEIKE-APKGESGDGQ 262          
BLAST of CF832834 vs. ExPASy Swiss-Prot
Match: 14335_ARATH (14-3-3-like protein GF14 upsilon OS=Arabidopsis thaliana GN=GRF5 PE=1 SV=2)

HSP 1 Score: 189.889 bits (481), Expect = 8.344e-48
Identity = 95/112 (84.82%), Postives = 104/112 (92.86%), Query Frame = 2
Query:    2 AESTLLAYKSAQDIALAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAISELDTLGEESYKDSTLIMQLLRDNLTLWTSDITDDAGDEIKEAASKRESGETQ 337
            AESTL+AYKSAQDIALA+LAPTHPIRLGLALNFSVFYYEILNS DRAC+LAKQAFDEAISELDTLGEESYKDSTLIMQLLRDNLTLWTSD+ D+AGD+IKEA  + +  + Q
Sbjct:  150 AESTLVAYKSAQDIALADLAPTHPIRLGLALNFSVFYYEILNSSDRACSLAKQAFDEAISELDTLGEESYKDSTLIMQLLRDNLTLWTSDLNDEAGDDIKEAPKEVQKVDEQ 261          
BLAST of CF832834 vs. ExPASy Swiss-Prot
Match: 14337_ARATH (14-3-3-like protein GF14 nu OS=Arabidopsis thaliana GN=GRF7 PE=1 SV=1)

HSP 1 Score: 189.119 bits (479), Expect = 1.423e-47
Identity = 100/111 (90.09%), Postives = 104/111 (93.69%), Query Frame = 2
Query:    2 AESTLLAYKSAQDIALAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAISELDTLGEESYKDSTLIMQLLRDNLTLWTSDITDDA-GDEIKEAASKRESGE 331
            AESTL+AYKSAQDIALA+LAPTHPIRLGLALNFSVFYYEILNSPDRAC+LAKQAFDEAISELDTLGEESYKDSTLIMQLLRDNLTLW SDI D+A GDEIKE ASK E  E
Sbjct:  148 AESTLVAYKSAQDIALADLAPTHPIRLGLALNFSVFYYEILNSPDRACSLAKQAFDEAISELDTLGEESYKDSTLIMQLLRDNLTLWNSDINDEAGGDEIKE-ASKHEPEE 257          
BLAST of CF832834 vs. ExPASy Swiss-Prot
Match: 1433_PEA (14-3-3-like protein OS=Pisum sativum PE=2 SV=1)

HSP 1 Score: 188.734 bits (478), Expect = 1.859e-47
Identity = 95/107 (88.79%), Postives = 98/107 (91.59%), Query Frame = 2
Query:    2 AESTLLAYKSAQDIALAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAISELDTLGEESYKDSTLIMQLLRDNLTLWTSDITDDAGDEIKEAASKRE 322
            AESTL  YKSAQDIA AEL PTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAI+ELDTLGEESYKDSTLIMQLLRDNLTLWTSD+ DD  DEIKEAA K +
Sbjct:  151 AESTLTGYKSAQDIANAELPPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQDDGADEIKEAAPKAD 257          
BLAST of CF832834 vs. ExPASy Swiss-Prot
Match: 14336_SOLLC (14-3-3 protein 6 OS=Solanum lycopersicum GN=TFT6 PE=2 SV=2)

HSP 1 Score: 188.734 bits (478), Expect = 1.859e-47
Identity = 95/110 (86.36%), Postives = 100/110 (90.91%), Query Frame = 2
Query:    2 AESTLLAYKSAQDIALAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAISELDTLGEESYKDSTLIMQLLRDNLTLWTSDITDDAGDEIKEAASKRESGE 331
            AE+TL AYK+AQDIA AELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAI+ELDTLGEESYKDSTLIMQLLRDNLTLWTSD+ DD  DEIKEA  K +  E
Sbjct:  149 AENTLSAYKAAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQDDGTDEIKEATPKPDDNE 258          
BLAST of CF832834 vs. ExPASy Swiss-Prot
Match: 14332_ORYSJ (14-3-3-like protein GF14-B OS=Oryza sativa subsp. japonica GN=GF14B PE=1 SV=2)

HSP 1 Score: 187.963 bits (476), Expect = 3.171e-47
Identity = 95/112 (84.82%), Postives = 104/112 (92.86%), Query Frame = 2
Query:    2 AESTLLAYKSAQDIALAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAISELDTLGEESYKDSTLIMQLLRDNLTLWTSDITDDAGDEIKEAASKRESGETQ 337
            AE+T++AYK+AQDIALAEL PTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAISELDTL EESYKDSTLIMQLLRDNLTLWTSDI++D  +EI+E A KR+S E Q
Sbjct:  152 AENTMVAYKAAQDIALAELPPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAISELDTLSEESYKDSTLIMQLLRDNLTLWTSDISEDTAEEIRE-APKRDSSEGQ 262          
BLAST of CF832834 vs. ExPASy Swiss-Prot
Match: 1433A_HORVU (14-3-3-like protein A OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 187.578 bits (475), Expect = 4.141e-47
Identity = 94/107 (87.85%), Postives = 101/107 (94.39%), Query Frame = 2
Query:    2 AESTLLAYKSAQDIALAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAISELDTLGEESYKDSTLIMQLLRDNLTLWTSDITDDAGDEIKEAASKRE 322
            AE+TL+AYKSAQDIALA+L  THPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAI+ELD+LGEESYKDSTLIMQLLRDNLTLWTSD  ++ GDEIKEAASK E
Sbjct:  151 AENTLVAYKSAQDIALADLPTTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAIAELDSLGEESYKDSTLIMQLLRDNLTLWTSDNAEEGGDEIKEAASKPE 257          
BLAST of CF832834 vs. ExPASy Swiss-Prot
Match: 14331_MAIZE (14-3-3-like protein GF14-6 OS=Zea mays GN=GRF1 PE=1 SV=1)

HSP 1 Score: 187.578 bits (475), Expect = 4.141e-47
Identity = 95/112 (84.82%), Postives = 105/112 (93.75%), Query Frame = 2
Query:    2 AESTLLAYKSAQDIALAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAISELDTLGEESYKDSTLIMQLLRDNLTLWTSDITDDAGDEIKEAASKRESGETQ 337
            AE+T++AYK+AQDIALAELAPTHPIRLGLALNFSVFYYEILNSPDRAC+LAKQAFDEAISELDTL EESYKDSTLIMQLLRDNLTLWTSDI++D  +EI+E A KR+S E Q
Sbjct:  151 AENTMVAYKAAQDIALAELAPTHPIRLGLALNFSVFYYEILNSPDRACSLAKQAFDEAISELDTLSEESYKDSTLIMQLLRDNLTLWTSDISEDPAEEIRE-APKRDSSEGQ 261          
BLAST of CF832834 vs. ExPASy Swiss-Prot
Match: 1433B_TOBAC (14-3-3-like protein B OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 187.193 bits (474), Expect = 5.409e-47
Identity = 94/107 (87.85%), Postives = 98/107 (91.59%), Query Frame = 2
Query:    2 AESTLLAYKSAQDIALAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAISELDTLGEESYKDSTLIMQLLRDNLTLWTSDITDDAGDEIKEAASKRE 322
            AESTL AYK+AQDIA AELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAI+ELDTLGEESYKDSTLIMQLLRDNLTLWTSD+ DD  DEIKE  +  E
Sbjct:  147 AESTLSAYKAAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQDDGADEIKETKTDNE 253          
BLAST of CF832834 vs. ExPASy Swiss-Prot
Match: 14333_SOLLC (14-3-3 protein 3 OS=Solanum lycopersicum GN=TFT3 PE=2 SV=1)

HSP 1 Score: 186.808 bits (473), Expect = 7.064e-47
Identity = 94/107 (87.85%), Postives = 97/107 (90.65%), Query Frame = 2
Query:    2 AESTLLAYKSAQDIALAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAISELDTLGEESYKDSTLIMQLLRDNLTLWTSDITDDAGDEIKEAASKRE 322
            AESTL AYK+AQDIA AELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAI+ELDTLGEESYKDSTLIMQLLRDNLTLWTSD+ DD  DEIKE     E
Sbjct:  152 AESTLTAYKAAQDIASAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQDDGADEIKEDPKPEE 258          
The following BLAST results are available for this feature:
BLAST of CF832834 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 143
Match NameE-valueIdentityDescription
14335_ORYSJ6.389e-4886.6114-3-3-like protein GF14-E OS=Oryza sativa subsp. ... [more]
14335_ARATH8.344e-4884.8214-3-3-like protein GF14 upsilon OS=Arabidopsis th... [more]
14337_ARATH1.423e-4790.0914-3-3-like protein GF14 nu OS=Arabidopsis thalian... [more]
1433_PEA1.859e-4788.7914-3-3-like protein OS=Pisum sativum PE=2 SV=1[more]
14336_SOLLC1.859e-4786.3614-3-3 protein 6 OS=Solanum lycopersicum GN=TFT6 P... [more]
14332_ORYSJ3.171e-4784.8214-3-3-like protein GF14-B OS=Oryza sativa subsp. ... [more]
1433A_HORVU4.141e-4787.8514-3-3-like protein A OS=Hordeum vulgare PE=2 SV=1[more]
14331_MAIZE4.141e-4784.8214-3-3-like protein GF14-6 OS=Zea mays GN=GRF1 PE=... [more]
1433B_TOBAC5.409e-4787.8514-3-3-like protein B OS=Nicotiana tabacum PE=2 SV... [more]
14333_SOLLC7.064e-4787.8514-3-3 protein 3 OS=Solanum lycopersicum GN=TFT3 P... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_02I09_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa02I09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832834 ID=CF832834; Name=CF832834; organism=Citrus sinensis; type=EST; length=598bp
TGCGGAGAGCACTTTGTTGGCCTACAAGTCAGCTCAGGATATTGCTTTAG
CTGAATTGGCCCCTACTCACCCCATAAGGCTGGGACTTGCACTCAACTTC
TCTGTGTTCTACTATGAAATCCTTAACTCACCAGATCGTGCATGCAATCT
TGCGAAGCAGGCTTTTGATGAGGCCATTTCTGAGCTTGATACCTTGGGTG
AAGAATCATACAAGGACAGTACATTGATTATGCAGCTTCTCCGAGATAAT
CTGACACTTTGGACTTCTGATATCACTGATGATGCTGGAGATGAGATTAA
GGAAGCAGCATCAAAACGTGAATCAGGGGAGACGCAGCAGTGATGAATAA
TGAGTTCAGTTCATAGGATATGTATCTGTATTTTTATCTTGTGGCTTTTA
TTTTACATGGATGCCATGTGGGTTGTTTTAGCAGGATATTCTCATGAACT
GATAATCTTGAGTGTTGGCTGCACTTAGGGTTCATGTGTTCCAACAGATT
GTAAACTAGATTTAATTATTGATGAGAAGTATTTGGTTTGGGTTTCATAT
GTAGTGTTTTCAGTGCTATGCTAAACTTTAGAATTGAAATTAAAAAAA
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