CF832834

Overview
NameCF832834
Unique NameCF832834
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length598
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF832834 vs. ExPASy Swiss-Prot
Match: 1433E_MOUSE (14-3-3 protein epsilon OS=Mus musculus GN=Ywhae PE=1 SV=1)

HSP 1 Score: 165.236 bits (417), Expect = 2.201e-40
Identity = 81/102 (79.41%), Postives = 91/102 (89.22%), Query Frame = 2
Query:    2 AESTLLAYKSAQDIALAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAISELDTLGEESYKDSTLIMQLLRDNLTLWTSDITDDAGDEIKEA 307
            AE++L+AYK+A DIA+ EL PTHPIRLGLALNFSVFYYEILNSPDRAC LAK AFD+AI+ELDTL EESYKDSTLIMQLLRDNLTLWTSD+  D  ++ KEA
Sbjct:  145 AENSLVAYKAASDIAMTELPPTHPIRLGLALNFSVFYYEILNSPDRACRLAKAAFDDAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSDMQGDGEEQNKEA 246          
BLAST of CF832834 vs. ExPASy Swiss-Prot
Match: 1433E_HUMAN (14-3-3 protein epsilon OS=Homo sapiens GN=YWHAE PE=1 SV=1)

HSP 1 Score: 165.236 bits (417), Expect = 2.201e-40
Identity = 81/102 (79.41%), Postives = 91/102 (89.22%), Query Frame = 2
Query:    2 AESTLLAYKSAQDIALAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAISELDTLGEESYKDSTLIMQLLRDNLTLWTSDITDDAGDEIKEA 307
            AE++L+AYK+A DIA+ EL PTHPIRLGLALNFSVFYYEILNSPDRAC LAK AFD+AI+ELDTL EESYKDSTLIMQLLRDNLTLWTSD+  D  ++ KEA
Sbjct:  145 AENSLVAYKAASDIAMTELPPTHPIRLGLALNFSVFYYEILNSPDRACRLAKAAFDDAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSDMQGDGEEQNKEA 246          
BLAST of CF832834 vs. ExPASy Swiss-Prot
Match: 1433E_CHICK (14-3-3 protein epsilon OS=Gallus gallus GN=YWHAE PE=1 SV=1)

HSP 1 Score: 165.236 bits (417), Expect = 2.201e-40
Identity = 81/102 (79.41%), Postives = 91/102 (89.22%), Query Frame = 2
Query:    2 AESTLLAYKSAQDIALAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAISELDTLGEESYKDSTLIMQLLRDNLTLWTSDITDDAGDEIKEA 307
            AE++L+AYK+A DIA+ EL PTHPIRLGLALNFSVFYYEILNSPDRAC LAK AFD+AI+ELDTL EESYKDSTLIMQLLRDNLTLWTSD+  D  ++ KEA
Sbjct:  145 AENSLVAYKAASDIAMTELPPTHPIRLGLALNFSVFYYEILNSPDRACRLAKAAFDDAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSDMQGDGEEQNKEA 246          
BLAST of CF832834 vs. ExPASy Swiss-Prot
Match: 1433E_BOVIN (14-3-3 protein epsilon OS=Bos taurus GN=YWHAE PE=2 SV=1)

HSP 1 Score: 165.236 bits (417), Expect = 2.201e-40
Identity = 81/102 (79.41%), Postives = 91/102 (89.22%), Query Frame = 2
Query:    2 AESTLLAYKSAQDIALAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAISELDTLGEESYKDSTLIMQLLRDNLTLWTSDITDDAGDEIKEA 307
            AE++L+AYK+A DIA+ EL PTHPIRLGLALNFSVFYYEILNSPDRAC LAK AFD+AI+ELDTL EESYKDSTLIMQLLRDNLTLWTSD+  D  ++ KEA
Sbjct:  145 AENSLVAYKAASDIAMTELPPTHPIRLGLALNFSVFYYEILNSPDRACRLAKAAFDDAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSDMQGDGEEQNKEA 246          
BLAST of CF832834 vs. ExPASy Swiss-Prot
Match: 14336_ARATH (14-3-3-like protein GF14 lambda OS=Arabidopsis thaliana GN=GRF6 PE=1 SV=1)

HSP 1 Score: 164.466 bits (415), Expect = 3.754e-40
Identity = 79/93 (84.95%), Postives = 89/93 (95.70%), Query Frame = 2
Query:    2 AESTLLAYKSAQDIALAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAISELDTLGEESYKDSTLIMQLLRDNLTLWTSDITD 280
            AE T+LAYK+AQDIA A++APTHPIRLGLALNFSVFYYEILNS D+ACN+AKQAF+EAI+ELDTLGEESYKDSTLIMQLLRDNLTLWTSD+ +
Sbjct:  151 AEDTMLAYKAAQDIAAADMAPTHPIRLGLALNFSVFYYEILNSSDKACNMAKQAFEEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQE 243          
BLAST of CF832834 vs. ExPASy Swiss-Prot
Match: 1433D_TOBAC (14-3-3-like protein D OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 162.54 bits (410), Expect = 1.427e-39
Identity = 78/93 (83.87%), Postives = 90/93 (96.77%), Query Frame = 2
Query:    2 AESTLLAYKSAQDIALAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAISELDTLGEESYKDSTLIMQLLRDNLTLWTSDITD 280
            AE T+LAYK+AQDIALAELAPTHPIRLGLALN+SVFYYEILN+ ++AC++AKQAF+EAI+ELDTLGEESYKDSTLIMQLLRDNLTLWTSD+ +
Sbjct:  152 AEDTMLAYKAAQDIALAELAPTHPIRLGLALNYSVFYYEILNASEKACSMAKQAFEEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQE 244          
BLAST of CF832834 vs. ExPASy Swiss-Prot
Match: 1433_DICDI (14-3-3-like protein OS=Dictyostelium discoideum GN=fttB PE=1 SV=2)

HSP 1 Score: 161.77 bits (408), Expect = 2.433e-39
Identity = 78/91 (85.71%), Postives = 86/91 (94.51%), Query Frame = 2
Query:    2 AESTLLAYKSAQDIALAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAISELDTLGEESYKDSTLIMQLLRDNLTLWTSDI 274
            AES+L+AYK+A DIA+ EL PTHPIRLGLALNFSVFYYEILNSPDRACNLAK AFD+AI+ELDTL E+SYKDSTLIMQLLRDNLTLWTSD+
Sbjct:  144 AESSLIAYKAASDIAVTELPPTHPIRLGLALNFSVFYYEILNSPDRACNLAKTAFDDAIAELDTLSEDSYKDSTLIMQLLRDNLTLWTSDV 234          
BLAST of CF832834 vs. ExPASy Swiss-Prot
Match: 14331_SOLLC (14-3-3 protein 1 OS=Solanum lycopersicum GN=TFT1 PE=3 SV=2)

HSP 1 Score: 161.77 bits (408), Expect = 2.433e-39
Identity = 77/93 (82.80%), Postives = 90/93 (96.77%), Query Frame = 2
Query:    2 AESTLLAYKSAQDIALAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAISELDTLGEESYKDSTLIMQLLRDNLTLWTSDITD 280
            AE T+LAYK+AQDIA+AELAPTHPIRLGLALNFSVFYYEILN+ ++AC++AKQAF+EAI+ELDT+GEESYKDSTLIMQLLRDNLTLWTSD+ +
Sbjct:  152 AEDTMLAYKAAQDIAVAELAPTHPIRLGLALNFSVFYYEILNASEKACSMAKQAFEEAIAELDTMGEESYKDSTLIMQLLRDNLTLWTSDMQE 244          
BLAST of CF832834 vs. ExPASy Swiss-Prot
Match: 14338_ARATH (14-3-3-like protein GF14 kappa OS=Arabidopsis thaliana GN=GRF8 PE=2 SV=2)

HSP 1 Score: 161.384 bits (407), Expect = 3.178e-39
Identity = 76/93 (81.72%), Postives = 90/93 (96.77%), Query Frame = 2
Query:    2 AESTLLAYKSAQDIALAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAISELDTLGEESYKDSTLIMQLLRDNLTLWTSDITD 280
            AE T++AYK+AQD+A+A+LAPTHPIRLGLALNFSVFYYEILNS ++AC++AKQAF+EAI+ELDTLGEESYKDSTLIMQLLRDNLTLWTSD+ +
Sbjct:  151 AEDTMIAYKAAQDVAVADLAPTHPIRLGLALNFSVFYYEILNSSEKACSMAKQAFEEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQE 243          
BLAST of CF832834 vs. ExPASy Swiss-Prot
Match: 14339_SOLLC (14-3-3 protein 9 OS=Solanum lycopersicum GN=TFT9 PE=2 SV=2)

HSP 1 Score: 160.999 bits (406), Expect = 4.151e-39
Identity = 81/109 (74.31%), Postives = 93/109 (85.32%), Query Frame = 2
Query:    2 AESTLLAYKSAQDIALAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAISELDTLGEESYKDSTLIMQLLRDNLTLWTSDITDDAGDEIKEAASKRESG 328
            AE +L AY++A   A AELAPTHPIRLGLALNFSVFYYEI+NSP+RAC+LAKQAFDEAISELD+L E+SYKDSTLIMQLLRDNLTLWTSD+ +DA D  K  A+ +  G
Sbjct:  148 AELSLKAYQAATTAAEAELAPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDSLNEDSYKDSTLIMQLLRDNLTLWTSDLPEDAEDAQKGDATNKAGG 256          
The following BLAST results are available for this feature:
BLAST of CF832834 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 143
Match NameE-valueIdentityDescription
1433E_MOUSE2.201e-4079.4114-3-3 protein epsilon OS=Mus musculus GN=Ywhae PE... [more]
1433E_HUMAN2.201e-4079.4114-3-3 protein epsilon OS=Homo sapiens GN=YWHAE PE... [more]
1433E_CHICK2.201e-4079.4114-3-3 protein epsilon OS=Gallus gallus GN=YWHAE P... [more]
1433E_BOVIN2.201e-4079.4114-3-3 protein epsilon OS=Bos taurus GN=YWHAE PE=2... [more]
14336_ARATH3.754e-4084.9514-3-3-like protein GF14 lambda OS=Arabidopsis tha... [more]
1433D_TOBAC1.427e-3983.8714-3-3-like protein D OS=Nicotiana tabacum PE=2 SV... [more]
1433_DICDI2.433e-3985.7114-3-3-like protein OS=Dictyostelium discoideum GN... [more]
14331_SOLLC2.433e-3982.8014-3-3 protein 1 OS=Solanum lycopersicum GN=TFT1 P... [more]
14338_ARATH3.178e-3981.7214-3-3-like protein GF14 kappa OS=Arabidopsis thal... [more]
14339_SOLLC4.151e-3974.3114-3-3 protein 9 OS=Solanum lycopersicum GN=TFT9 P... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_02I09_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa02I09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832834 ID=CF832834; Name=CF832834; organism=Citrus sinensis; type=EST; length=598bp
TGCGGAGAGCACTTTGTTGGCCTACAAGTCAGCTCAGGATATTGCTTTAG
CTGAATTGGCCCCTACTCACCCCATAAGGCTGGGACTTGCACTCAACTTC
TCTGTGTTCTACTATGAAATCCTTAACTCACCAGATCGTGCATGCAATCT
TGCGAAGCAGGCTTTTGATGAGGCCATTTCTGAGCTTGATACCTTGGGTG
AAGAATCATACAAGGACAGTACATTGATTATGCAGCTTCTCCGAGATAAT
CTGACACTTTGGACTTCTGATATCACTGATGATGCTGGAGATGAGATTAA
GGAAGCAGCATCAAAACGTGAATCAGGGGAGACGCAGCAGTGATGAATAA
TGAGTTCAGTTCATAGGATATGTATCTGTATTTTTATCTTGTGGCTTTTA
TTTTACATGGATGCCATGTGGGTTGTTTTAGCAGGATATTCTCATGAACT
GATAATCTTGAGTGTTGGCTGCACTTAGGGTTCATGTGTTCCAACAGATT
GTAAACTAGATTTAATTATTGATGAGAAGTATTTGGTTTGGGTTTCATAT
GTAGTGTTTTCAGTGCTATGCTAAACTTTAGAATTGAAATTAAAAAAA
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