CF832834

Overview
NameCF832834
Unique NameCF832834
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length598
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF832834 vs. ExPASy Swiss-Prot
Match: BMH2_YEAST (Protein BMH2 OS=Saccharomyces cerevisiae GN=BMH2 PE=1 SV=3)

HSP 1 Score: 158.688 bits (400), Expect = 2.060e-38
Identity = 77/111 (69.37%), Postives = 94/111 (84.68%), Query Frame = 2
Query:    8 STLLAYKSAQDIALAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAISELDTLGEESYKDSTLIMQLLRDNLTLWTSDITDDAGDEIKEAASKRESGETQQ 340
            S+L AYK+A +IA  EL PTHPIRLGLALNFSVFYYEI NSPD+AC+LAKQAFD+AI+ELDTL EESYKDSTLIMQLLRDNLTLWTSDI++   ++ ++   +++  + QQ
Sbjct:  149 SSLEAYKTASEIATTELPPTHPIRLGLALNFSVFYYEIQNSPDKACHLAKQAFDDAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSDISESGQEDQQQQQQQQQQQQQQQ 259          
BLAST of CF832834 vs. ExPASy Swiss-Prot
Match: 1433B_VICFA (14-3-3-like protein B OS=Vicia faba PE=2 SV=1)

HSP 1 Score: 158.303 bits (399), Expect = 2.690e-38
Identity = 80/108 (74.07%), Postives = 89/108 (82.41%), Query Frame = 2
Query:    5 ESTLLAYKSAQDIALAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAISELDTLGEESYKDSTLIMQLLRDNLTLWTSDITDDAGDEIKEAASKRESG 328
            + ++ AY+SA   A AEL PTHPIRLGLALNFSVFYYEILNSP+RAC+LAKQAFDEAISELDTL EESYKDSTLIMQLLRDNLTLWTSDI +D  D  K   + +  G
Sbjct:  149 DQSMKAYESATTAAEAELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAISELDTLNEESYKDSTLIMQLLRDNLTLWTSDIPEDGEDSQKANGTAKFGG 256          
BLAST of CF832834 vs. ExPASy Swiss-Prot
Match: 1433C_SOYBN (14-3-3-like protein C OS=Glycine max GN=GF14C PE=2 SV=1)

HSP 1 Score: 157.918 bits (398), Expect = 3.514e-38
Identity = 81/110 (73.64%), Postives = 94/110 (85.45%), Query Frame = 2
Query:    2 AESTLLAYKSAQDIALAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAISELDTLGEESYKDSTLIMQLLRDNLTLWTSDITDDAGDEIKEAASKRESGE 331
            A+ ++ AY+ A   A AELA THPIRLGLALNFSVFYYEILNSP+RAC+LAKQAFDEAISELDTL EESYKDSTLIMQLLRDNLTLWTSDI +D G+E K  +++ + G+
Sbjct:  148 ADHSMKAYQLASTTAEAELASTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAISELDTLSEESYKDSTLIMQLLRDNLTLWTSDIPED-GEEQKVDSARADGGD 256          
BLAST of CF832834 vs. ExPASy Swiss-Prot
Match: 1433B_SOYBN (14-3-3-like protein B (Fragment) OS=Glycine max GN=GF14B PE=2 SV=1)

HSP 1 Score: 157.918 bits (398), Expect = 3.514e-38
Identity = 76/92 (82.61%), Postives = 85/92 (92.39%), Query Frame = 2
Query:    5 ESTLLAYKSAQDIALAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAISELDTLGEESYKDSTLIMQLLRDNLTLWTSDITD 280
            E T+L+YK+AQDIA A+L PTHPIRLGLALNFSVFYYEILN  D+AC +AKQAF+EAI+ELDTLGEESYKDSTLIMQLLRDNLTLWTSD+ D
Sbjct:  151 EDTMLSYKAAQDIASADLPPTHPIRLGLALNFSVFYYEILNQSDKACAMAKQAFEEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDVQD 242          
BLAST of CF832834 vs. ExPASy Swiss-Prot
Match: 14312_ARATH (14-3-3-like protein GF14 iota OS=Arabidopsis thaliana GN=GRF12 PE=2 SV=1)

HSP 1 Score: 157.918 bits (398), Expect = 3.514e-38
Identity = 80/111 (72.07%), Postives = 91/111 (81.98%), Query Frame = 2
Query:    2 AESTLLAYKSAQDIALAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAISELDTLGEESYKDSTLIMQLLRDNLTLWTSDITDDAG-DEIKEAASKRESGE 331
            AE +L  Y++A   A  EL  THPIRLGLALNFSVFYYEI+NSP+RAC+LAKQAFDEAI+ELDTL EESYKDSTLIMQLLRDNLTLWTSD+ +D G D IK   SK+E  +
Sbjct:  151 AEQSLKGYEAATQAASTELPSTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSDLPEDGGEDNIKTEESKQEQAK 261          
BLAST of CF832834 vs. ExPASy Swiss-Prot
Match: 1433E_DROME (14-3-3 protein epsilon OS=Drosophila melanogaster GN=14-3-3epsilon PE=1 SV=2)

HSP 1 Score: 157.532 bits (397), Expect = 4.589e-38
Identity = 77/97 (79.38%), Postives = 87/97 (89.69%), Query Frame = 2
Query:    2 AESTLLAYKSAQDIALAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAISELDTLGEESYKDSTLIMQLLRDNLTLWTSDITDDAGD 292
            AE++L+AYK+A DIA+ +L PTHPIRLGLALNFSVFYYEILNSPDRAC LAK AFD+AI+ELDTL EESYKDSTLIMQLLRDNLTLWTSD+  +  D
Sbjct:  145 AENSLIAYKAASDIAMNDLPPTHPIRLGLALNFSVFYYEILNSPDRACRLAKAAFDDAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSDMQAEEVD 241          
BLAST of CF832834 vs. ExPASy Swiss-Prot
Match: 1433D_SOYBN (14-3-3-like protein D OS=Glycine max GN=GF14D PE=2 SV=1)

HSP 1 Score: 157.532 bits (397), Expect = 4.589e-38
Identity = 80/109 (73.39%), Postives = 90/109 (82.57%), Query Frame = 2
Query:    2 AESTLLAYKSAQDIALAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAISELDTLGEESYKDSTLIMQLLRDNLTLWTSDITDDAGDEIKEAASKRESG 328
            A+ ++ AY+SA   A A+L PTHPIRLGLALNFSVFYYEILNSP+RAC+LAKQAFDEAISELDTL EESYKDSTLIMQLLRDNLTLWTSDI +D  D  K   + +  G
Sbjct:  148 ADQSMKAYESATAAAEADLPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAISELDTLNEESYKDSTLIMQLLRDNLTLWTSDIPEDGEDAQKVNGTAKLGG 256          
BLAST of CF832834 vs. ExPASy Swiss-Prot
Match: 14339_ARATH (14-3-3-like protein GF14 mu OS=Arabidopsis thaliana GN=GRF9 PE=1 SV=2)

HSP 1 Score: 157.147 bits (396), Expect = 5.994e-38
Identity = 77/109 (70.64%), Postives = 91/109 (83.49%), Query Frame = 2
Query:    2 AESTLLAYKSAQDIALAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAISELDTLGEESYKDSTLIMQLLRDNLTLWTSDITDDAGDEIKEAASKRESG 328
            A+ +L AY+ A   A A+L PTHPIRLGLALNFSVFYYEI+N+P+RAC+LAKQAFDEAISELDTL EESYKDSTLIMQLLRDNLTLWTSDI+++ GD+  +     + G
Sbjct:  148 ADQSLKAYEIATTAAEAKLPPTHPIRLGLALNFSVFYYEIMNAPERACHLAKQAFDEAISELDTLNEESYKDSTLIMQLLRDNLTLWTSDISEEGGDDAHKTNGSAKPG 256          
BLAST of CF832834 vs. ExPASy Swiss-Prot
Match: RAD24_SCHPO (DNA damage checkpoint protein rad24 OS=Schizosaccharomyces pombe GN=rad24 PE=1 SV=2)

HSP 1 Score: 156.762 bits (395), Expect = 7.828e-38
Identity = 78/90 (86.67%), Postives = 83/90 (92.22%), Query Frame = 2
Query:    2 AESTLLAYKSAQDIALAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAISELDTLGEESYKDSTLIMQLLRDNLTLWTSD 271
            A+ +L  YK+A +IA AELAPTHPIRLGLALNFSVFYYEILNSPDRAC LAKQAFDEAISELD+L EESYKDSTLIMQLLRDNLTLWTSD
Sbjct:  147 ADQSLEGYKAASEIATAELAPTHPIRLGLALNFSVFYYEILNSPDRACYLAKQAFDEAISELDSLSEESYKDSTLIMQLLRDNLTLWTSD 236          
BLAST of CF832834 vs. ExPASy Swiss-Prot
Match: 14310_SOLLC (14-3-3 protein 10 OS=Solanum lycopersicum GN=TFT10 PE=2 SV=2)

HSP 1 Score: 155.606 bits (392), Expect = 1.744e-37
Identity = 75/93 (80.65%), Postives = 86/93 (92.47%), Query Frame = 2
Query:    2 AESTLLAYKSAQDIALAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAISELDTLGEESYKDSTLIMQLLRDNLTLWTSDITD 280
            AE T+ +YK+AQ+IAL +L PTHPIRLGLALNFSVFY+EILNS D+AC++AKQAF+EAI+ELDTLGEESYKDSTLIMQLLRDNLTLWTSD  D
Sbjct:  155 AEDTMNSYKAAQEIALTDLPPTHPIRLGLALNFSVFYFEILNSSDKACSMAKQAFEEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDAQD 247          
The following BLAST results are available for this feature:
BLAST of CF832834 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 143
Match NameE-valueIdentityDescription
BMH2_YEAST2.060e-3869.37Protein BMH2 OS=Saccharomyces cerevisiae GN=BMH2 P... [more]
1433B_VICFA2.690e-3874.0714-3-3-like protein B OS=Vicia faba PE=2 SV=1[more]
1433C_SOYBN3.514e-3873.6414-3-3-like protein C OS=Glycine max GN=GF14C PE=2... [more]
1433B_SOYBN3.514e-3882.6114-3-3-like protein B (Fragment) OS=Glycine max GN... [more]
14312_ARATH3.514e-3872.0714-3-3-like protein GF14 iota OS=Arabidopsis thali... [more]
1433E_DROME4.589e-3879.3814-3-3 protein epsilon OS=Drosophila melanogaster ... [more]
1433D_SOYBN4.589e-3873.3914-3-3-like protein D OS=Glycine max GN=GF14D PE=2... [more]
14339_ARATH5.994e-3870.6414-3-3-like protein GF14 mu OS=Arabidopsis thalian... [more]
RAD24_SCHPO7.828e-3886.67DNA damage checkpoint protein rad24 OS=Schizosacch... [more]
14310_SOLLC1.744e-3780.6514-3-3 protein 10 OS=Solanum lycopersicum GN=TFT10... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_02I09_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa02I09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832834 ID=CF832834; Name=CF832834; organism=Citrus sinensis; type=EST; length=598bp
TGCGGAGAGCACTTTGTTGGCCTACAAGTCAGCTCAGGATATTGCTTTAG
CTGAATTGGCCCCTACTCACCCCATAAGGCTGGGACTTGCACTCAACTTC
TCTGTGTTCTACTATGAAATCCTTAACTCACCAGATCGTGCATGCAATCT
TGCGAAGCAGGCTTTTGATGAGGCCATTTCTGAGCTTGATACCTTGGGTG
AAGAATCATACAAGGACAGTACATTGATTATGCAGCTTCTCCGAGATAAT
CTGACACTTTGGACTTCTGATATCACTGATGATGCTGGAGATGAGATTAA
GGAAGCAGCATCAAAACGTGAATCAGGGGAGACGCAGCAGTGATGAATAA
TGAGTTCAGTTCATAGGATATGTATCTGTATTTTTATCTTGTGGCTTTTA
TTTTACATGGATGCCATGTGGGTTGTTTTAGCAGGATATTCTCATGAACT
GATAATCTTGAGTGTTGGCTGCACTTAGGGTTCATGTGTTCCAACAGATT
GTAAACTAGATTTAATTATTGATGAGAAGTATTTGGTTTGGGTTTCATAT
GTAGTGTTTTCAGTGCTATGCTAAACTTTAGAATTGAAATTAAAAAAA
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