CF832834

Overview
NameCF832834
Unique NameCF832834
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length598
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig7580 contig Csv1_Contig7580:571..1169. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF832834 vs. ExPASy Swiss-Prot
Match: BMH1_YEAST (Protein BMH1 OS=Saccharomyces cerevisiae GN=BMH1 PE=1 SV=4)

HSP 1 Score: 152.14 bits (383), Expect = 1.928e-36
Identity = 74/105 (70.48%), Postives = 89/105 (84.76%), Query Frame = 2
Query:    8 STLLAYKSAQDIALAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAISELDTLGEESYKDSTLIMQLLRDNLTLWTSDITDDAGDEIKEAASKRE 322
            ++L AYK+A +IA  EL PTHPIRLGLALNFSVFYYEI NSPD+AC+LAKQAFD+AI+ELDTL EESYKDSTLIMQLLRDNLTLWTSD+++    E ++   + +
Sbjct:  149 ASLEAYKTASEIATTELPPTHPIRLGLALNFSVFYYEIQNSPDKACHLAKQAFDDAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSDMSESGQAEDQQQQQQHQ 253          
BLAST of CF832834 vs. ExPASy Swiss-Prot
Match: RAD25_SCHPO (DNA damage checkpoint protein rad25 OS=Schizosaccharomyces pombe GN=rad25 PE=1 SV=1)

HSP 1 Score: 151.369 bits (381), Expect = 3.289e-36
Identity = 79/110 (71.82%), Postives = 91/110 (82.73%), Query Frame = 2
Query:    2 AESTLLAYKSAQDIALAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAISELDTLGEESYKDSTLIMQLLRDNLTLWTSD--ITDDAGDEIKEAASKRES 325
            A+S+L AYK+A DIA+AEL PT P+RLGLALNFSVFYYEIL+SP+ AC+LAKQ FDEAISELD+L EESYKDSTLIMQLLRDNLTLWTSD      A +E   AA+  E+
Sbjct:  146 ADSSLEAYKAASDIAVAELPPTDPMRLGLALNFSVFYYEILDSPESACHLAKQVFDEAISELDSLSEESYKDSTLIMQLLRDNLTLWTSDAEYNQSAKEEAPAAAAASEN 255          
BLAST of CF832834 vs. ExPASy Swiss-Prot
Match: 14337_SOLLC (14-3-3 protein 7 OS=Solanum lycopersicum GN=TFT7 PE=2 SV=2)

HSP 1 Score: 150.984 bits (380), Expect = 4.295e-36
Identity = 75/100 (75.00%), Postives = 89/100 (89.00%), Query Frame = 2
Query:    2 AESTLLAYKSAQDIALAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAISELDTLGEESYKDSTLIMQLLRDNLTLWTSDITDDAGDEIK 301
            +E +L AY++A   A ++LAPTHPIRLGLALNFSVFYYEILNSP+RAC+LAKQAFDEAI+ELD+L EESYKDSTLIMQLLRDNLTLWTSD+ ++ G+  K
Sbjct:  146 SEQSLKAYEAATATASSDLAPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLSEESYKDSTLIMQLLRDNLTLWTSDL-EEGGEHSK 244          
BLAST of CF832834 vs. ExPASy Swiss-Prot
Match: 1433_TOBAC (14-3-3-like protein OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 5.610e-36
Identity = 75/100 (75.00%), Postives = 88/100 (88.00%), Query Frame = 2
Query:    2 AESTLLAYKSAQDIALAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAISELDTLGEESYKDSTLIMQLLRDNLTLWTSDITDDAGDEIK 301
            A+ +L AY++A   A A+LAPTHPIRLGLALNFSVFYYEILNSP+RAC+LAKQAFDEAI+ELD+L EESYKDSTLIMQLLRDN TLWTSD+ ++ G+  K
Sbjct:  145 ADQSLKAYEAATATASADLAPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLSEESYKDSTLIMQLLRDNFTLWTSDL-EEGGEHSK 243          
BLAST of CF832834 vs. ExPASy Swiss-Prot
Match: 1433_CANAL (14-3-3 protein homolog OS=Candida albicans GN=BMH1 PE=1 SV=2)

HSP 1 Score: 149.828 bits (377), Expect = 9.569e-36
Identity = 73/110 (66.36%), Postives = 91/110 (82.73%), Query Frame = 2
Query:    2 AESTLLAYKSAQDIALAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAISELDTLGEESYKDSTLIMQLLRDNLTLWTSDITDDAGDEIKEAASKRESGE 331
            A+ +L AYK+A D+A+ EL PTHPIRLGLALNFSVFYYEILNSPDRAC+LAKQAFD+A+++L+TL E+SYKDSTLIMQLLRDNLTLWT      A  E ++ +S+  + +
Sbjct:  146 ADLSLEAYKAASDVAVTELPPTHPIRLGLALNFSVFYYEILNSPDRACHLAKQAFDDAVADLETLSEDSYKDSTLIMQLLRDNLTLWTDLSEAPAATEEQQQSSQAPAAQ 255          
BLAST of CF832834 vs. ExPASy Swiss-Prot
Match: 1433_TRIHA (14-3-3 protein homolog OS=Trichoderma harzianum PE=2 SV=1)

HSP 1 Score: 149.058 bits (375), Expect = 1.632e-35
Identity = 72/89 (80.90%), Postives = 82/89 (92.13%), Query Frame = 2
Query:    2 AESTLLAYKSAQDIALAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAISELDTLGEESYKDSTLIMQLLRDNLTLWTS 268
            A+ +L AYK+A ++A  EL PTHPIRLGLALNFSVFYYEILN+PD+AC+LAKQAFD+AI+ELDTL EESYKDSTLIMQLLRDNLTLWTS
Sbjct:  144 ADKSLEAYKAATEVAQTELPPTHPIRLGLALNFSVFYYEILNAPDQACHLAKQAFDDAIAELDTLSEESYKDSTLIMQLLRDNLTLWTS 232          
BLAST of CF832834 vs. ExPASy Swiss-Prot
Match: 1433Z_BOMMO (14-3-3 protein zeta OS=Bombyx mori GN=14-3-3zeta PE=2 SV=2)

HSP 1 Score: 148.288 bits (373), Expect = 2.784e-35
Identity = 75/100 (75.00%), Postives = 85/100 (85.00%), Query Frame = 2
Query:    5 ESTLLAYKSAQDIALAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAISELDTLGEESYKDSTLIMQLLRDNLTLWTSDITDDAGDEIKE 304
            E +  AY+ A +I+ A++ PTHPIRLGLALNFSVFYYEILNSPD+AC LAKQAFD+AI+ELDTL E+SYKDSTLIMQLLRDNLTLWTSD   D GDE  E
Sbjct:  145 EDSQKAYQDAFEISKAKMQPTHPIRLGLALNFSVFYYEILNSPDKACQLAKQAFDDAIAELDTLNEDSYKDSTLIMQLLRDNLTLWTSDTQGD-GDEPAE 243          
BLAST of CF832834 vs. ExPASy Swiss-Prot
Match: 1433B_CHICK (14-3-3 protein beta/alpha OS=Gallus gallus GN=YWHAB PE=2 SV=1)

HSP 1 Score: 147.517 bits (371), Expect = 4.749e-35
Identity = 72/91 (79.12%), Postives = 80/91 (87.91%), Query Frame = 2
Query:   20 AYKSAQDIALAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAISELDTLGEESYKDSTLIMQLLRDNLTLWTSDITDDAGD 292
            AY+ A +I+  E+ PTHPIRLGLALNFSVFYYEILNSP++ACNLAK AFDEAI+ELDTL EESYKDSTLIMQLLRDNLTLWTS+   D GD
Sbjct:  148 AYQEAFEISKKEMQPTHPIRLGLALNFSVFYYEILNSPEKACNLAKTAFDEAIAELDTLNEESYKDSTLIMQLLRDNLTLWTSENQGDEGD 238          
BLAST of CF832834 vs. ExPASy Swiss-Prot
Match: 14310_ARATH (14-3-3-like protein GF14 epsilon OS=Arabidopsis thaliana GN=GRF10 PE=2 SV=1)

HSP 1 Score: 147.517 bits (371), Expect = 4.749e-35
Identity = 73/102 (71.57%), Postives = 85/102 (83.33%), Query Frame = 2
Query:    2 AESTLLAYKSAQDIALAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAISELDTLGEESYKDSTLIMQLLRDNLTLWTSDITDDAGDEIKEA 307
            A+ +L AYK+A   A   LAPTHP+RLGLALNFSVFYYEILNSP+ AC LAKQAFD+AI+ELD+L EESYKDSTLIMQLLRDNLTLWTSD+ ++  +  K A
Sbjct:  146 ADQSLEAYKAAVAAAENGLAPTHPVRLGLALNFSVFYYEILNSPESACQLAKQAFDDAIAELDSLNEESYKDSTLIMQLLRDNLTLWTSDLNEEGDERTKGA 247          
BLAST of CF832834 vs. ExPASy Swiss-Prot
Match: 143BB_XENLA (14-3-3 protein beta/alpha-B OS=Xenopus laevis GN=ywhab-B PE=2 SV=1)

HSP 1 Score: 146.747 bits (369), Expect = 8.101e-35
Identity = 70/94 (74.47%), Postives = 82/94 (87.23%), Query Frame = 2
Query:   20 AYKSAQDIALAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAISELDTLGEESYKDSTLIMQLLRDNLTLWTSDITDDAGDEIK 301
            AY+ A +I+ +E+ PTHPIRLGLALNFSVFYYEILNSPD+AC+LAK AFDEAI+ELDTL EESYKDSTLIMQLLRDNLTLWTS+   +  D ++
Sbjct:  148 AYQEAFEISKSEMQPTHPIRLGLALNFSVFYYEILNSPDKACSLAKSAFDEAIAELDTLNEESYKDSTLIMQLLRDNLTLWTSETQGEEADNVE 241          
The following BLAST results are available for this feature:
BLAST of CF832834 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 143
Match NameE-valueIdentityDescription
BMH1_YEAST1.928e-3670.48Protein BMH1 OS=Saccharomyces cerevisiae GN=BMH1 P... [more]
RAD25_SCHPO3.289e-3671.82DNA damage checkpoint protein rad25 OS=Schizosacch... [more]
14337_SOLLC4.295e-3675.0014-3-3 protein 7 OS=Solanum lycopersicum GN=TFT7 P... [more]
1433_TOBAC5.610e-3675.0014-3-3-like protein OS=Nicotiana tabacum PE=2 SV=1[more]
1433_CANAL9.569e-3666.3614-3-3 protein homolog OS=Candida albicans GN=BMH1... [more]
1433_TRIHA1.632e-3580.9014-3-3 protein homolog OS=Trichoderma harzianum PE... [more]
1433Z_BOMMO2.784e-3575.0014-3-3 protein zeta OS=Bombyx mori GN=14-3-3zeta P... [more]
1433B_CHICK4.749e-3579.1214-3-3 protein beta/alpha OS=Gallus gallus GN=YWHA... [more]
14310_ARATH4.749e-3571.5714-3-3-like protein GF14 epsilon OS=Arabidopsis th... [more]
143BB_XENLA8.101e-3574.4714-3-3 protein beta/alpha-B OS=Xenopus laevis GN=y... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_02I09_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa02I09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832834 ID=CF832834; Name=CF832834; organism=Citrus sinensis; type=EST; length=598bp
TGCGGAGAGCACTTTGTTGGCCTACAAGTCAGCTCAGGATATTGCTTTAG
CTGAATTGGCCCCTACTCACCCCATAAGGCTGGGACTTGCACTCAACTTC
TCTGTGTTCTACTATGAAATCCTTAACTCACCAGATCGTGCATGCAATCT
TGCGAAGCAGGCTTTTGATGAGGCCATTTCTGAGCTTGATACCTTGGGTG
AAGAATCATACAAGGACAGTACATTGATTATGCAGCTTCTCCGAGATAAT
CTGACACTTTGGACTTCTGATATCACTGATGATGCTGGAGATGAGATTAA
GGAAGCAGCATCAAAACGTGAATCAGGGGAGACGCAGCAGTGATGAATAA
TGAGTTCAGTTCATAGGATATGTATCTGTATTTTTATCTTGTGGCTTTTA
TTTTACATGGATGCCATGTGGGTTGTTTTAGCAGGATATTCTCATGAACT
GATAATCTTGAGTGTTGGCTGCACTTAGGGTTCATGTGTTCCAACAGATT
GTAAACTAGATTTAATTATTGATGAGAAGTATTTGGTTTGGGTTTCATAT
GTAGTGTTTTCAGTGCTATGCTAAACTTTAGAATTGAAATTAAAAAAA
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