CF832834

Overview
NameCF832834
Unique NameCF832834
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length598
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig7580 contig Csv1_Contig7580:571..1169. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF832834 vs. ExPASy Swiss-Prot
Match: 1433Z_AEDAE (14-3-3 protein zeta OS=Aedes aegypti GN=14-3-3zeta PE=2 SV=1)

HSP 1 Score: 146.747 bits (369), Expect = 8.101e-35
Identity = 73/95 (76.84%), Postives = 83/95 (87.37%), Query Frame = 2
Query:   20 AYKSAQDIALAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAISELDTLGEESYKDSTLIMQLLRDNLTLWTSDITDDAGDEIKE 304
            AY+ A +I+  ++ PTHPIRLGLALNFSVFYYEILNSPD+AC LAKQAFD+AI+ELDTL E+SYKDSTLIMQLLRDNLTLWTSD   D GDE +E
Sbjct:  151 AYQDAFEISKGKMQPTHPIRLGLALNFSVFYYEILNSPDKACQLAKQAFDDAIAELDTLNEDSYKDSTLIMQLLRDNLTLWTSDTQGD-GDEPQE 244          
BLAST of CF832834 vs. ExPASy Swiss-Prot
Match: 14332_SCHMA (14-3-3 protein homolog 2 (Fragment) OS=Schistosoma mansoni PE=2 SV=1)

HSP 1 Score: 146.362 bits (368), Expect = 1.058e-34
Identity = 72/93 (77.42%), Postives = 80/93 (86.02%), Query Frame = 2
Query:    5 ESTLLAYKSAQDIALAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAISELDTLGEESYKDSTLIMQLLRDNLTLWTSDITDD 283
            E +  AY  A DIA  ++ PTHPIRLGLALNFSVFYYEILN+PDRAC+LAKQAFD+AI+ELDTL E+SYKDSTLIMQLLRDNLTLWTSD   D
Sbjct:  112 EESQRAYNDAFDIAKNQMQPTHPIRLGLALNFSVFYYEILNAPDRACHLAKQAFDDAIAELDTLNEDSYKDSTLIMQLLRDNLTLWTSDTGGD 204          
BLAST of CF832834 vs. ExPASy Swiss-Prot
Match: 14331_CAEEL (14-3-3-like protein 1 OS=Caenorhabditis elegans GN=par-5 PE=1 SV=2)

HSP 1 Score: 146.362 bits (368), Expect = 1.058e-34
Identity = 74/108 (68.52%), Postives = 87/108 (80.56%), Query Frame = 2
Query:    5 ESTLLAYKSAQDIALAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAISELDTLGEESYKDSTLIMQLLRDNLTLWTSDITDDAGDEIKEAASKRESG 328
            E +  AY+ A DIA  ++ PTHPIRLGLALNFSVFYYEILN+P+ AC LAKQAFD+AI+ELDTL E+SYKDSTLIMQLLRDNLTLWTSD+    G E +E    +E+G
Sbjct:  144 EKSQKAYQEALDIAKDKMQPTHPIRLGLALNFSVFYYEILNTPEHACQLAKQAFDDAIAELDTLNEDSYKDSTLIMQLLRDNLTLWTSDV----GAEDQEQEGNQEAG 247          
BLAST of CF832834 vs. ExPASy Swiss-Prot
Match: 14338_SOLLC (14-3-3 protein 8 OS=Solanum lycopersicum GN=TFT8 PE=2 SV=2)

HSP 1 Score: 145.976 bits (367), Expect = 1.382e-34
Identity = 75/111 (67.57%), Postives = 91/111 (81.98%), Query Frame = 2
Query:    2 AESTLLAYKSAQDIALAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAISELDTLGEESYKDSTLIMQLLRDNLTLWTSDITDDAGDEIK-EAASKRESGE 331
            ++ +L AY++A   A AEL  THPIRLGLALNFSVFYYEI+NSP+RAC LAKQ FDEAISELD+L E++YKD TLI+QLLRDNLTLWTSDI +D  +  K +AA+K  +GE
Sbjct:  148 SDLSLKAYQTATTTAEAELPITHPIRLGLALNFSVFYYEIMNSPERACQLAKQVFDEAISELDSLNEDNYKDGTLILQLLRDNLTLWTSDIPEDGEEAPKGDAANKVGAGE 258          
BLAST of CF832834 vs. ExPASy Swiss-Prot
Match: 143B1_ONCMY (14-3-3 protein beta/alpha-1 OS=Oncorhynchus mykiss PE=2 SV=1)

HSP 1 Score: 145.591 bits (366), Expect = 1.805e-34
Identity = 71/96 (73.96%), Postives = 83/96 (86.46%), Query Frame = 2
Query:    5 ESTLLAYKSAQDIALAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAISELDTLGEESYKDSTLIMQLLRDNLTLWTSDITDDAGD 292
            E++  AY+ A DI+  ++ PTHPIRLGLALNFSVFYYEILNSP++AC+LAK AFDEAI+ELDTL E+SYKDSTLIMQLLRDNLTLWTS+   D GD
Sbjct:  143 ENSQQAYQEAFDISKKDMQPTHPIRLGLALNFSVFYYEILNSPEQACSLAKAAFDEAIAELDTLNEDSYKDSTLIMQLLRDNLTLWTSENQGDEGD 238          
BLAST of CF832834 vs. ExPASy Swiss-Prot
Match: 1433Z_DROME (14-3-3 protein zeta OS=Drosophila melanogaster GN=14-3-3zeta PE=1 SV=1)

HSP 1 Score: 145.591 bits (366), Expect = 1.805e-34
Identity = 70/91 (76.92%), Postives = 79/91 (86.81%), Query Frame = 2
Query:   20 AYKSAQDIALAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAISELDTLGEESYKDSTLIMQLLRDNLTLWTSDITDDAGD 292
            AY+ A DI+  ++ PTHPIRLGLALNFSVFYYEILNSPD+AC LAKQAFD+AI+ELDTL E+SYKDSTLIMQLLRDNLTLWTSD   D  +
Sbjct:  151 AYQDAFDISKGKMQPTHPIRLGLALNFSVFYYEILNSPDKACQLAKQAFDDAIAELDTLNEDSYKDSTLIMQLLRDNLTLWTSDTQGDEAE 241          
BLAST of CF832834 vs. ExPASy Swiss-Prot
Match: 1433B_RAT (14-3-3 protein beta/alpha OS=Rattus norvegicus GN=Ywhab PE=1 SV=3)

HSP 1 Score: 145.591 bits (366), Expect = 1.805e-34
Identity = 71/91 (78.02%), Postives = 80/91 (87.91%), Query Frame = 2
Query:   20 AYKSAQDIALAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAISELDTLGEESYKDSTLIMQLLRDNLTLWTSDITDDAGD 292
            AY+ A +I+  E+ PTHPIRLGLALNFSVFYYEILNSP++AC+LAK AFDEAI+ELDTL EESYKDSTLIMQLLRDNLTLWTS+   D GD
Sbjct:  150 AYQEAFEISKKEMQPTHPIRLGLALNFSVFYYEILNSPEKACSLAKTAFDEAIAELDTLNEESYKDSTLIMQLLRDNLTLWTSENQGDEGD 240          
BLAST of CF832834 vs. ExPASy Swiss-Prot
Match: 1433B_PONAB (14-3-3 protein beta/alpha OS=Pongo abelii GN=YWHAB PE=3 SV=1)

HSP 1 Score: 145.591 bits (366), Expect = 1.805e-34
Identity = 71/91 (78.02%), Postives = 80/91 (87.91%), Query Frame = 2
Query:   20 AYKSAQDIALAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAISELDTLGEESYKDSTLIMQLLRDNLTLWTSDITDDAGD 292
            AY+ A +I+  E+ PTHPIRLGLALNFSVFYYEILNSP++AC+LAK AFDEAI+ELDTL EESYKDSTLIMQLLRDNLTLWTS+   D GD
Sbjct:  150 AYQEAFEISKKEMQPTHPIRLGLALNFSVFYYEILNSPEKACSLAKTAFDEAIAELDTLNEESYKDSTLIMQLLRDNLTLWTSENQGDEGD 240          
BLAST of CF832834 vs. ExPASy Swiss-Prot
Match: 1433B_MOUSE (14-3-3 protein beta/alpha OS=Mus musculus GN=Ywhab PE=1 SV=3)

HSP 1 Score: 145.591 bits (366), Expect = 1.805e-34
Identity = 71/91 (78.02%), Postives = 80/91 (87.91%), Query Frame = 2
Query:   20 AYKSAQDIALAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAISELDTLGEESYKDSTLIMQLLRDNLTLWTSDITDDAGD 292
            AY+ A +I+  E+ PTHPIRLGLALNFSVFYYEILNSP++AC+LAK AFDEAI+ELDTL EESYKDSTLIMQLLRDNLTLWTS+   D GD
Sbjct:  150 AYQEAFEISKKEMQPTHPIRLGLALNFSVFYYEILNSPEKACSLAKTAFDEAIAELDTLNEESYKDSTLIMQLLRDNLTLWTSENQGDEGD 240          
BLAST of CF832834 vs. ExPASy Swiss-Prot
Match: 1433B_MACFA (14-3-3 protein beta/alpha OS=Macaca fascicularis GN=YWHAB PE=2 SV=3)

HSP 1 Score: 145.591 bits (366), Expect = 1.805e-34
Identity = 71/91 (78.02%), Postives = 80/91 (87.91%), Query Frame = 2
Query:   20 AYKSAQDIALAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAISELDTLGEESYKDSTLIMQLLRDNLTLWTSDITDDAGD 292
            AY+ A +I+  E+ PTHPIRLGLALNFSVFYYEILNSP++AC+LAK AFDEAI+ELDTL EESYKDSTLIMQLLRDNLTLWTS+   D GD
Sbjct:  150 AYQEAFEISKKEMQPTHPIRLGLALNFSVFYYEILNSPEKACSLAKTAFDEAIAELDTLNEESYKDSTLIMQLLRDNLTLWTSENQGDEGD 240          
The following BLAST results are available for this feature:
BLAST of CF832834 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 143
Match NameE-valueIdentityDescription
1433Z_AEDAE8.101e-3576.8414-3-3 protein zeta OS=Aedes aegypti GN=14-3-3zeta... [more]
14332_SCHMA1.058e-3477.4214-3-3 protein homolog 2 (Fragment) OS=Schistosoma... [more]
14331_CAEEL1.058e-3468.5214-3-3-like protein 1 OS=Caenorhabditis elegans GN... [more]
14338_SOLLC1.382e-3467.5714-3-3 protein 8 OS=Solanum lycopersicum GN=TFT8 P... [more]
143B1_ONCMY1.805e-3473.9614-3-3 protein beta/alpha-1 OS=Oncorhynchus mykiss... [more]
1433Z_DROME1.805e-3476.9214-3-3 protein zeta OS=Drosophila melanogaster GN=... [more]
1433B_RAT1.805e-3478.0214-3-3 protein beta/alpha OS=Rattus norvegicus GN=... [more]
1433B_PONAB1.805e-3478.0214-3-3 protein beta/alpha OS=Pongo abelii GN=YWHAB... [more]
1433B_MOUSE1.805e-3478.0214-3-3 protein beta/alpha OS=Mus musculus GN=Ywhab... [more]
1433B_MACFA1.805e-3478.0214-3-3 protein beta/alpha OS=Macaca fascicularis G... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_02I09_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa02I09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832834 ID=CF832834; Name=CF832834; organism=Citrus sinensis; type=EST; length=598bp
TGCGGAGAGCACTTTGTTGGCCTACAAGTCAGCTCAGGATATTGCTTTAG
CTGAATTGGCCCCTACTCACCCCATAAGGCTGGGACTTGCACTCAACTTC
TCTGTGTTCTACTATGAAATCCTTAACTCACCAGATCGTGCATGCAATCT
TGCGAAGCAGGCTTTTGATGAGGCCATTTCTGAGCTTGATACCTTGGGTG
AAGAATCATACAAGGACAGTACATTGATTATGCAGCTTCTCCGAGATAAT
CTGACACTTTGGACTTCTGATATCACTGATGATGCTGGAGATGAGATTAA
GGAAGCAGCATCAAAACGTGAATCAGGGGAGACGCAGCAGTGATGAATAA
TGAGTTCAGTTCATAGGATATGTATCTGTATTTTTATCTTGTGGCTTTTA
TTTTACATGGATGCCATGTGGGTTGTTTTAGCAGGATATTCTCATGAACT
GATAATCTTGAGTGTTGGCTGCACTTAGGGTTCATGTGTTCCAACAGATT
GTAAACTAGATTTAATTATTGATGAGAAGTATTTGGTTTGGGTTTCATAT
GTAGTGTTTTCAGTGCTATGCTAAACTTTAGAATTGAAATTAAAAAAA
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