CF832834

Overview
NameCF832834
Unique NameCF832834
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length598
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF832834 vs. ExPASy Swiss-Prot
Match: 1433B_HUMAN (14-3-3 protein beta/alpha OS=Homo sapiens GN=YWHAB PE=1 SV=3)

HSP 1 Score: 145.591 bits (366), Expect = 1.805e-34
Identity = 71/91 (78.02%), Postives = 80/91 (87.91%), Query Frame = 2
Query:   20 AYKSAQDIALAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAISELDTLGEESYKDSTLIMQLLRDNLTLWTSDITDDAGD 292
            AY+ A +I+  E+ PTHPIRLGLALNFSVFYYEILNSP++AC+LAK AFDEAI+ELDTL EESYKDSTLIMQLLRDNLTLWTS+   D GD
Sbjct:  150 AYQEAFEISKKEMQPTHPIRLGLALNFSVFYYEILNSPEKACSLAKTAFDEAIAELDTLNEESYKDSTLIMQLLRDNLTLWTSENQGDEGD 240          
BLAST of CF832834 vs. ExPASy Swiss-Prot
Match: 1433B_BOVIN (14-3-3 protein beta/alpha OS=Bos taurus GN=YWHAB PE=1 SV=2)

HSP 1 Score: 145.591 bits (366), Expect = 1.805e-34
Identity = 71/91 (78.02%), Postives = 80/91 (87.91%), Query Frame = 2
Query:   20 AYKSAQDIALAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAISELDTLGEESYKDSTLIMQLLRDNLTLWTSDITDDAGD 292
            AY+ A +I+  E+ PTHPIRLGLALNFSVFYYEILNSP++AC+LAK AFDEAI+ELDTL EESYKDSTLIMQLLRDNLTLWTS+   D GD
Sbjct:  150 AYQEAFEISKKEMQPTHPIRLGLALNFSVFYYEILNSPEKACSLAKTAFDEAIAELDTLNEESYKDSTLIMQLLRDNLTLWTSENQGDEGD 240          
BLAST of CF832834 vs. ExPASy Swiss-Prot
Match: 1433Z_XENLA (14-3-3 protein zeta OS=Xenopus laevis GN=ywhaz PE=2 SV=2)

HSP 1 Score: 145.206 bits (365), Expect = 2.357e-34
Identity = 71/92 (77.17%), Postives = 78/92 (84.78%), Query Frame = 2
Query:   20 AYKSAQDIALAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAISELDTLGEESYKDSTLIMQLLRDNLTLWTSDITDDAGDE 295
            AY+ A DI+  E+ PTHPIRLGLALNFSVFYYEILN PD+AC LAK AFDEAI+ELDTL EESYKDSTLIMQLLRDNLTLWTSD   D  ++
Sbjct:  148 AYQDAFDISKTEMQPTHPIRLGLALNFSVFYYEILNCPDKACALAKAAFDEAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSDTQGDEAEQ 239          
BLAST of CF832834 vs. ExPASy Swiss-Prot
Match: 143BA_XENLA (14-3-3 protein beta/alpha-A OS=Xenopus laevis GN=ywhab-A PE=2 SV=1)

HSP 1 Score: 144.821 bits (364), Expect = 3.078e-34
Identity = 70/98 (71.43%), Postives = 84/98 (85.71%), Query Frame = 2
Query:    8 STLLAYKSAQDIALAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAISELDTLGEESYKDSTLIMQLLRDNLTLWTSDITDDAGDEIK 301
            S+  AY+ A +I+ +E+ PTHPIRLGLALNFSVFYYEILNSP++AC+LAK AFDEAI+ELDTL EESYKDSTLIMQLLRDNLTLWTS+   +  D ++
Sbjct:  144 SSQQAYQEAFEISKSEMQPTHPIRLGLALNFSVFYYEILNSPEKACSLAKSAFDEAIAELDTLNEESYKDSTLIMQLLRDNLTLWTSENQGEEADNVE 241          
BLAST of CF832834 vs. ExPASy Swiss-Prot
Match: 1433Z_XENTR (14-3-3 protein zeta OS=Xenopus tropicalis GN=ywhaz PE=2 SV=1)

HSP 1 Score: 144.821 bits (364), Expect = 3.078e-34
Identity = 70/92 (76.09%), Postives = 79/92 (85.87%), Query Frame = 2
Query:   20 AYKSAQDIALAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAISELDTLGEESYKDSTLIMQLLRDNLTLWTSDITDDAGDE 295
            AY+ A DI+  E+ PTHPIRLGLALNFSVFYYEILN P++AC+LAK AFDEAI+ELDTL EESYKDSTLIMQLLRDNLTLWTSD   D  ++
Sbjct:  148 AYQDAFDISKTEMQPTHPIRLGLALNFSVFYYEILNCPEKACSLAKAAFDEAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSDTQGDEAEQ 239          
BLAST of CF832834 vs. ExPASy Swiss-Prot
Match: 1433Z_CHICK (14-3-3 protein zeta OS=Gallus gallus GN=YWHAZ PE=2 SV=1)

HSP 1 Score: 144.821 bits (364), Expect = 3.078e-34
Identity = 71/96 (73.96%), Postives = 81/96 (84.38%), Query Frame = 2
Query:    5 ESTLLAYKSAQDIALAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAISELDTLGEESYKDSTLIMQLLRDNLTLWTSDITDDAGD 292
            E +  AY+ A +I+  E+ PTHPIRLGLALNFSVFYYEILNSP++AC+LAK AFDEAI+ELDTL EESYKDSTLIMQLLRDNLTLWTSD   D  +
Sbjct:  143 EQSQQAYQEAFEISKKEMQPTHPIRLGLALNFSVFYYEILNSPEKACSLAKTAFDEAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSDTQGDEAE 238          
BLAST of CF832834 vs. ExPASy Swiss-Prot
Match: 143B1_DANRE (14-3-3 protein beta/alpha-1 OS=Danio rerio GN=ywhab1 PE=2 SV=2)

HSP 1 Score: 144.05 bits (362), Expect = 5.251e-34
Identity = 70/96 (72.92%), Postives = 83/96 (86.46%), Query Frame = 2
Query:    5 ESTLLAYKSAQDIALAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAISELDTLGEESYKDSTLIMQLLRDNLTLWTSDITDDAGD 292
            E++  AY+ A +I+  E+ PTHPIRLGLALNFSVFYYEILN+P++AC+LAK AFDEAI+ELDTL E+SYKDSTLIMQLLRDNLTLWTS+   D GD
Sbjct:  143 ENSQKAYQDAFEISKKEMQPTHPIRLGLALNFSVFYYEILNTPEQACSLAKTAFDEAIAELDTLNEDSYKDSTLIMQLLRDNLTLWTSENQGDEGD 238          
BLAST of CF832834 vs. ExPASy Swiss-Prot
Match: 1433_XENLA (14-3-3-like protein (Fragment) OS=Xenopus laevis PE=2 SV=1)

HSP 1 Score: 144.05 bits (362), Expect = 5.251e-34
Identity = 70/98 (71.43%), Postives = 83/98 (84.69%), Query Frame = 2
Query:    8 STLLAYKSAQDIALAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAISELDTLGEESYKDSTLIMQLLRDNLTLWTSDITDDAGDEIK 301
            S+  AY+ A +I+ +E+ PTHPIRLGLALNFSVFYYEILNSP++AC+LAK AFDEAI ELDTL EESYKDSTLIMQLLRDNLTLWTS+   +  D ++
Sbjct:  135 SSQQAYQEAFEISKSEMQPTHPIRLGLALNFSVFYYEILNSPEKACSLAKSAFDEAIRELDTLNEESYKDSTLIMQLLRDNLTLWTSENQGEEADNVE 232          
BLAST of CF832834 vs. ExPASy Swiss-Prot
Match: 1433Z_SHEEP (14-3-3 protein zeta/delta OS=Ovis aries GN=YWHAZ PE=1 SV=1)

HSP 1 Score: 144.05 bits (362), Expect = 5.251e-34
Identity = 70/91 (76.92%), Postives = 79/91 (86.81%), Query Frame = 2
Query:   20 AYKSAQDIALAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAISELDTLGEESYKDSTLIMQLLRDNLTLWTSDITDDAGD 292
            AY+ A +I+  E+ PTHPIRLGLALNFSVFYYEILNSP++AC+LAK AFDEAI+ELDTL EESYKDSTLIMQLLRDNLTLWTSD   D  +
Sbjct:  148 AYQEAFEISKKEMQPTHPIRLGLALNFSVFYYEILNSPEKACSLAKTAFDEAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSDTQGDEAE 238          
BLAST of CF832834 vs. ExPASy Swiss-Prot
Match: 1433Z_RAT (14-3-3 protein zeta/delta OS=Rattus norvegicus GN=Ywhaz PE=1 SV=1)

HSP 1 Score: 144.05 bits (362), Expect = 5.251e-34
Identity = 70/91 (76.92%), Postives = 79/91 (86.81%), Query Frame = 2
Query:   20 AYKSAQDIALAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAISELDTLGEESYKDSTLIMQLLRDNLTLWTSDITDDAGD 292
            AY+ A +I+  E+ PTHPIRLGLALNFSVFYYEILNSP++AC+LAK AFDEAI+ELDTL EESYKDSTLIMQLLRDNLTLWTSD   D  +
Sbjct:  148 AYQEAFEISKKEMQPTHPIRLGLALNFSVFYYEILNSPEKACSLAKTAFDEAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSDTQGDEAE 238          
The following BLAST results are available for this feature:
BLAST of CF832834 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 143
Match NameE-valueIdentityDescription
1433B_HUMAN1.805e-3478.0214-3-3 protein beta/alpha OS=Homo sapiens GN=YWHAB... [more]
1433B_BOVIN1.805e-3478.0214-3-3 protein beta/alpha OS=Bos taurus GN=YWHAB P... [more]
1433Z_XENLA2.357e-3477.1714-3-3 protein zeta OS=Xenopus laevis GN=ywhaz PE=... [more]
143BA_XENLA3.078e-3471.4314-3-3 protein beta/alpha-A OS=Xenopus laevis GN=y... [more]
1433Z_XENTR3.078e-3476.0914-3-3 protein zeta OS=Xenopus tropicalis GN=ywhaz... [more]
1433Z_CHICK3.078e-3473.9614-3-3 protein zeta OS=Gallus gallus GN=YWHAZ PE=2... [more]
143B1_DANRE5.251e-3472.9214-3-3 protein beta/alpha-1 OS=Danio rerio GN=ywha... [more]
1433_XENLA5.251e-3471.4314-3-3-like protein (Fragment) OS=Xenopus laevis P... [more]
1433Z_SHEEP5.251e-3476.9214-3-3 protein zeta/delta OS=Ovis aries GN=YWHAZ P... [more]
1433Z_RAT5.251e-3476.9214-3-3 protein zeta/delta OS=Rattus norvegicus GN=... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_02I09_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa02I09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832834 ID=CF832834; Name=CF832834; organism=Citrus sinensis; type=EST; length=598bp
TGCGGAGAGCACTTTGTTGGCCTACAAGTCAGCTCAGGATATTGCTTTAG
CTGAATTGGCCCCTACTCACCCCATAAGGCTGGGACTTGCACTCAACTTC
TCTGTGTTCTACTATGAAATCCTTAACTCACCAGATCGTGCATGCAATCT
TGCGAAGCAGGCTTTTGATGAGGCCATTTCTGAGCTTGATACCTTGGGTG
AAGAATCATACAAGGACAGTACATTGATTATGCAGCTTCTCCGAGATAAT
CTGACACTTTGGACTTCTGATATCACTGATGATGCTGGAGATGAGATTAA
GGAAGCAGCATCAAAACGTGAATCAGGGGAGACGCAGCAGTGATGAATAA
TGAGTTCAGTTCATAGGATATGTATCTGTATTTTTATCTTGTGGCTTTTA
TTTTACATGGATGCCATGTGGGTTGTTTTAGCAGGATATTCTCATGAACT
GATAATCTTGAGTGTTGGCTGCACTTAGGGTTCATGTGTTCCAACAGATT
GTAAACTAGATTTAATTATTGATGAGAAGTATTTGGTTTGGGTTTCATAT
GTAGTGTTTTCAGTGCTATGCTAAACTTTAGAATTGAAATTAAAAAAA
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