CF832834

Overview
NameCF832834
Unique NameCF832834
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length598
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig7580 contig Csv1_Contig7580:571..1169. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF832834 vs. ExPASy Swiss-Prot
Match: 1433Z_PONAB (14-3-3 protein zeta/delta OS=Pongo abelii GN=YWHAZ PE=2 SV=1)

HSP 1 Score: 144.05 bits (362), Expect = 5.251e-34
Identity = 70/91 (76.92%), Postives = 79/91 (86.81%), Query Frame = 2
Query:   20 AYKSAQDIALAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAISELDTLGEESYKDSTLIMQLLRDNLTLWTSDITDDAGD 292
            AY+ A +I+  E+ PTHPIRLGLALNFSVFYYEILNSP++AC+LAK AFDEAI+ELDTL EESYKDSTLIMQLLRDNLTLWTSD   D  +
Sbjct:  148 AYQEAFEISKKEMQPTHPIRLGLALNFSVFYYEILNSPEKACSLAKTAFDEAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSDTQGDEAE 238          
BLAST of CF832834 vs. ExPASy Swiss-Prot
Match: 1433Z_MOUSE (14-3-3 protein zeta/delta OS=Mus musculus GN=Ywhaz PE=1 SV=1)

HSP 1 Score: 144.05 bits (362), Expect = 5.251e-34
Identity = 70/91 (76.92%), Postives = 79/91 (86.81%), Query Frame = 2
Query:   20 AYKSAQDIALAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAISELDTLGEESYKDSTLIMQLLRDNLTLWTSDITDDAGD 292
            AY+ A +I+  E+ PTHPIRLGLALNFSVFYYEILNSP++AC+LAK AFDEAI+ELDTL EESYKDSTLIMQLLRDNLTLWTSD   D  +
Sbjct:  148 AYQEAFEISKKEMQPTHPIRLGLALNFSVFYYEILNSPEKACSLAKTAFDEAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSDTQGDEAE 238          
BLAST of CF832834 vs. ExPASy Swiss-Prot
Match: 1433Z_HUMAN (14-3-3 protein zeta/delta OS=Homo sapiens GN=YWHAZ PE=1 SV=1)

HSP 1 Score: 144.05 bits (362), Expect = 5.251e-34
Identity = 70/91 (76.92%), Postives = 79/91 (86.81%), Query Frame = 2
Query:   20 AYKSAQDIALAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAISELDTLGEESYKDSTLIMQLLRDNLTLWTSDITDDAGD 292
            AY+ A +I+  E+ PTHPIRLGLALNFSVFYYEILNSP++AC+LAK AFDEAI+ELDTL EESYKDSTLIMQLLRDNLTLWTSD   D  +
Sbjct:  148 AYQEAFEISKKEMQPTHPIRLGLALNFSVFYYEILNSPEKACSLAKTAFDEAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSDTQGDEAE 238          
BLAST of CF832834 vs. ExPASy Swiss-Prot
Match: 1433Z_BOVIN (14-3-3 protein zeta/delta OS=Bos taurus GN=YWHAZ PE=1 SV=1)

HSP 1 Score: 144.05 bits (362), Expect = 5.251e-34
Identity = 70/91 (76.92%), Postives = 79/91 (86.81%), Query Frame = 2
Query:   20 AYKSAQDIALAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAISELDTLGEESYKDSTLIMQLLRDNLTLWTSDITDDAGD 292
            AY+ A +I+  E+ PTHPIRLGLALNFSVFYYEILNSP++AC+LAK AFDEAI+ELDTL EESYKDSTLIMQLLRDNLTLWTSD   D  +
Sbjct:  148 AYQEAFEISKKEMQPTHPIRLGLALNFSVFYYEILNSPEKACSLAKTAFDEAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSDTQGDEAE 238          
BLAST of CF832834 vs. ExPASy Swiss-Prot
Match: 14332_CAEEL (14-3-3-like protein 2 OS=Caenorhabditis elegans GN=ftt-2 PE=1 SV=1)

HSP 1 Score: 143.665 bits (361), Expect = 6.858e-34
Identity = 70/96 (72.92%), Postives = 81/96 (84.38%), Query Frame = 2
Query:    5 ESTLLAYKSAQDIALAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAISELDTLGEESYKDSTLIMQLLRDNLTLWTSDITDDAGD 292
            E +  +Y+ A DIA  ++ PTHPIRLGLALNFSVF+YEILN+PD+AC LAKQAFD+AI+ELDTL E+SYKDSTLIMQLLRDNLTLWTSD   D  D
Sbjct:  145 EKSQQSYQEAFDIAKDKMQPTHPIRLGLALNFSVFFYEILNAPDKACQLAKQAFDDAIAELDTLNEDSYKDSTLIMQLLRDNLTLWTSDAATDDTD 240          
BLAST of CF832834 vs. ExPASy Swiss-Prot
Match: 14311_ARATH (14-3-3-like protein GF14 omicron OS=Arabidopsis thaliana GN=GRF11 PE=2 SV=1)

HSP 1 Score: 143.665 bits (361), Expect = 6.858e-34
Identity = 70/93 (75.27%), Postives = 83/93 (89.25%), Query Frame = 2
Query:    2 AESTLLAYKSAQDIALAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAISELDTLGEESYKDSTLIMQLLRDNLTLWTSDITD 280
            A+ +L AY++A   A  EL+ THPIRLGLALNFSVFYYEILNSP+RAC+LAK+AFDEAI+ELD+L E+SYKDSTLIMQLLRDNLTLWTSD+ +
Sbjct:  146 ADLSLKAYEAATSSASTELSTTHPIRLGLALNFSVFYYEILNSPERACHLAKRAFDEAIAELDSLNEDSYKDSTLIMQLLRDNLTLWTSDLEE 238          
BLAST of CF832834 vs. ExPASy Swiss-Prot
Match: 1433B_XENTR (14-3-3 protein beta/alpha OS=Xenopus tropicalis GN=ywhab PE=2 SV=1)

HSP 1 Score: 142.895 bits (359), Expect = 1.170e-33
Identity = 69/91 (75.82%), Postives = 80/91 (87.91%), Query Frame = 2
Query:   20 AYKSAQDIALAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAISELDTLGEESYKDSTLIMQLLRDNLTLWTSDITDDAGD 292
            AY+ A +I+ +E+ PTHPIRLGLALNFSVFYYEILNSP++AC+LAK AFDEAI+ELDTL EESYKDSTLIMQLLRDNLTLWTS+   +  D
Sbjct:  148 AYQEAFEISKSEMQPTHPIRLGLALNFSVFYYEILNSPEKACSLAKSAFDEAIAELDTLNEESYKDSTLIMQLLRDNLTLWTSENQGEEAD 238          
BLAST of CF832834 vs. ExPASy Swiss-Prot
Match: 143GB_XENLA (14-3-3 protein gamma-B OS=Xenopus laevis GN=ywhag-B PE=2 SV=1)

HSP 1 Score: 142.124 bits (357), Expect = 1.995e-33
Identity = 69/97 (71.13%), Postives = 81/97 (83.51%), Query Frame = 2
Query:    5 ESTLLAYKSAQDIALAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAISELDTLGEESYKDSTLIMQLLRDNLTLWTSDITDDAGDE 295
            ES+  AY  A +I+   + PTHPIRLGLALN+SVFYYEI N+P++AC+LAK AFD+AI+ELDTL E+SYKDSTLIMQLLRDNLTLWTSD  DD G E
Sbjct:  148 ESSEKAYSEAHEISKEHMQPTHPIRLGLALNYSVFYYEIQNAPEQACHLAKTAFDDAIAELDTLNEDSYKDSTLIMQLLRDNLTLWTSDQQDDDGGE 244          
BLAST of CF832834 vs. ExPASy Swiss-Prot
Match: 143GA_XENLA (14-3-3 protein gamma-A OS=Xenopus laevis GN=ywhag-A PE=2 SV=1)

HSP 1 Score: 142.124 bits (357), Expect = 1.995e-33
Identity = 69/97 (71.13%), Postives = 81/97 (83.51%), Query Frame = 2
Query:    5 ESTLLAYKSAQDIALAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAISELDTLGEESYKDSTLIMQLLRDNLTLWTSDITDDAGDE 295
            ES+  AY  A +I+   + PTHPIRLGLALN+SVFYYEI N+P++AC+LAK AFD+AI+ELDTL E+SYKDSTLIMQLLRDNLTLWTSD  DD G E
Sbjct:  148 ESSEKAYSEAHEISKEHMQPTHPIRLGLALNYSVFYYEIQNAPEQACHLAKTAFDDAIAELDTLNEDSYKDSTLIMQLLRDNLTLWTSDQQDDDGGE 244          
BLAST of CF832834 vs. ExPASy Swiss-Prot
Match: 1433G_RAT (14-3-3 protein gamma OS=Rattus norvegicus GN=Ywhag PE=1 SV=2)

HSP 1 Score: 142.124 bits (357), Expect = 1.995e-33
Identity = 69/97 (71.13%), Postives = 81/97 (83.51%), Query Frame = 2
Query:    5 ESTLLAYKSAQDIALAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAISELDTLGEESYKDSTLIMQLLRDNLTLWTSDITDDAGDE 295
            ES+  AY  A +I+   + PTHPIRLGLALN+SVFYYEI N+P++AC+LAK AFD+AI+ELDTL E+SYKDSTLIMQLLRDNLTLWTSD  DD G E
Sbjct:  148 ESSEKAYSEAHEISKEHMQPTHPIRLGLALNYSVFYYEIQNAPEQACHLAKTAFDDAIAELDTLNEDSYKDSTLIMQLLRDNLTLWTSDQQDDDGGE 244          
The following BLAST results are available for this feature:
BLAST of CF832834 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 143
Match NameE-valueIdentityDescription
1433Z_PONAB5.251e-3476.9214-3-3 protein zeta/delta OS=Pongo abelii GN=YWHAZ... [more]
1433Z_MOUSE5.251e-3476.9214-3-3 protein zeta/delta OS=Mus musculus GN=Ywhaz... [more]
1433Z_HUMAN5.251e-3476.9214-3-3 protein zeta/delta OS=Homo sapiens GN=YWHAZ... [more]
1433Z_BOVIN5.251e-3476.9214-3-3 protein zeta/delta OS=Bos taurus GN=YWHAZ P... [more]
14332_CAEEL6.858e-3472.9214-3-3-like protein 2 OS=Caenorhabditis elegans GN... [more]
14311_ARATH6.858e-3475.2714-3-3-like protein GF14 omicron OS=Arabidopsis th... [more]
1433B_XENTR1.170e-3375.8214-3-3 protein beta/alpha OS=Xenopus tropicalis GN... [more]
143GB_XENLA1.995e-3371.1314-3-3 protein gamma-B OS=Xenopus laevis GN=ywhag-... [more]
143GA_XENLA1.995e-3371.1314-3-3 protein gamma-A OS=Xenopus laevis GN=ywhag-... [more]
1433G_RAT1.995e-3371.1314-3-3 protein gamma OS=Rattus norvegicus GN=Ywhag... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS02_02I09_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa02I09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832834 ID=CF832834; Name=CF832834; organism=Citrus sinensis; type=EST; length=598bp
TGCGGAGAGCACTTTGTTGGCCTACAAGTCAGCTCAGGATATTGCTTTAG
CTGAATTGGCCCCTACTCACCCCATAAGGCTGGGACTTGCACTCAACTTC
TCTGTGTTCTACTATGAAATCCTTAACTCACCAGATCGTGCATGCAATCT
TGCGAAGCAGGCTTTTGATGAGGCCATTTCTGAGCTTGATACCTTGGGTG
AAGAATCATACAAGGACAGTACATTGATTATGCAGCTTCTCCGAGATAAT
CTGACACTTTGGACTTCTGATATCACTGATGATGCTGGAGATGAGATTAA
GGAAGCAGCATCAAAACGTGAATCAGGGGAGACGCAGCAGTGATGAATAA
TGAGTTCAGTTCATAGGATATGTATCTGTATTTTTATCTTGTGGCTTTTA
TTTTACATGGATGCCATGTGGGTTGTTTTAGCAGGATATTCTCATGAACT
GATAATCTTGAGTGTTGGCTGCACTTAGGGTTCATGTGTTCCAACAGATT
GTAAACTAGATTTAATTATTGATGAGAAGTATTTGGTTTGGGTTTCATAT
GTAGTGTTTTCAGTGCTATGCTAAACTTTAGAATTGAAATTAAAAAAA
back to top