CF832837
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF832837 vs. ExPASy Swiss-Prot
Match: FER_SYNY4 (Ferredoxin OS=Synechocystis sp. (strain PCC 6714) PE=1 SV=2) HSP 1 Score: 134.806 bits (338), Expect = 3.713e-31 Identity = 65/98 (66.33%), Postives = 77/98 (78.57%), Query Frame = -2 Query: 123 MAVYKVKLIGPNGEENEFDAPDDAYIIDFAEDAGMELPYSCRGGACFTCAGQMVSGSVDQSDGSFLDDKQMEKGFVLTCVAYPTSDCGIYPPKEFELY 416 MA Y VKLI P+GE N + DD YI+D AE+AG++LPYSCR GAC TCAG++ +GSVDQSD SFLDD Q+E G+VLTCVAYPTSDC I KE +LY Sbjct: 1 MASYTVKLITPDGE-NSIECSDDTYILDAAEEAGLDLPYSCRAGACSTCAGKITAGSVDQSDQSFLDDDQIEAGYVLTCVAYPTSDCTIETHKEEDLY 97
BLAST of CF832837 vs. ExPASy Swiss-Prot
Match: FER_SYNY3 (Ferredoxin-1 OS=Synechocystis sp. (strain PCC 6803) GN=petF PE=1 SV=2) HSP 1 Score: 132.88 bits (333), Expect = 1.411e-30 Identity = 64/98 (65.31%), Postives = 77/98 (78.57%), Query Frame = -2 Query: 123 MAVYKVKLIGPNGEENEFDAPDDAYIIDFAEDAGMELPYSCRGGACFTCAGQMVSGSVDQSDGSFLDDKQMEKGFVLTCVAYPTSDCGIYPPKEFELY 416 MA Y VKLI P+GE + + DD YI+D AE+AG++LPYSCR GAC TCAG++ +GSVDQSD SFLDD Q+E G+VLTCVAYPTSDC I KE +LY Sbjct: 1 MASYTVKLITPDGESS-IECSDDTYILDAAEEAGLDLPYSCRAGACSTCAGKITAGSVDQSDQSFLDDDQIEAGYVLTCVAYPTSDCTIETHKEEDLY 97
BLAST of CF832837 vs. ExPASy Swiss-Prot
Match: FER1_APHFL (Ferredoxin-1 OS=Aphanizomenon flos-aquae PE=1 SV=2) HSP 1 Score: 132.88 bits (333), Expect = 1.411e-30 Identity = 62/98 (63.27%), Postives = 74/98 (75.51%), Query Frame = -2 Query: 123 MAVYKVKLIGPNGEENEFDAPDDAYIIDFAEDAGMELPYSCRGGACFTCAGQMVSGSVDQSDGSFLDDKQMEKGFVLTCVAYPTSDCGIYPPKEFELY 416 MA YKV LI G D PDD YI+D AE+AG++LPYSCR GAC TCAG++V+G++DQSD SFLDD Q+E G+VLTCVAYPTSD I KE +LY Sbjct: 1 MATYKVTLIDAEGTTTTIDCPDDTYILDAAEEAGLDLPYSCRAGACSTCAGKLVTGTIDQSDQSFLDDDQVEAGYVLTCVAYPTSDVTIETHKEEDLY 98
BLAST of CF832837 vs. ExPASy Swiss-Prot
Match: FER_SYNLI (Ferredoxin OS=Synechococcus lividus PE=1 SV=2) HSP 1 Score: 132.109 bits (331), Expect = 2.407e-30 Identity = 62/98 (63.27%), Postives = 75/98 (76.53%), Query Frame = -2 Query: 123 MAVYKVKLIGPNGEENEFDAPDDAYIIDFAEDAGMELPYSCRGGACFTCAGQMVSGSVDQSDGSFLDDKQMEKGFVLTCVAYPTSDCGIYPPKEFELY 416 MA YKV L+ P+GE D P+D YI+D AE+ G++LP+SCR GAC TCAG+++ G VDQSD SFLDD Q+EKGFVLTCVAYP SDC I +E ELY Sbjct: 1 MATYKVTLVRPDGETT-IDVPEDEYILDVAEEQGLDLPFSCRAGACSTCAGKLLEGEVDQSDQSFLDDDQIEKGFVLTCVAYPRSDCKILTHQEEELY 97
BLAST of CF832837 vs. ExPASy Swiss-Prot
Match: FER_MASLA (Ferredoxin OS=Mastigocladus laminosus GN=petF PE=1 SV=2) HSP 1 Score: 131.724 bits (330), Expect = 3.143e-30 Identity = 64/99 (64.65%), Postives = 75/99 (75.76%), Query Frame = -2 Query: 123 MAVYKVKLIGP-NGEENEFDAPDDAYIIDFAEDAGMELPYSCRGGACFTCAGQMVSGSVDQSDGSFLDDKQMEKGFVLTCVAYPTSDCGIYPPKEFELY 416 MA YKV LI G + PDD YI+D AE+AG++LPYSCR GAC TCAG+++SG+VDQSD SFLDD Q+E G+VLTCVAYPTSDC I KE ELY Sbjct: 1 MATYKVTLINEAEGLNKTIEVPDDQYILDAAEEAGIDLPYSCRAGACSTCAGKLISGTVDQSDQSFLDDDQIEAGYVLTCVAYPTSDCVIETHKEEELY 99
BLAST of CF832837 vs. ExPASy Swiss-Prot
Match: FER1_MESCR (Ferredoxin-1, chloroplastic OS=Mesembryanthemum crystallinum PE=2 SV=1) HSP 1 Score: 131.724 bits (330), Expect = 3.143e-30 Identity = 71/144 (49.31%), Postives = 95/144 (65.97%), Query Frame = -2 Query: 126 TSCLFQAAPRSKKFFLVKSPASLGSTRSVFKA-FGLKCFSFKA--SAMAVYKVKLIGPNGEENEFDAPDDAYIIDFAEDAGMELPYSCRGGACFTCAGQMVSGSVDQSDGSFLDDKQMEKGFVLTCVAYPTSDCGIYPPKEFEL 548 T+ A S F P + +V +A FGLK + + +AMA YKV L+ P G++ E + PDD YI+D AE+AG++LPYSCR G+C +CAG++ SGSV+Q DGSFLDD Q+++G+VLTCVAYPT D I KE EL Sbjct: 4 TTAALSGATMSTAFAPKTPPMTAALPTNVGRALFGLKSSASRGRVTAMAAYKVTLVTPEGKQ-ELECPDDVYILDAAEEAGIDLPYSCRAGSCSSCAGKVTSGSVNQDDGSFLDDDQIKEGWVLTCVAYPTGDVTIETHKEEEL 146
BLAST of CF832837 vs. ExPASy Swiss-Prot
Match: FERA_ALOMA (Ferredoxin-A OS=Alocasia macrorrhiza PE=1 SV=1) HSP 1 Score: 131.339 bits (329), Expect = 4.105e-30 Identity = 62/96 (64.58%), Postives = 77/96 (80.21%), Query Frame = -2 Query: 126 AVYKVKLIGPNGEENEFDAPDDAYIIDFAEDAGMELPYSCRGGACFTCAGQMVSGSVDQSDGSFLDDKQMEKGFVLTCVAYPTSDCGIYPPKEFEL 413 A YKVKL+ P G++ EFD PDD YI+D AE+ G++LPYSCR G+C +CAG++ G VDQSDGSFLDD+QME+G+VLTCVA+PTSD I KE EL Sbjct: 1 ATYKVKLVTPQGQQ-EFDCPDDVYILDQAEEEGIDLPYSCRAGSCSSCAGKVKQGEVDQSDGSFLDDEQMEQGWVLTCVAFPTSDVVIETHKEEEL 95
BLAST of CF832837 vs. ExPASy Swiss-Prot
Match: FER_CAPAN (Ferredoxin, chloroplastic OS=Capsicum annuum GN=AP1 PE=1 SV=1) HSP 1 Score: 130.954 bits (328), Expect = 5.362e-30 Identity = 73/131 (55.73%), Postives = 94/131 (71.76%), Query Frame = -2 Query: 126 FLVKSPA--SLGSTRSVFKA-FGLKCFSF-KASAMAVYKVKLIGPNGEENEFDAPDDAYIIDFAEDAGMELPYSCRGGACFTCAGQMVSGSVDQSDGSFLDDKQMEKGFVLTCVAYPTSDCGIYPPKEFEL 506 F+ + PA SL +V +A FGLK + K + MA YKVKLI P+G EFD PD+ YI+D AE+AG +LPYSCR G+C +CAG++ G+VDQ+DG+FLDD Q+E+G+VLTCVAYP SD I KE EL Sbjct: 13 FMPRKPAVTSLKPIPNVGEALFGLKSANGGKVTCMASYKVKLITPDGPI-EFDCPDNVYILDQAEEAGHDLPYSCRAGSCSSCAGKIAGGAVDQTDGNFLDDDQLEEGWVLTCVAYPQSDVTIETHKEAEL 142
BLAST of CF832837 vs. ExPASy Swiss-Prot
Match: FER2_ARATH (Ferredoxin-2, chloroplastic OS=Arabidopsis thaliana GN=FD2 PE=1 SV=1) HSP 1 Score: 130.954 bits (328), Expect = 5.362e-30 Identity = 73/135 (54.07%), Postives = 95/135 (70.37%), Query Frame = -2 Query: 126 FLVKSPASLGSTRSVFKA-----FGLKCFSFKA---SAMAVYKVKLIGPNGEENEFDAPDDAYIIDFAEDAGMELPYSCRGGACFTCAGQMVSGSVDQSDGSFLDDKQMEKGFVLTCVAYPTSDCGIYPPKEFEL 506 F+ +SPA + S RS+ A FGLK + + +AMA YKVK I P GE E + DD Y++D AE+AG++LPYSCR G+C +CAG++VSGSVDQSD SFLDD+Q+ +GFVLTC AYPTSD I KE ++ Sbjct: 15 FIRRSPAPI-SLRSLPSANTQSLFGLKSGTARGGRVTAMATYKVKFITPEGEL-EVECDDDVYVLDAAEEAGIDLPYSCRAGSCSSCAGKVVSGSVDQSDQSFLDDEQIGEGFVLTCAAYPTSDVTIETHKEEDI 147
BLAST of CF832837 vs. ExPASy Swiss-Prot
Match: FER1_ARATH (Ferredoxin-1, chloroplastic OS=Arabidopsis thaliana GN=FD1 PE=1 SV=1) HSP 1 Score: 130.954 bits (328), Expect = 5.362e-30 Identity = 67/126 (53.17%), Postives = 89/126 (70.63%), Query Frame = -2 Query: 135 KSPASLGS-----TRSVFKAFGLKCFSFKASAMAVYKVKLIGPNGEENEFDAPDDAYIIDFAEDAGMELPYSCRGGACFTCAGQMVSGSVDQSDGSFLDDKQMEKGFVLTCVAYPTSDCGIYPPKE 497 ++P SL S T+S+F + +AMA YKVK I P GE+ E + +D Y++D AE+AG++LPYSCR G+C +CAG++VSGS+DQSD SFLDD+QM +G+VLTCVAYPTSD I KE Sbjct: 20 QTPISLRSLPFANTQSLFGLKSSTARGGRVTAMATYKVKFITPEGEQ-EVECEEDVYVLDAAEEAGLDLPYSCRAGSCSSCAGKVVSGSIDQSDQSFLDDEQMSEGYVLTCVAYPTSDVVIETHKE 144 The following BLAST results are available for this feature:
BLAST of CF832837 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 109
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Sequences
The
following sequences are available for this feature:
EST sequence >CF832837 ID=CF832837; Name=CF832837; organism=Citrus sinensis; type=EST; length=648bpback to top |