CF832837
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF832837 vs. ExPASy Swiss-Prot
Match: FERB_ALOMA (Ferredoxin-B OS=Alocasia macrorrhiza PE=1 SV=1) HSP 1 Score: 129.798 bits (325), Expect = 1.194e-29 Identity = 60/96 (62.50%), Postives = 77/96 (80.21%), Query Frame = -2 Query: 126 AVYKVKLIGPNGEENEFDAPDDAYIIDFAEDAGMELPYSCRGGACFTCAGQMVSGSVDQSDGSFLDDKQMEKGFVLTCVAYPTSDCGIYPPKEFEL 413 A YKVKL+ P+G+ EF+ PDD YI+D AE+ G++LPYSCR G+C +CAG++ +G+VDQSDGSFLDD Q+ +G+VLTCVAYPTSD I KE EL Sbjct: 1 ATYKVKLVTPSGQPLEFECPDDVYILDQAEEEGIDLPYSCRAGSCSSCAGKVKNGNVDQSDGSFLDDDQIGEGWVLTCVAYPTSDVVIETHKEEEL 96
BLAST of CF832837 vs. ExPASy Swiss-Prot
Match: FER_GUITH (Ferredoxin OS=Guillardia theta GN=petF PE=3 SV=3) HSP 1 Score: 129.028 bits (323), Expect = 2.037e-29 Identity = 63/98 (64.29%), Postives = 73/98 (74.49%), Query Frame = -2 Query: 123 MAVYKVKLIGPNGEENEFDAPDDAYIIDFAEDAGMELPYSCRGGACFTCAGQMVSGSVDQSDGSFLDDKQMEKGFVLTCVAYPTSDCGIYPPKEFELY 416 MA YKVKL G G + D PDD YI+D AE+ G++LPYSCR GAC TCAG++ +GSVDQSD SFLDD Q+ GFVLTCVAYPTSDC I +E LY Sbjct: 1 MATYKVKLSG-EGVDKTIDCPDDQYILDAAEEQGIDLPYSCRAGACSTCAGKVAAGSVDQSDQSFLDDSQIGDGFVLTCVAYPTSDCTILTHQEEGLY 97
BLAST of CF832837 vs. ExPASy Swiss-Prot
Match: FER1_SYNP2 (Ferredoxin-1 OS=Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) GN=petF PE=3 SV=2) HSP 1 Score: 128.642 bits (322), Expect = 2.661e-29 Identity = 64/98 (65.31%), Postives = 76/98 (77.55%), Query Frame = -2 Query: 123 MAVYKVKLIGPNGEENEFDAPDDAYIIDFAEDAGMELPYSCRGGACFTCAGQMVSGSVDQSDGSFLDDKQMEKGFVLTCVAYPTSDCGIYPPKEFELY 416 MA YKV LI P+GE + +DAPDD YI+D A DAG +LP SCR GAC TCAG++VSG+VDQS+ SFLDD Q+E G+VLTC+AYP SD I KE ELY Sbjct: 1 MATYKVTLITPDGEVS-YDAPDDEYILDSAGDAGYDLPASCRAGACSTCAGKIVSGTVDQSEQSFLDDDQIEAGYVLTCIAYPQSDVTIETNKEEELY 97
BLAST of CF832837 vs. ExPASy Swiss-Prot
Match: FER_SCEQU (Ferredoxin OS=Scenedesmus quadricauda PE=1 SV=1) HSP 1 Score: 127.872 bits (320), Expect = 4.539e-29 Identity = 60/97 (61.86%), Postives = 76/97 (78.35%), Query Frame = -2 Query: 123 AVYKVKLIGPNGEENEFDAPDDAYIIDFAEDAGMELPYSCRGGACFTCAGQMVSGSVDQSDGSFLDDKQMEKGFVLTCVAYPTSDCGIYPPKEFELY 413 A YKV L P+G++ + PDD YI+D AE+AG++LPYSCR GAC +CAG++ +G+VDQSD SFLDD QM+ GFVLTCVAYPTSDC I KE +L+ Sbjct: 1 ATYKVTLKTPSGDQT-IECPDDTYILDAAEEAGLDLPYSCRAGACSSCAGKVEAGTVDQSDQSFLDDSQMDGGFVLTCVAYPTSDCTIATHKEEDLF 96
BLAST of CF832837 vs. ExPASy Swiss-Prot
Match: FER_WHEAT (Ferredoxin, chloroplastic OS=Triticum aestivum GN=PETF PE=1 SV=2) HSP 1 Score: 127.487 bits (319), Expect = 5.928e-29 Identity = 72/146 (49.32%), Postives = 92/146 (63.01%), Query Frame = -2 Query: 126 TVRLPTSCLFQAAPRSKKFFLVKSPASLGSTRSVFKAFGLKCFSFKASAMAVYKVKLIGPNGEENEFDAPDDAYIIDFAEDAGMELPYSCRGGACFTCAGQMVSGSVDQSDGSFLDDKQMEKGFVLTCVAYPTSDCGIYPPKEFEL 563 ++R P S L AP + + L + SL + + V A + A A YKVKL+ P GE E + PDD YI+D AE+ G++LPYSCR G+C +CAG++VSG +DQSD SFLDD QME G+VLTC AYP SD I KE EL Sbjct: 6 SLRAPFS-LRAVAPPAPRVALAPAALSLAAAKQVRGA--------RLRAQATYKVKLVTPEGEV-ELEVPDDVYILDQAEEEGIDLPYSCRAGSCSSCAGKLVSGEIDQSDQSFLDDDQMEAGWVLTCHAYPKSDIVIETHKEEEL 141
BLAST of CF832837 vs. ExPASy Swiss-Prot
Match: FER_CHLFR (Ferredoxin OS=Chlorogloeopsis fritschii PE=1 SV=2) HSP 1 Score: 127.487 bits (319), Expect = 5.928e-29 Identity = 63/99 (63.64%), Postives = 73/99 (73.74%), Query Frame = -2 Query: 123 MAVYKVKLIGP-NGEENEFDAPDDAYIIDFAEDAGMELPYSCRGGACFTCAGQMVSGSVDQSDGSFLDDKQMEKGFVLTCVAYPTSDCGIYPPKEFELY 416 MA YKV LI G + DD YI+D AE+AG++LPYSCR GAC TCAG++ SG+VDQSD SFLDD Q+E G+VLTCVAYPTSDC I KE ELY Sbjct: 1 MATYKVTLINDAEGLNQTIEVDDDTYILDAAEEAGLDLPYSCRAGACSTCAGKIKSGTVDQSDQSFLDDDQIEAGYVLTCVAYPTSDCTIETHKEEELY 99
BLAST of CF832837 vs. ExPASy Swiss-Prot
Match: FER_SILPR (Ferredoxin, chloroplastic OS=Silene pratensis GN=PETF PE=2 SV=1) HSP 1 Score: 127.102 bits (318), Expect = 7.742e-29 Identity = 70/149 (46.98%), Postives = 93/149 (62.42%), Query Frame = -2 Query: 126 MSTVRLPTSCLFQAAPRSKKFFLVKSPASLGSTRSVFKAFGLKCFSF-KASAMAVYKVKLIGPNGEENEFDAPDDAYIIDFAEDAGMELPYSCRGGACFTCAGQMVSGSVDQSDGSFLDDKQMEKGFVLTCVAYPTSDCGIYPPKEFEL 569 +ST+ + S L P+ + P ++G FGLK S + +AMA YKV LI FD PDD Y++D AE+ G++LPYSCR G+C +CAG++V+GSVDQSD SFLDD Q+E G+VLTC AYP++D I KE EL Sbjct: 5 LSTLSVSASLL----PKQQPMVASSLPTNMGQA-----LFGLKAGSRGRVTAMATYKVTLITKESGTVTFDCPDDVYVLDQAEEEGIDLPYSCRAGSCSSCAGKVVAGSVDQSDQSFLDDDQIEAGWVLTCAAYPSADVTIETHKEEEL 144
BLAST of CF832837 vs. ExPASy Swiss-Prot
Match: FER_DATAR (Ferredoxin OS=Datura arborea PE=1 SV=1) HSP 1 Score: 127.102 bits (318), Expect = 7.742e-29 Identity = 62/96 (64.58%), Postives = 73/96 (76.04%), Query Frame = -2 Query: 126 AVYKVKLIGPNGEENEFDAPDDAYIIDFAEDAGMELPYSCRGGACFTCAGQMVSGSVDQSDGSFLDDKQMEKGFVLTCVAYPTSDCGIYPPKEFEL 413 A YKVKL+ P+G EFD PDD YI+D AE+ G ELPYSCR G+C +CAG++ +G+VDQSDG+FLDD QM GFVLTCVAYP SD I KE EL Sbjct: 1 ATYKVKLVTPDGPV-EFDCPDDVYILDQAEEEGHELPYSCRAGSCSSCAGKVTAGTVDQSDGNFLDDDQMADGFVLTCVAYPQSDVTIETHKEEEL 95
BLAST of CF832837 vs. ExPASy Swiss-Prot
Match: FER_SPIMA (Ferredoxin OS=Spirulina maxima PE=1 SV=2) HSP 1 Score: 126.716 bits (317), Expect = 1.011e-28 Identity = 63/99 (63.64%), Postives = 73/99 (73.74%), Query Frame = -2 Query: 123 MAVYKVKLIGPNGEENE-FDAPDDAYIIDFAEDAGMELPYSCRGGACFTCAGQMVSGSVDQSDGSFLDDKQMEKGFVLTCVAYPTSDCGIYPPKEFELY 416 MA YKV LI NE D DD YI+D AE+AG++LPYSCR GAC TCAG++ SGS+DQSD SFLDD Q+E G+VLTCVAYPTSDC I +E LY Sbjct: 1 MATYKVTLISEAEGINETIDCDDDTYILDAAEEAGLDLPYSCRAGACSTCAGKITSGSIDQSDQSFLDDDQIEAGYVLTCVAYPTSDCTIQTHQEEGLY 99
BLAST of CF832837 vs. ExPASy Swiss-Prot
Match: FER_SAMNI (Ferredoxin OS=Sambucus nigra PE=1 SV=1) HSP 1 Score: 126.716 bits (317), Expect = 1.011e-28 Identity = 60/96 (62.50%), Postives = 78/96 (81.25%), Query Frame = -2 Query: 126 AVYKVKLIGPNGEENEFDAPDDAYIIDFAEDAGMELPYSCRGGACFTCAGQMVSGSVDQSDGSFLDDKQMEKGFVLTCVAYPTSDCGIYPPKEFEL 413 A YKVKLI P+G + EF+ PDD YI++ AE+ G+++PYSCR G+C +CAG++V+GSVDQSD SFLDD+Q+E+G+VLTCVAYP SD I KE EL Sbjct: 1 ASYKVKLITPDGPQ-EFECPDDVYILEHAEELGIDIPYSCRAGSCSSCAGKLVAGSVDQSDQSFLDDEQIEEGWVLTCVAYPKSDVTIETHKEEEL 95 The following BLAST results are available for this feature:
BLAST of CF832837 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 109
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Sequences
The
following sequences are available for this feature:
EST sequence >CF832837 ID=CF832837; Name=CF832837; organism=Citrus sinensis; type=EST; length=648bpback to top |