CF832837
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF832837 vs. ExPASy Swiss-Prot
Match: FER_CHLRE (Ferredoxin, chloroplastic OS=Chlamydomonas reinhardtii GN=PETF PE=1 SV=2) HSP 1 Score: 122.479 bits (306), Expect = 1.907e-27 Identity = 61/102 (59.80%), Postives = 76/102 (74.51%), Query Frame = -2 Query: 123 KASAMAVYKVKLIGPNGEENEFDAPDDAYIIDFAEDAGMELPYSCRGGACFTCAGQMVSGSVDQSDGSFLDDKQMEKGFVLTCVAYPTSDCGIYPPKEFELY 428 + S MA YKV L P+G++ + P D YI+D AE+AG++LPYSCR GAC +CAG++ +G+VDQSD SFLDD QM GFVLTCVAYPTSDC I +E LY Sbjct: 27 RMSCMA-YKVTLKTPSGDKT-IECPADTYILDAAEEAGLDLPYSCRAGACSSCAGKVAAGTVDQSDQSFLDDAQMGNGFVLTCVAYPTSDCTIQTHQEEALY 126
BLAST of CF832837 vs. ExPASy Swiss-Prot
Match: FER1_SYNP6 (Ferredoxin-1 OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=petF1 PE=1 SV=2) HSP 1 Score: 122.479 bits (306), Expect = 1.907e-27 Identity = 61/99 (61.62%), Postives = 71/99 (71.72%), Query Frame = -2 Query: 123 MAVYKVKLIGP-NGEENEFDAPDDAYIIDFAEDAGMELPYSCRGGACFTCAGQMVSGSVDQSDGSFLDDKQMEKGFVLTCVAYPTSDCGIYPPKEFELY 416 MA YKV L+ G D DD YI+D AE+ G++LPYSCR GAC TCAG++VSG+VDQSD SFLDD Q+ GFVLTCVAYPTSD I KE +LY Sbjct: 1 MATYKVTLVNAAEGLNTTIDVADDTYILDAAEEQGIDLPYSCRAGACSTCAGKVVSGTVDQSDQSFLDDDQIAAGFVLTCVAYPTSDVTIETHKEEDLY 99
BLAST of CF832837 vs. ExPASy Swiss-Prot
Match: FER1_SYNE7 (Ferredoxin-1 OS=Synechococcus elongatus (strain PCC 7942) GN=petF PE=3 SV=2) HSP 1 Score: 122.479 bits (306), Expect = 1.907e-27 Identity = 61/99 (61.62%), Postives = 71/99 (71.72%), Query Frame = -2 Query: 123 MAVYKVKLIGP-NGEENEFDAPDDAYIIDFAEDAGMELPYSCRGGACFTCAGQMVSGSVDQSDGSFLDDKQMEKGFVLTCVAYPTSDCGIYPPKEFELY 416 MA YKV L+ G D DD YI+D AE+ G++LPYSCR GAC TCAG++VSG+VDQSD SFLDD Q+ GFVLTCVAYPTSD I KE +LY Sbjct: 1 MATYKVTLVNAAEGLNTTIDVADDTYILDAAEEQGIDLPYSCRAGACSTCAGKVVSGTVDQSDQSFLDDDQIAAGFVLTCVAYPTSDVTIETHKEEDLY 99
BLAST of CF832837 vs. ExPASy Swiss-Prot
Match: FER1_HYONI (Ferredoxin-1 OS=Hyoscyamus niger PE=1 SV=1) HSP 1 Score: 121.709 bits (304), Expect = 3.253e-27 Identity = 59/96 (61.46%), Postives = 73/96 (76.04%), Query Frame = -2 Query: 126 AVYKVKLIGPNGEENEFDAPDDAYIIDFAEDAGMELPYSCRGGACFTCAGQMVSGSVDQSDGSFLDDKQMEKGFVLTCVAYPTSDCGIYPPKEFEL 413 A YKVKL+ P+G EF+ PDD YI+D AE+ G ELPYSCR G+C +CAG++ +G+VDQSDG+FLDD Q+ GFVLTCVAYP SD I KE +L Sbjct: 1 ATYKVKLVTPDGPV-EFNCPDDVYILDQAEEEGHELPYSCRAGSCSSCAGKVSAGTVDQSDGNFLDDDQIADGFVLTCVAYPQSDVTIETHKEEDL 95
BLAST of CF832837 vs. ExPASy Swiss-Prot
Match: FER_LEUGL (Ferredoxin OS=Leucaena glauca PE=1 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 5.548e-27 Identity = 57/94 (60.64%), Postives = 74/94 (78.72%), Query Frame = -2 Query: 126 YKVKLIGPNGEENEFDAPDDAYIIDFAEDAGMELPYSCRGGACFTCAGQMVSGSVDQSDGSFLDDKQMEKGFVLTCVAYPTSDCGIYPPKEFEL 407 +KVKL+ P+G + EF+ PDD YI+D AE+ G+ELPYSCR G+C +CAG++V G +DQSD SFLDD+Q+E+G+VLTC AYP SD I KE EL Sbjct: 2 FKVKLLTPDGPK-EFECPDDVYILDQAEELGIELPYSCRAGSCSSCAGKLVEGDLDQSDQSFLDDEQIEEGWVLTCAAYPRSDVVIETHKEEEL 94
BLAST of CF832837 vs. ExPASy Swiss-Prot
Match: FER_MEDSA (Ferredoxin OS=Medicago sativa PE=1 SV=1) HSP 1 Score: 120.553 bits (301), Expect = 7.246e-27 Identity = 58/96 (60.42%), Postives = 73/96 (76.04%), Query Frame = -2 Query: 126 AVYKVKLIGPNGEENEFDAPDDAYIIDFAEDAGMELPYSCRGGACFTCAGQMVSGSVDQSDGSFLDDKQMEKGFVLTCVAYPTSDCGIYPPKEFEL 413 A YKVKL+ P G + EF+ PDD YI+D AE+ G+ LPYSCR G+C +CAG++ +G V+QSDGSFLDD Q+E+G+VLTCVAY SD I KE EL Sbjct: 1 ASYKVKLVTPEGTQ-EFECPDDVYILDHAEEEGIVLPYSCRAGSCSSCAGKVAAGEVNQSDGSFLDDDQIEEGWVLTCVAYAKSDVTIETHKEEEL 95
BLAST of CF832837 vs. ExPASy Swiss-Prot
Match: FER_SOLLY (Ferredoxin OS=Solanum lyratum PE=1 SV=1) HSP 1 Score: 120.168 bits (300), Expect = 9.464e-27 Identity = 59/96 (61.46%), Postives = 72/96 (75.00%), Query Frame = -2 Query: 126 AVYKVKLIGPNGEENEFDAPDDAYIIDFAEDAGMELPYSCRGGACFTCAGQMVSGSVDQSDGSFLDDKQMEKGFVLTCVAYPTSDCGIYPPKEFEL 413 A YKVKLI P G EF+ PDD YI+D AE+ G +LPYSCR GAC +CAG++ +G+VDQSD SFLDD Q+ +GFVLTCVAYP S+ I KE +L Sbjct: 1 ATYKVKLITPEGPV-EFNCPDDVYILDSAEENGHDLPYSCRAGACSSCAGKITAGNVDQSDNSFLDDDQVAEGFVLTCVAYPKSNVTIETHKEDDL 95
BLAST of CF832837 vs. ExPASy Swiss-Prot
Match: FER_PORUM (Ferredoxin OS=Porphyra umbilicalis GN=PETF PE=1 SV=1) HSP 1 Score: 120.168 bits (300), Expect = 9.464e-27 Identity = 58/98 (59.18%), Postives = 71/98 (72.45%), Query Frame = -2 Query: 123 AVYKVKLIGPN-GEENEFDAPDDAYIIDFAEDAGMELPYSCRGGACFTCAGQMVSGSVDQSDGSFLDDKQMEKGFVLTCVAYPTSDCGIYPPKEFELY 413 A YK+ L+ G + FD +D YI+D AE+ G+ELPYSCR GAC TCAG++ G+VDQSD SFLDD+QM KG+VLTC+AYP SDC I E ELY Sbjct: 1 ADYKIHLVSKEEGIDVTFDCSEDTYILDAAEEEGIELPYSCRAGACSTCAGKVTEGTVDQSDQSFLDDEQMLKGYVLTCIAYPESDCTILTHVEQELY 98
BLAST of CF832837 vs. ExPASy Swiss-Prot
Match: FER_PHYAF (Ferredoxin OS=Physalis alkekengi var. francheti PE=1 SV=1) HSP 1 Score: 120.168 bits (300), Expect = 9.464e-27 Identity = 59/96 (61.46%), Postives = 72/96 (75.00%), Query Frame = -2 Query: 126 AVYKVKLIGPNGEENEFDAPDDAYIIDFAEDAGMELPYSCRGGACFTCAGQMVSGSVDQSDGSFLDDKQMEKGFVLTCVAYPTSDCGIYPPKEFEL 413 A YKVKLI P+G FD PD+ YI+D AE+ G +LPYSCR G+C +CAG++ +G+VDQSDG+FLDD Q+ GFVLTCVAYP SD I KE EL Sbjct: 1 ATYKVKLITPDGPV-VFDCPDNEYILDAAEEQGHDLPYSCRAGSCSSCAGKVTAGTVDQSDGNFLDDDQVADGFVLTCVAYPQSDVTIETHKEEEL 95
BLAST of CF832837 vs. ExPASy Swiss-Prot
Match: FER4_ARATH (Probable ferredoxin-4, chloroplastic OS=Arabidopsis thaliana GN=FD4 PE=3 SV=1) HSP 1 Score: 120.168 bits (300), Expect = 9.464e-27 Identity = 54/101 (53.47%), Postives = 73/101 (72.28%), Query Frame = -2 Query: 126 KASAMAVYKVKLIGPNGEENEFDAPDDAYIIDFAEDAGMELPYSCRGGACFTCAGQMVSGSVDQSDGSFLDDKQMEKGFVLTCVAYPTSDCGIYPPKEFEL 428 K A KVKLI P GEE E + +D I++ AE+AG+ELPYSCR G C TC G++VSG VDQS GSFL+++Q++KG++LTC+A P DC +Y K+ +L Sbjct: 47 KVFAKESRKVKLISPEGEEQEIEGNEDCCILESAENAGLELPYSCRSGTCGTCCGKLVSGKVDQSLGSFLEEEQIQKGYILTCIALPLEDCVVYTHKQSDL 147 The following BLAST results are available for this feature:
BLAST of CF832837 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 109
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Sequences
The
following sequences are available for this feature:
EST sequence >CF832837 ID=CF832837; Name=CF832837; organism=Citrus sinensis; type=EST; length=648bpback to top |