CF832837
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF832837 vs. ExPASy Swiss-Prot
Match: FER1_MAIZE (Ferredoxin-1, chloroplastic OS=Zea mays GN=FDX1 PE=1 SV=1) HSP 1 Score: 120.168 bits (300), Expect = 9.464e-27 Identity = 61/98 (62.24%), Postives = 72/98 (73.47%), Query Frame = -2 Query: 126 AMAVYKVKLIGPNGEENEFDAPDDAYIIDFAEDAGMELPYSCRGGACFTCAGQMVSGSVDQSDGSFLDDKQMEKGFVLTCVAYPTSDCGIYPPKEFEL 419 A A Y VKLI P GE E PDD YI+D AE+ G++LPYSCR G+C +CAG++VSGSVDQSD S+LDD Q+ G+VLTC AYPTSD I KE EL Sbjct: 51 AQATYNVKLITPEGEV-ELQVPDDVYILDQAEEDGIDLPYSCRAGSCSSCAGKVVSGSVDQSDQSYLDDGQIADGWVLTCHAYPTSDVVIETHKEEEL 147
BLAST of CF832837 vs. ExPASy Swiss-Prot
Match: FER1_PLEBO (Ferredoxin-1 OS=Plectonema boryanum GN=petF1 PE=3 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 1.236e-26 Identity = 57/99 (57.58%), Postives = 72/99 (72.73%), Query Frame = -2 Query: 123 MAVYKVKLIGPN-GEENEFDAPDDAYIIDFAEDAGMELPYSCRGGACFTCAGQMVSGSVDQSDGSFLDDKQMEKGFVLTCVAYPTSDCGIYPPKEFELY 416 M +KV LI G + PDD YI+D AE+ G++LPYSCR GAC TCAG++ +G+VDQSD SFLDD Q++ G+VLTCVAYPTSDC I +E +LY Sbjct: 1 MPSFKVTLINETEGLNTTIEVPDDEYILDAAEEQGIDLPYSCRAGACSTCAGKITAGTVDQSDQSFLDDDQIQAGYVLTCVAYPTSDCTILTHQEEDLY 99
BLAST of CF832837 vs. ExPASy Swiss-Prot
Match: FER2_SPIOL (Ferredoxin-2 OS=Spinacia oleracea PE=1 SV=1) HSP 1 Score: 119.398 bits (298), Expect = 1.614e-26 Identity = 58/96 (60.42%), Postives = 72/96 (75.00%), Query Frame = -2 Query: 126 AVYKVKLIGPNGEENEFDAPDDAYIIDFAEDAGMELPYSCRGGACFTCAGQMVSGSVDQSDGSFLDDKQMEKGFVLTCVAYPTSDCGIYPPKEFEL 413 A YKV L+ P+G + + DD YI+D AE+ GM+LPYSCR GAC +CAG++ SGSVDQSD SFL+D QME+G+VLTC+AYPT D I KE EL Sbjct: 1 ATYKVTLVTPSGSQ-VIECGDDEYILDAAEEKGMDLPYSCRAGACSSCAGKVTSGSVDQSDQSFLEDGQMEEGWVLTCIAYPTGDVTIETHKEEEL 95
BLAST of CF832837 vs. ExPASy Swiss-Prot
Match: FER1_ORYSJ (Ferredoxin-1, chloroplastic OS=Oryza sativa subsp. japonica GN=ADI1 PE=1 SV=1) HSP 1 Score: 119.398 bits (298), Expect = 1.614e-26 Identity = 67/147 (45.58%), Postives = 85/147 (57.82%), Query Frame = -2 Query: 126 STVRLPTSCLFQAAPRSKKFFLVKSPASLGSTRSVFKAFGLKCFSFKASAMAVYKVKLIGPNGEENEFDAPDDAYIIDFAEDAGMELPYSCRGGACFTCAGQMVSGSVDQSDGSFLDDKQMEKGFVLTCVAYPTSDCGIYPPKEFEL 566 S VRLP S AP + ++ + LG + A Y VKLI P+GE E PDD YI+D AE+ G++LPYSCR G+C +CAG++VSG +DQSD SFLDD Q+ G+VLTC AYP SD I KE +L Sbjct: 8 SQVRLPMSLRVATAPAPARVSVLPASNKLGD---------------RLRMQATYNVKLITPDGEV-ELQVPDDVYILDQAEEEGIDLPYSCRAGSCSSCAGKVVSGEIDQSDQSFLDDDQVAAGWVLTCHAYPKSDVVIETHKEDDL 138
BLAST of CF832837 vs. ExPASy Swiss-Prot
Match: FER1_ORYSI (Ferredoxin-1, chloroplastic OS=Oryza sativa subsp. indica GN=ADI1 PE=1 SV=1) HSP 1 Score: 119.398 bits (298), Expect = 1.614e-26 Identity = 67/147 (45.58%), Postives = 85/147 (57.82%), Query Frame = -2 Query: 126 STVRLPTSCLFQAAPRSKKFFLVKSPASLGSTRSVFKAFGLKCFSFKASAMAVYKVKLIGPNGEENEFDAPDDAYIIDFAEDAGMELPYSCRGGACFTCAGQMVSGSVDQSDGSFLDDKQMEKGFVLTCVAYPTSDCGIYPPKEFEL 566 S VRLP S AP + ++ + LG + A Y VKLI P+GE E PDD YI+D AE+ G++LPYSCR G+C +CAG++VSG +DQSD SFLDD Q+ G+VLTC AYP SD I KE +L Sbjct: 8 SQVRLPMSLRVATAPAPARVSVLPASNKLGD---------------RLRMQATYNVKLITPDGEV-ELQVPDDVYILDQAEEEGIDLPYSCRAGSCSSCAGKVVSGEIDQSDQSFLDDDQVAAGWVLTCHAYPKSDVVIETHKEDDL 138
BLAST of CF832837 vs. ExPASy Swiss-Prot
Match: FER_SOLLS (Ferredoxin OS=Solanum lasiocarpum PE=1 SV=1) HSP 1 Score: 119.013 bits (297), Expect = 2.108e-26 Identity = 60/93 (64.52%), Postives = 70/93 (75.27%), Query Frame = -2 Query: 135 AVYKVKLIGPNGEENEFDAPDDAYIIDFAEDAGMELPYSCRGGACFTCAGQMVSGSVDQSDGSFLDDKQMEKGFVLTCVAYPTSDCGIYPPKE 413 A YKVKLI P+G EF+ PDD YI+D AE+ G +LPYSCR GAC +CAG++V GSVDQSD SFLDD Q+ GFVLTCVAYP S+ I KE Sbjct: 1 ASYKVKLITPDGPI-EFNCPDDVYILDRAEEEGHDLPYSCRAGACSSCAGKIVDGSVDQSDNSFLDDDQIGGGFVLTCVAYPKSNVTIETHKE 92
BLAST of CF832837 vs. ExPASy Swiss-Prot
Match: FER_APHSA (Ferredoxin-1 OS=Aphanothece sacrum PE=1 SV=2) HSP 1 Score: 119.013 bits (297), Expect = 2.108e-26 Identity = 57/98 (58.16%), Postives = 69/98 (70.41%), Query Frame = -2 Query: 123 MAVYKVKLIGPNGEENEFDAPDDAYIIDFAEDAGMELPYSCRGGACFTCAGQMVSGSVDQSDGSFLDDKQMEKGFVLTCVAYPTSDCGIYPPKEFELY 416 MA YKV L P+G+ N PDD YI+D AE+ G++LPYSCR GAC TCAG++VSG D SFLDD Q++ G++LTCVAYPT DC I KE LY Sbjct: 1 MASYKVTLKTPDGD-NVITVPDDEYILDVAEEEGLDLPYSCRAGACSTCAGKLVSGPAPDEDQSFLDDDQIQAGYILTCVAYPTGDCVIETHKEEALY 97
BLAST of CF832837 vs. ExPASy Swiss-Prot
Match: FER2_CYACA (Ferredoxin OS=Cyanidium caldarium GN=PETF PE=1 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 2.754e-26 Identity = 55/97 (56.70%), Postives = 72/97 (74.23%), Query Frame = -2 Query: 123 VYKVKLIGPN-GEENEFDAPDDAYIIDFAEDAGMELPYSCRGGACFTCAGQMVSGSVDQSDGSFLDDKQMEKGFVLTCVAYPTSDCGIYPPKEFELY 410 +YK++L+ G + + P D YI+D AE+ G++LPYSCR GAC TCAG++V GSVDQSD SFLD++Q+ GF+LTCVAYPTSDC I +E LY Sbjct: 1 MYKIQLVNQKEGVDVTINCPGDQYILDAAEEQGVDLPYSCRAGACSTCAGKLVKGSVDQSDQSFLDEEQINNGFILTCVAYPTSDCVIQTHQEEALY 97
BLAST of CF832837 vs. ExPASy Swiss-Prot
Match: FER_THAWE (Ferredoxin OS=Thalassiosira weissflogii GN=petF PE=3 SV=3) HSP 1 Score: 118.242 bits (295), Expect = 3.596e-26 Identity = 56/99 (56.57%), Postives = 71/99 (71.72%), Query Frame = -2 Query: 123 MAVYKVKLIGPNGEENE-FDAPDDAYIIDFAEDAGMELPYSCRGGACFTCAGQMVSGSVDQSDGSFLDDKQMEKGFVLTCVAYPTSDCGIYPPKEFELY 416 MA YKV LI + N D DD +++D AE+AG++LPYSCR GAC TCAG++ G++DQS+ +FLDD QM GFVLTC+AYP SDC I +E ELY Sbjct: 1 MATYKVTLISEEHDINTTIDCNDDVFVLDAAEEAGIDLPYSCRAGACSTCAGKVTEGTIDQSEQTFLDDDQMGAGFVLTCIAYPKSDCTILVHQEDELY 99
BLAST of CF832837 vs. ExPASy Swiss-Prot
Match: FER1_PHYES (Ferredoxin-1 OS=Phytolacca esculenta PE=1 SV=1) HSP 1 Score: 118.242 bits (295), Expect = 3.596e-26 Identity = 54/96 (56.25%), Postives = 71/96 (73.96%), Query Frame = -2 Query: 126 AVYKVKLIGPNGEENEFDAPDDAYIIDFAEDAGMELPYSCRGGACFTCAGQMVSGSVDQSDGSFLDDKQMEKGFVLTCVAYPTSDCGIYPPKEFEL 413 A YKV L+ P+G + D PDD Y++D AE+AG++LPYSCR G+C +CAG++ +G+VDQ D SFLDD Q+E GFVLTCVAYP D I KE ++ Sbjct: 1 ATYKVTLVTPSGTQT-IDCPDDTYVLDAAEEAGLDLPYSCRAGSCSSCAGKVTAGTVDQEDQSFLDDDQIEAGFVLTCVAYPKGDVTIETHKEEDI 95 The following BLAST results are available for this feature:
BLAST of CF832837 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 109
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Sequences
The
following sequences are available for this feature:
EST sequence >CF832837 ID=CF832837; Name=CF832837; organism=Citrus sinensis; type=EST; length=648bpback to top |