CF832838
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF832838 vs. ExPASy Swiss-Prot
Match: FER_CAPAN (Ferredoxin, chloroplastic OS=Capsicum annuum GN=AP1 PE=1 SV=1) HSP 1 Score: 144.05 bits (362), Expect = 5.764e-34 Identity = 70/110 (63.64%), Postives = 89/110 (80.91%), Query Frame = 3 Query: 198 FGLKCSSF-KASAMAVYKVKLIGPNGEENEFDAPDDAYIIDSAEDAGMELPYSCRAGACSTCAGQMVSGSVDQSDGSFLDDKQMEKGFVLTCVAYPTSDCVIYTHKESEL 524 FGLK ++ K + MA YKVKLI P+G EFD PD+ YI+D AE+AG +LPYSCRAG+CS+CAG++ G+VDQ+DG+FLDD Q+E+G+VLTCVAYP SD I THKE+EL Sbjct: 34 FGLKSANGGKVTCMASYKVKLITPDGPI-EFDCPDNVYILDQAEEAGHDLPYSCRAGSCSSCAGKIAGGAVDQTDGNFLDDDQLEEGWVLTCVAYPQSDVTIETHKEAEL 142
BLAST of CF832838 vs. ExPASy Swiss-Prot
Match: FER_SYNLI (Ferredoxin OS=Synechococcus lividus PE=1 SV=2) HSP 1 Score: 142.895 bits (359), Expect = 1.284e-33 Identity = 66/98 (67.35%), Postives = 79/98 (80.61%), Query Frame = 3 Query: 234 MAVYKVKLIGPNGEENEFDAPDDAYIIDSAEDAGMELPYSCRAGACSTCAGQMVSGSVDQSDGSFLDDKQMEKGFVLTCVAYPTSDCVIYTHKESELY 527 MA YKV L+ P+GE D P+D YI+D AE+ G++LP+SCRAGACSTCAG+++ G VDQSD SFLDD Q+EKGFVLTCVAYP SDC I TH+E ELY Sbjct: 1 MATYKVTLVRPDGETT-IDVPEDEYILDVAEEQGLDLPFSCRAGACSTCAGKLLEGEVDQSDQSFLDDDQIEKGFVLTCVAYPRSDCKILTHQEEELY 97
BLAST of CF832838 vs. ExPASy Swiss-Prot
Match: FER_GUITH (Ferredoxin OS=Guillardia theta GN=petF PE=3 SV=3) HSP 1 Score: 142.124 bits (357), Expect = 2.190e-33 Identity = 67/98 (68.37%), Postives = 78/98 (79.59%), Query Frame = 3 Query: 234 MAVYKVKLIGPNGEENEFDAPDDAYIIDSAEDAGMELPYSCRAGACSTCAGQMVSGSVDQSDGSFLDDKQMEKGFVLTCVAYPTSDCVIYTHKESELY 527 MA YKVKL G G + D PDD YI+D+AE+ G++LPYSCRAGACSTCAG++ +GSVDQSD SFLDD Q+ GFVLTCVAYPTSDC I TH+E LY Sbjct: 1 MATYKVKLSG-EGVDKTIDCPDDQYILDAAEEQGIDLPYSCRAGACSTCAGKVAAGSVDQSDQSFLDDSQIGDGFVLTCVAYPTSDCTILTHQEEGLY 97
BLAST of CF832838 vs. ExPASy Swiss-Prot
Match: FER_PHYPA (Ferredoxin, chloroplastic OS=Physcomitrella patens GN=PETF PE=2 SV=1) HSP 1 Score: 141.739 bits (356), Expect = 2.861e-33 Identity = 70/119 (58.82%), Postives = 88/119 (73.95%), Query Frame = 3 Query: 174 STRSVSKAFGLKCSSF-KASAMAVYKVKLI-GPNGEENEFDAPDDAYIIDSAEDAGMELPYSCRAGACSTCAGQMVSGSVDQSDGSFLDDKQMEKGFVLTCVAYPTSDCVIYTHKESEL 524 S+ SV+KAFGLK S + + MA YKV + G G EN + D+ Y +D+AE AGM+LPYSCRAGACS+CAG + +G VDQSD SFLDD Q++ GFVLTCVAYP SDC+I TH+E + Sbjct: 27 SSVSVAKAFGLKSRSMGRLTCMATYKVTFLDGETGAENVXECSDEEYXLDAAERAGMDLPYSCRAGACSSCAGIIKAGEVDQSDQSFLDDSQIDDGFVLTCVAYPASDCIIXTHQEENM 145
BLAST of CF832838 vs. ExPASy Swiss-Prot
Match: FER_SILPR (Ferredoxin, chloroplastic OS=Silene pratensis GN=PETF PE=2 SV=1) HSP 1 Score: 140.969 bits (354), Expect = 4.879e-33 Identity = 74/149 (49.66%), Postives = 97/149 (65.10%), Query Frame = 3 Query: 81 MSTVRLPTSCLFQAAPRSKKFSLVKSPASLGSTRSVSKAFGLKCSSF-KASAMAVYKVKLIGPNGEENEFDAPDDAYIIDSAEDAGMELPYSCRAGACSTCAGQMVSGSVDQSDGSFLDDKQMEKGFVLTCVAYPTSDCVIYTHKESEL 524 +ST+ + S L P+ + P ++G FGLK S + +AMA YKV LI FD PDD Y++D AE+ G++LPYSCRAG+CS+CAG++V+GSVDQSD SFLDD Q+E G+VLTC AYP++D I THKE EL Sbjct: 5 LSTLSVSASLL----PKQQPMVASSLPTNMGQA-----LFGLKAGSRGRVTAMATYKVTLITKESGTVTFDCPDDVYVLDQAEEEGIDLPYSCRAGSCSSCAGKVVAGSVDQSDQSFLDDDQIEAGWVLTCAAYPSADVTIETHKEEEL 144
BLAST of CF832838 vs. ExPASy Swiss-Prot
Match: FER_SCEQU (Ferredoxin OS=Scenedesmus quadricauda PE=1 SV=1) HSP 1 Score: 140.969 bits (354), Expect = 4.879e-33 Identity = 64/97 (65.98%), Postives = 81/97 (83.51%), Query Frame = 3 Query: 237 AVYKVKLIGPNGEENEFDAPDDAYIIDSAEDAGMELPYSCRAGACSTCAGQMVSGSVDQSDGSFLDDKQMEKGFVLTCVAYPTSDCVIYTHKESELY 527 A YKV L P+G++ + PDD YI+D+AE+AG++LPYSCRAGACS+CAG++ +G+VDQSD SFLDD QM+ GFVLTCVAYPTSDC I THKE +L+ Sbjct: 1 ATYKVTLKTPSGDQT-IECPDDTYILDAAEEAGLDLPYSCRAGACSSCAGKVEAGTVDQSDQSFLDDSQMDGGFVLTCVAYPTSDCTIATHKEEDLF 96
BLAST of CF832838 vs. ExPASy Swiss-Prot
Match: FER_SCOJA (Ferredoxin OS=Scopolia japonica PE=1 SV=1) HSP 1 Score: 140.584 bits (353), Expect = 6.373e-33 Identity = 66/96 (68.75%), Postives = 78/96 (81.25%), Query Frame = 3 Query: 237 AVYKVKLIGPNGEENEFDAPDDAYIIDSAEDAGMELPYSCRAGACSTCAGQMVSGSVDQSDGSFLDDKQMEKGFVLTCVAYPTSDCVIYTHKESEL 524 A YKVKL+ P+G EFD PDD YI+D AE+ G ELPYSCRAG+CS+CAG++ +G+VDQSDG+FLDD QM GFVLTCVAYP SD +I THKE EL Sbjct: 1 ATYKVKLVTPDGPV-EFDCPDDVYILDQAEEEGHELPYSCRAGSCSSCAGKVSAGTVDQSDGNFLDDDQMADGFVLTCVAYPQSDVIIETHKEEEL 95
BLAST of CF832838 vs. ExPASy Swiss-Prot
Match: FER_NOSMU (Ferredoxin OS=Nostoc muscorum PE=1 SV=2) HSP 1 Score: 140.584 bits (353), Expect = 6.373e-33 Identity = 66/99 (66.67%), Postives = 81/99 (81.82%), Query Frame = 3 Query: 234 MAVYKVKLIGP-NGEENEFDAPDDAYIIDSAEDAGMELPYSCRAGACSTCAGQMVSGSVDQSDGSFLDDKQMEKGFVLTCVAYPTSDCVIYTHKESELY 527 MA +KV LI G ++E + PDD YI+D+AE+ G +LP+SCRAGACSTCAG++VSG+VDQSD SFLDD Q+E G+VLTCVAYPTSD VI THKE +LY Sbjct: 1 MATFKVTLINEAEGTKHEIEVPDDEYILDAAEEEGYDLPFSCRAGACSTCAGKLVSGTVDQSDQSFLDDDQIEAGYVLTCVAYPTSDVVIQTHKEEDLY 99
BLAST of CF832838 vs. ExPASy Swiss-Prot
Match: FER_CHLFR (Ferredoxin OS=Chlorogloeopsis fritschii PE=1 SV=2) HSP 1 Score: 140.584 bits (353), Expect = 6.373e-33 Identity = 67/99 (67.68%), Postives = 78/99 (78.79%), Query Frame = 3 Query: 234 MAVYKVKLIGP-NGEENEFDAPDDAYIIDSAEDAGMELPYSCRAGACSTCAGQMVSGSVDQSDGSFLDDKQMEKGFVLTCVAYPTSDCVIYTHKESELY 527 MA YKV LI G + DD YI+D+AE+AG++LPYSCRAGACSTCAG++ SG+VDQSD SFLDD Q+E G+VLTCVAYPTSDC I THKE ELY Sbjct: 1 MATYKVTLINDAEGLNQTIEVDDDTYILDAAEEAGLDLPYSCRAGACSTCAGKIKSGTVDQSDQSFLDDDQIEAGYVLTCVAYPTSDCTIETHKEEELY 99
BLAST of CF832838 vs. ExPASy Swiss-Prot
Match: FER1_ANASP (Ferredoxin-1 OS=Anabaena sp. (strain PCC 7120) GN=petF PE=1 SV=2) HSP 1 Score: 140.584 bits (353), Expect = 6.373e-33 Identity = 66/99 (66.67%), Postives = 81/99 (81.82%), Query Frame = 3 Query: 234 MAVYKVKLIGP-NGEENEFDAPDDAYIIDSAEDAGMELPYSCRAGACSTCAGQMVSGSVDQSDGSFLDDKQMEKGFVLTCVAYPTSDCVIYTHKESELY 527 MA +KV LI G ++E + PDD YI+D+AE+ G +LP+SCRAGACSTCAG++VSG+VDQSD SFLDD Q+E G+VLTCVAYPTSD VI THKE +LY Sbjct: 1 MATFKVTLINEAEGTKHEIEVPDDEYILDAAEEQGYDLPFSCRAGACSTCAGKLVSGTVDQSDQSFLDDDQIEAGYVLTCVAYPTSDVVIQTHKEEDLY 99 The following BLAST results are available for this feature:
BLAST of CF832838 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 109
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Sequences
The
following sequences are available for this feature:
EST sequence >CF832838 ID=CF832838; Name=CF832838; organism=Citrus sinensis; type=EST; length=629bpback to top |