CF832838
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF832838 vs. ExPASy Swiss-Prot
Match: FER3_RAPSA (Ferredoxin, leaf L-A OS=Raphanus sativus PE=1 SV=1) HSP 1 Score: 135.961 bits (341), Expect = 1.570e-31 Identity = 62/96 (64.58%), Postives = 79/96 (82.29%), Query Frame = 3 Query: 237 AVYKVKLIGPNGEENEFDAPDDAYIIDSAEDAGMELPYSCRAGACSTCAGQMVSGSVDQSDGSFLDDKQMEKGFVLTCVAYPTSDCVIYTHKESEL 524 A YKVK I P GE+ E + DD Y++D+AE+AG++LPYSCRAG+CS+CAG++VSGSVDQSD SFLDD Q+ +GFVLTC AYPTSD I TH+E ++ Sbjct: 1 ATYKVKFITPEGEQ-EVECDDDVYVLDAAEEAGIDLPYSCRAGSCSSCAGKVVSGSVDQSDQSFLDDDQIAEGFVLTCAAYPTSDVTIETHREEDM 95
BLAST of CF832838 vs. ExPASy Swiss-Prot
Match: FER_LYCCN (Ferredoxin OS=Lycium chinense PE=1 SV=1) HSP 1 Score: 135.576 bits (340), Expect = 2.050e-31 Identity = 64/96 (66.67%), Postives = 76/96 (79.17%), Query Frame = 3 Query: 237 AVYKVKLIGPNGEENEFDAPDDAYIIDSAEDAGMELPYSCRAGACSTCAGQMVSGSVDQSDGSFLDDKQMEKGFVLTCVAYPTSDCVIYTHKESEL 524 A YKVKL+ P+G EFD PDD YI+D AE+ G ELPYSCRAG+CS+CAG++ +G+VDQSDG+FLDD Q+ GFVLTCVAYP SD I THKE L Sbjct: 1 ATYKVKLVTPDGPV-EFDCPDDVYILDQAEEEGHELPYSCRAGSCSSCAGKVSAGTVDQSDGNFLDDDQIADGFVLTCVAYPQSDVTIETHKEEAL 95
BLAST of CF832838 vs. ExPASy Swiss-Prot
Match: FER_CHLRE (Ferredoxin, chloroplastic OS=Chlamydomonas reinhardtii GN=PETF PE=1 SV=2) HSP 1 Score: 135.576 bits (340), Expect = 2.050e-31 Identity = 65/102 (63.73%), Postives = 81/102 (79.41%), Query Frame = 3 Query: 222 KASAMAVYKVKLIGPNGEENEFDAPDDAYIIDSAEDAGMELPYSCRAGACSTCAGQMVSGSVDQSDGSFLDDKQMEKGFVLTCVAYPTSDCVIYTHKESELY 527 + S MA YKV L P+G++ + P D YI+D+AE+AG++LPYSCRAGACS+CAG++ +G+VDQSD SFLDD QM GFVLTCVAYPTSDC I TH+E LY Sbjct: 27 RMSCMA-YKVTLKTPSGDKT-IECPADTYILDAAEEAGLDLPYSCRAGACSSCAGKVAAGTVDQSDQSFLDDAQMGNGFVLTCVAYPTSDCTIQTHQEEALY 126
BLAST of CF832838 vs. ExPASy Swiss-Prot
Match: FER1_SYNP6 (Ferredoxin-1 OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=petF1 PE=1 SV=2) HSP 1 Score: 135.576 bits (340), Expect = 2.050e-31 Identity = 65/99 (65.66%), Postives = 76/99 (76.77%), Query Frame = 3 Query: 234 MAVYKVKLIGP-NGEENEFDAPDDAYIIDSAEDAGMELPYSCRAGACSTCAGQMVSGSVDQSDGSFLDDKQMEKGFVLTCVAYPTSDCVIYTHKESELY 527 MA YKV L+ G D DD YI+D+AE+ G++LPYSCRAGACSTCAG++VSG+VDQSD SFLDD Q+ GFVLTCVAYPTSD I THKE +LY Sbjct: 1 MATYKVTLVNAAEGLNTTIDVADDTYILDAAEEQGIDLPYSCRAGACSTCAGKVVSGTVDQSDQSFLDDDQIAAGFVLTCVAYPTSDVTIETHKEEDLY 99
BLAST of CF832838 vs. ExPASy Swiss-Prot
Match: FER1_SYNE7 (Ferredoxin-1 OS=Synechococcus elongatus (strain PCC 7942) GN=petF PE=3 SV=2) HSP 1 Score: 135.576 bits (340), Expect = 2.050e-31 Identity = 65/99 (65.66%), Postives = 76/99 (76.77%), Query Frame = 3 Query: 234 MAVYKVKLIGP-NGEENEFDAPDDAYIIDSAEDAGMELPYSCRAGACSTCAGQMVSGSVDQSDGSFLDDKQMEKGFVLTCVAYPTSDCVIYTHKESELY 527 MA YKV L+ G D DD YI+D+AE+ G++LPYSCRAGACSTCAG++VSG+VDQSD SFLDD Q+ GFVLTCVAYPTSD I THKE +LY Sbjct: 1 MATYKVTLVNAAEGLNTTIDVADDTYILDAAEEQGIDLPYSCRAGACSTCAGKVVSGTVDQSDQSFLDDDQIAAGFVLTCVAYPTSDVTIETHKEEDLY 99
BLAST of CF832838 vs. ExPASy Swiss-Prot
Match: FER1_MAIZE (Ferredoxin-1, chloroplastic OS=Zea mays GN=FDX1 PE=1 SV=1) HSP 1 Score: 135.576 bits (340), Expect = 2.050e-31 Identity = 77/142 (54.23%), Postives = 93/142 (65.49%), Query Frame = 3 Query: 123 APRSKKF-----SLVKSPASLGSTRSVSKA--FGLKCSSFKA-SAMAVYKVKLIGPNGEENEFDAPDDAYIIDSAEDAGMELPYSCRAGACSTCAGQMVSGSVDQSDGSFLDDKQMEKGFVLTCVAYPTSDCVIYTHKESEL 524 +PR+ F SL +PA +K G SS + A A Y VKLI P GE E PDD YI+D AE+ G++LPYSCRAG+CS+CAG++VSGSVDQSD S+LDD Q+ G+VLTC AYPTSD VI THKE EL Sbjct: 7 SPRAPAFFFSSSSLRAAPAPTAVALPAAKVGIMGRSASSRRRLRAQATYNVKLITPEGEV-ELQVPDDVYILDQAEEDGIDLPYSCRAGSCSSCAGKVVSGSVDQSDQSYLDDGQIADGWVLTCHAYPTSDVVIETHKEEEL 147
BLAST of CF832838 vs. ExPASy Swiss-Prot
Match: FER_ARCLA (Ferredoxin OS=Arctium lappa PE=1 SV=1) HSP 1 Score: 134.806 bits (338), Expect = 3.497e-31 Identity = 64/96 (66.67%), Postives = 77/96 (80.21%), Query Frame = 3 Query: 237 AVYKVKLIGPNGEENEFDAPDDAYIIDSAEDAGMELPYSCRAGACSTCAGQMVSGSVDQSDGSFLDDKQMEKGFVLTCVAYPTSDCVIYTHKESEL 524 A YKV LI P G++ EF+ PDD YI+D A + +LPYSCRAG+CS+CAG++ +GSVDQSDGS+LDD QME G+VLTCVAYPTSD I THKE EL Sbjct: 1 ATYKVTLITPEGKQ-EFEVPDDVYILDHAAEEVGDLPYSCRAGSCSSCAGKVTAGSVDQSDGSYLDDDQMEAGWVLTCVAYPTSDVTIETHKEEEL 95
BLAST of CF832838 vs. ExPASy Swiss-Prot
Match: FER1_HYONI (Ferredoxin-1 OS=Hyoscyamus niger PE=1 SV=1) HSP 1 Score: 134.806 bits (338), Expect = 3.497e-31 Identity = 63/96 (65.62%), Postives = 77/96 (80.21%), Query Frame = 3 Query: 237 AVYKVKLIGPNGEENEFDAPDDAYIIDSAEDAGMELPYSCRAGACSTCAGQMVSGSVDQSDGSFLDDKQMEKGFVLTCVAYPTSDCVIYTHKESEL 524 A YKVKL+ P+G EF+ PDD YI+D AE+ G ELPYSCRAG+CS+CAG++ +G+VDQSDG+FLDD Q+ GFVLTCVAYP SD I THKE +L Sbjct: 1 ATYKVKLVTPDGPV-EFNCPDDVYILDQAEEEGHELPYSCRAGSCSSCAGKVSAGTVDQSDGNFLDDDQIADGFVLTCVAYPQSDVTIETHKEEDL 95
BLAST of CF832838 vs. ExPASy Swiss-Prot
Match: FER_SOLLY (Ferredoxin OS=Solanum lyratum PE=1 SV=1) HSP 1 Score: 134.42 bits (337), Expect = 4.567e-31 Identity = 64/96 (66.67%), Postives = 77/96 (80.21%), Query Frame = 3 Query: 237 AVYKVKLIGPNGEENEFDAPDDAYIIDSAEDAGMELPYSCRAGACSTCAGQMVSGSVDQSDGSFLDDKQMEKGFVLTCVAYPTSDCVIYTHKESEL 524 A YKVKLI P G EF+ PDD YI+DSAE+ G +LPYSCRAGACS+CAG++ +G+VDQSD SFLDD Q+ +GFVLTCVAYP S+ I THKE +L Sbjct: 1 ATYKVKLITPEGPV-EFNCPDDVYILDSAEENGHDLPYSCRAGACSSCAGKITAGNVDQSDNSFLDDDQVAEGFVLTCVAYPKSNVTIETHKEDDL 95
BLAST of CF832838 vs. ExPASy Swiss-Prot
Match: FER_SYNP4 (Ferredoxin OS=Synechococcus sp. (strain PCC 7418) PE=1 SV=2) HSP 1 Score: 134.035 bits (336), Expect = 5.965e-31 Identity = 64/99 (64.65%), Postives = 75/99 (75.76%), Query Frame = 3 Query: 234 MAVYKVKLIGPNGEENE-FDAPDDAYIIDSAEDAGMELPYSCRAGACSTCAGQMVSGSVDQSDGSFLDDKQMEKGFVLTCVAYPTSDCVIYTHKESELY 527 MA YKV LI NE + PDD YI+D AE+ G++LPYSCRAGACSTCAG++ G +DQSD SFLDD Q+E G+VLTCVAYP SDC I TH+E ELY Sbjct: 1 MASYKVTLINEEMGLNETIEVPDDEYILDVAEEEGIDLPYSCRAGACSTCAGKIKEGEIDQSDQSFLDDDQIEAGYVLTCVAYPASDCTIITHQEEELY 99 The following BLAST results are available for this feature:
BLAST of CF832838 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 109
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Sequences
The
following sequences are available for this feature:
EST sequence >CF832838 ID=CF832838; Name=CF832838; organism=Citrus sinensis; type=EST; length=629bpback to top |