CF832842

Overview
NameCF832842
Unique NameCF832842
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length786
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF832842 vs. ExPASy Swiss-Prot
Match: PAPL_HUMAN (Iron/zinc purple acid phosphatase-like protein OS=Homo sapiens GN=PAPL PE=2 SV=2)

HSP 1 Score: 75.485 bits (184), Expect = 3.742e-13
Identity = 64/221 (28.96%), Postives = 98/221 (44.34%), Query Frame = 2
Query:    5 FHSPYRAPYSTAPFWYSIRRASAHIIVMSC----YSAFGKYTPQ--YKWLEKEFPKVN--RSETPWLIVLMHCPLY------------NSYVHHYMEGEPMRVLY--EPWFVEYKVDVVFAGHVHAYERSERMSNIAYNVTNALCS-PVSDQSAPVYITIGDGGNQEGLAKEMTEPQPRYSAYREASFGHGILDVKNRTHAYFGWHRNQDDYAVEADSVWL 598
            + + +  P      WYS     AHII  S     +  +G++  Q  ++WLE +  K N  R+  PW+I + H P+Y             S V   ++G+    LY  E  F +Y VD+    H H+YER   + N  Y V N     P ++   PV+I  G  G +E L      P+P +SA R   +G+  L + N TH +     +  D  +  D VW+
Sbjct:  215 YKARFSMPGDNEGLWYSWDLGPAHIISFSTEVYFFLHYGRHLVQRQFRWLESDLQKANKNRAARPWIITMGHRPMYCSNADLDDCTRHESKVRKGLQGK----LYGLEDLFYKYGVDLQLWAHEHSYERLWPIYN--YQVFNGSREMPYTNPRGPVHIITGSAGCEERLTPFAVFPRP-WSAVRVKEYGYTRLHILNGTHIHIQQVSDDQDGKI-VDDVWV 427          
BLAST of CF832842 vs. ExPASy Swiss-Prot
Match: PAPL_DANRE (Iron/zinc purple acid phosphatase-like protein OS=Danio rerio GN=papl PE=2 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.857e-12
Identity = 70/226 (30.97%), Postives = 97/226 (42.92%), Query Frame = 2
Query:   11 SPYRAPYS----TAPFWYSIRRASAHIIVMSC-----YSAFGK--YTPQYKWLEKEFPKVNR----SETPWLIVLMHCPLY------------NSYVH-HYMEGEPMRVLYEPWFVEYKVDVVFAGHVHAYERSERMSNIAYNVTNALC-SPVSDQSAPVYITIGDGGNQEGLAKEMTEPQPR-YSAYREASFGHGILDVKNRTHAYFGWHRNQDDYAVEADSVWL 598
            S YRA +S    T   WYS     AHII  S      Y  +G      QY+WL  +  + NR    +E PW+I + H P+Y             SYV     + +P     E  F +Y VD+    H H YER   + +  Y V N     P  +  APV+I  G  G +E    +   P+PR +SA+R   +G+  L + N TH Y     + D Y    D + L
Sbjct:  212 SQYRARFSMPGDTEGLWYSWNVGPAHIISFSTEVYFYYLEYGLDLLFRQYEWLRADLQEANRPENRAERPWIITMGHRPMYCSNDDDDDCTHFQSYVRLGRNDTKPPAPGLEELFYQYGVDLELWAHEHTYERLWPVYD--YKVFNGSSEEPYVNPKAPVHIITGSAGCRE--KHDGFIPKPRDWSAFRSTDYGYTRLQLINNTHLYLE-QVSDDQYGKVIDQMTL 432          
BLAST of CF832842 vs. ExPASy Swiss-Prot
Match: PPA1_ARATH (Probable inactive purple acid phosphatase 1 OS=Arabidopsis thaliana GN=PAP1 PE=1 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 4.574e-11
Identity = 57/192 (29.69%), Postives = 87/192 (45.31%), Query Frame = 2
Query:   17 YRAPYSTAPFWYSIRRASAHIIVMSCYSAFGKYTPQYKWLEKEFPKVNRSETPWLIVLMHCPLYNSYVHHYME----GEPM-RVLYEPWFVEYKVDVVFAGHVHAYERSERMSNIAYNVTNALCS--PVSDQSAPV--YITIGDGGNQEGLAKEMTEPQPRYSAYREASFGHGILDVKNRTHAYFGWHRNQD 565
            Y    + A  WYS         V      + + T QY ++E     V+R + PWLI L H  L  S  + Y E     EPM R   +  + +YKVD+   GH H YER+         V  ++C+    S+  AP+   I I  GG   GLA E ++ QP +S +R+  +G   L   + ++  F + ++ D
Sbjct:  399 YVPAQNRAKVWYSSDYGMFRFCVADTEHDWREGTEQYNFIEHCLASVDRQKQPWLIFLAHRVLGYSSTYFYAEEGSFAEPMGRESLQKLWQKYKVDIAIYGHAHNYERT-------CPVYQSVCTSHEKSNYKAPLNGTIHIVAGGGGAGLA-EFSDLQPNWSLFRDYDYGFLKLTAIDHSNLLFEYKKSSD 582          
BLAST of CF832842 vs. ExPASy Swiss-Prot
Match: PPA9_ARATH (Probable inactive purple acid phosphatase 9 OS=Arabidopsis thaliana GN=PAP9 PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 5.974e-11
Identity = 58/193 (30.05%), Postives = 85/193 (44.04%), Query Frame = 2
Query:   47 WYSIRRASAHIIVMSCYSAFGKYTPQYKWLEKEFPKVNRSETPWLIVLMHCPLYNS--YVHHYMEGEPMRVLYEPWFVEYKVDVVFAGHVHAYERSERMSNIAYNVTNALCSPVSDQSAPVYITIGDGGNQEGLAKEMTE-----------PQPRYSAYREASFGH--GILDVKNRTHAYFGWHRNQDDYAVE 580
            +YS    S H + +S  + F K   QY +L+ +   VNRS+TP+++V  H P+Y +   +      E M    EP  V+  V V   GHVH YER          ++N  C     Q  PV++ IG  G     ++ M E           PQP  S YR   FG+   + + +  T +Y G H  +    VE
Sbjct:  395 YYSYDMGSVHFVYISTETDFLKGGKQYSFLKSDLESVNRSKTPFVVVQGHRPMYTTSRKIRDAAIREKMIEHLEPLLVKNNVTVALWGHVHRYER-------FCAISNNTCGE-RWQGNPVHLVIGMAGKD---SQPMWEPRANHEDVPIFPQPANSMYRGGEFGYIRLVANKERLTLSYVGNHDGEVHDVVE 576          
The following BLAST results are available for this feature:
BLAST of CF832842 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 24
Match NameE-valueIdentityDescription
PAPL_HUMAN3.742e-1328.96Iron/zinc purple acid phosphatase-like protein OS=... [more]
PAPL_DANRE1.857e-1230.97Iron/zinc purple acid phosphatase-like protein OS=... [more]
PPA1_ARATH4.574e-1129.69Probable inactive purple acid phosphatase 1 OS=Ara... [more]
PPA9_ARATH5.974e-1130.05Probable inactive purple acid phosphatase 9 OS=Ara... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS02_02I14_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa02I14, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832842 ID=CF832842; Name=CF832842; organism=Citrus sinensis; type=EST; length=786bp
CCGTTTTCATTCACCATACAGAGCACCATATAGTACTGCTCCTTTTTGGT
ACTCTATTAGAAGAGCTTCAGCACATATCATTGTCATGTCATGTTACTCT
GCTTTTGGGAAATACACGCCTCAATACAAATGGCTGGAAAAGGAGTTCCC
AAAAGTGAACAGAAGCGAGACACCATGGCTTATTGTTCTCATGCATTGTC
CTCTATACAATAGTTATGTACACCATTATATGGAAGGAGAACCTATGAGA
GTACTGTACGAGCCATGGTTTGTGGAGTACAAAGTTGATGTCGTCTTTGC
TGGTCATGTTCATGCCTATGAGCGATCTGAACGGATGTCCAACATTGCAT
ACAATGTGACAAATGCCTTATGCAGCCCAGTTAGCGATCAATCTGCTCCA
GTTTACATAACCATTGGAGATGGAGGAAATCAAGAAGGATTGGCAAAAGA
AATGACAGAGCCACAGCCTAGATATTCAGCATATCGTGAAGCTAGCTTCG
GCCACGGGATACTTGATGTAAAGAACAGGACTCATGCCTACTTTGGCTGG
CATCGCAATCAAGATGATTATGCAGTAGAAGCTGATTCTGTATGGCTGCA
TAACAGATACTGGAAACCTTCAGGGGAACTGCCCAGAGCTGCAATATAAT
GCCAGGGTTATTTCTACGCCAAGTTGATACGAAACATGTAAACGCTCTTG
TTAGGCATGCAGAGGATTTGGACAGGTAGTCACGTGGAATCTTTCTTGAA
GAAACGTGTTTTCATTTTCTTAATAAAGCATCATAC
back to top