CF832936

Overview
NameCF832936
Unique NameCF832936
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length729
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF832936 vs. ExPASy Swiss-Prot
Match: AQP_CICVR (Aquaporin AQPcic OS=Cicadella viridis GN=AQP PE=1 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.440e-16
Identity = 49/145 (33.79%), Postives = 76/145 (52.41%), Query Frame = -1
Query:  295 YMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVGLAAEIIGPFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYTKDKAWDDQWLFWVGPFIGAAIAAFSPQFILRA 729
            Y++ QC+GAI+G  ++K    + + R       LA G +  +G   E    FVL+  V S  D +R     ++   AP+ +G A+   HLA I  TG+ +NPARS G AV    D  W + W++W GP +G  +A  + + + RA
Sbjct:  106 YIIVQCVGAIAGSAILKVITPAEF-RGTLCMTSLAPGVTPPMGFLVEACITFVLILLVQSVCDDRRK----NLGNAAPVAVGLAITCCHLAAIKYTGSSMNPARSFGPAV--NGDDNWANHWVYWAGPIVGGVVAGITYRALFRA 243          
BLAST of CF832936 vs. ExPASy Swiss-Prot
Match: AQP5_PIG (Aquaporin-5 OS=Sus scrofa GN=AQP5 PE=2 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 1.881e-16
Identity = 54/144 (37.50%), Postives = 79/144 (54.86%), Query Frame = -1
Query:  301 YMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVGLAAEIIGPFVLVYTVFSATDPKRSARDSHVPVLAP-LPIGFAVFMVHLATIPITGTGINPARSLGAAVIYTKDKAWDDQWLFWVGPFIGAAIAAFSPQFIL 729
            Y+VAQ +GAI+G G++         R     N L +  + G  +  E+I  F L   +FS+TD +R++     PV +P L IG +V + HL  I  TG  +NPARS G AV+  +       W+FWVGP +GAA+AA    ++L
Sbjct:   90 YVVAQLVGAIAGAGILYGLAPGN-ARGNLAVNSLNNNTTPGQAVVVEMILTFQLALCIFSSTDSRRTS-----PVGSPALSIGLSVTLGHLVGIYFTGCSMNPARSFGPAVVMNRFS--PSHWVFWVGPIVGAAVAAILYFYLL 225          
BLAST of CF832936 vs. ExPASy Swiss-Prot
Match: MIP_CHICK (Lens fiber major intrinsic protein OS=Gallus gallus GN=MIP PE=1 SV=2)

HSP 1 Score: 83.9593 bits (206), Expect = 9.335e-16
Identity = 49/136 (36.03%), Postives = 74/136 (54.41%), Query Frame = -1
Query:  322 YMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVGLAAEIIGPFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYTKDKAWDDQWLFWVGPFIGAAIAA 729
            Y++AQ LGA++G G++     +   R   G + L      G G   E++     +  VF++ D +   R    P  A LP+GF++ + HL  IP TG G+NPARS   AVI    + + + W+FW GP +GAA+AA
Sbjct:   89 YLLAQLLGALAGAGVLYGVTPAA-VRGTLGLSALHPSVGPGQGTVVELLLTAQFILCVFASFDDRHDGR----PGSAALPVGFSLALGHLFGIPFTGAGMNPARSFAPAVI---TRNFTNHWVFWAGPLLGAALAA 216          
BLAST of CF832936 vs. ExPASy Swiss-Prot
Match: AQP2_SHEEP (Aquaporin-2 OS=Ovis aries GN=AQP2 PE=2 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.592e-15
Identity = 49/143 (34.27%), Postives = 74/143 (51.75%), Query Frame = -1
Query:  301 YMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVGLAAEIIGPFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYTKDKAWDDQWLFWVGPFIGAAIAAFSPQFIL 729
            Y+ AQ LGA++G  L+         R     N L +  + G  +  E+     LV  +F +TD +R  +  H      L IGF+V + HL  I  TG  +NPARSL  A++  K   +DD W+FW+GP +GA +A+    ++L
Sbjct:   89 YVAAQLLGAVAGAALLHEITPPAI-RGDLAVNALNNNSTAGQAVTVELFLTLQLVLCIFPSTDKRRGKQLGH----PALSIGFSVALGHLLGIHYTGCSMNPARSLAPAIVTGK---FDDHWVFWIGPLVGAIVASLLYNYVL 223          
BLAST of CF832936 vs. ExPASy Swiss-Prot
Match: AQP2_HUMAN (Aquaporin-2 OS=Homo sapiens GN=AQP2 PE=1 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.592e-15
Identity = 49/143 (34.27%), Postives = 75/143 (52.45%), Query Frame = -1
Query:  301 YMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVGLAAEIIGPFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYTKDKAWDDQWLFWVGPFIGAAIAAFSPQFIL 729
            Y+ AQ LGA++G  L+     +   R     N L++  + G  +  E+     LV  +F++TD +R       P    L IGF+V + HL  I  TG  +NPARSL  AV+  K   +DD W+FW+GP +GA + +    ++L
Sbjct:   89 YVAAQLLGAVAGAALLHEITPADI-RGDLAVNALSNSTTAGQAVTVELFLTLQLVLCIFASTDERRGEN----PGTPALSIGFSVALGHLLGIHYTGCSMNPARSLAPAVVTGK---FDDHWVFWIGPLVGAILGSLLYNYVL 223          
BLAST of CF832936 vs. ExPASy Swiss-Prot
Match: AQP5_MOUSE (Aquaporin-5 OS=Mus musculus GN=Aqp5 PE=2 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 2.080e-15
Identity = 52/144 (36.11%), Postives = 78/144 (54.17%), Query Frame = -1
Query:  301 YMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVGLAAEIIGPFVLVYTVFSATDPKRSARDSHVPVLAP-LPIGFAVFMVHLATIPITGTGINPARSLGAAVIYTKDKAWDDQWLFWVGPFIGAAIAAFSPQFIL 729
            Y+ AQ +GAI+G G++         R     N L++  + G  +  E+I  F L   +FS+TD +R++     PV +P L IG +V + HL  I  TG  +NPARS G AV+  +       W+FWVGP +GA +AA    ++L
Sbjct:   90 YVAAQLVGAIAGAGILYWLAPGN-ARGNLAVNALSNNTTPGKAVVVELILTFQLALCIFSSTDSRRTS-----PVGSPALSIGLSVTLGHLVGIYFTGCSMNPARSFGPAVVMNRFS--PSHWVFWVGPIVGAVLAAILYFYLL 225          
BLAST of CF832936 vs. ExPASy Swiss-Prot
Match: TIP12_ORYSJ (Probable aquaporin TIP1-2 OS=Oryza sativa subsp. japonica GN=TIP1-2 PE=2 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 2.716e-15
Identity = 58/141 (41.13%), Postives = 76/141 (53.90%), Query Frame = -1
Query:  322 YMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVG----LAAEIIGPFVLVYTVFS-ATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYTKDKAWDDQWLFWVGPFIGAAIAA 729
            Y VAQ LG++    L+K           GGA   A   S GVG    +  EI+  F LVYTV++ A DPK+      + V+AP+ IGF V    LA     G  +NPA S G AV+      WD+ W++W+GPF+GAAIAA
Sbjct:  106 YWVAQLLGSVVACLLLKIAT--------GGAAVGAFSLSAGVGAWNAVVFEIVMTFGLVYTVYATAVDPKKG----DLGVIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPAVV---TGVWDNHWVYWLGPFVGAAIAA 231          
BLAST of CF832936 vs. ExPASy Swiss-Prot
Match: TIP32_ARATH (Probable aquaporin TIP3-2 OS=Arabidopsis thaliana GN=TIP3-2 PE=2 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 3.547e-15
Identity = 54/144 (37.50%), Postives = 76/144 (52.78%), Query Frame = -1
Query:  301 YMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVGLAAEIIGPFVLVYTVFS-ATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYTKDKAWDDQWLFWVGPFIGAAIAAFSPQFIL 729
            Y VAQ +GAI    L++                +A G S   GL  EII  F LVY V+S A DPKR +    + ++APL IG  V    L   P  G  +NPAR+ G A++  +   W + W++WVGPFIG A+AA   ++++
Sbjct:  114 YWVAQLIGAILACLLLRLATNGLRPV----GFHVASGVSELHGLLMEIILTFALVYVVYSTAIDPKRGS----IGIIAPLAIGLIVGANILVGGPFDGASMNPARAFGPALVGWR---WSNHWIYWVGPFIGGALAALIYEYMI 246          
BLAST of CF832936 vs. ExPASy Swiss-Prot
Match: TIP31_ARATH (Aquaporin TIP3-1 OS=Arabidopsis thaliana GN=TIP3-1 PE=2 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 3.547e-15
Identity = 54/144 (37.50%), Postives = 76/144 (52.78%), Query Frame = -1
Query:  301 YMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVGLAAEIIGPFVLVYTVFSAT-DPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYTKDKAWDDQWLFWVGPFIGAAIAAFSPQFIL 729
            Y +AQ LGAI    L++                LA G     GL  EII  F LVY V+S   DPKR +    + ++APL IG  V    L   P +G  +NPAR+ G A++  +   W D W++WVGPFIG+A+AA   ++++
Sbjct:  114 YWIAQLLGAILACLLLRLTTNGMRPV----GFRLASGVGAVNGLVLEIILTFGLVYVVYSTLIDPKRGS----LGIIAPLAIGLIVGANILVGGPFSGASMNPARAFGPALVGWR---WHDHWIYWVGPFIGSALAALIYEYMV 246          
BLAST of CF832936 vs. ExPASy Swiss-Prot
Match: AQP5_RAT (Aquaporin-5 OS=Rattus norvegicus GN=Aqp5 PE=2 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 3.547e-15
Identity = 52/144 (36.11%), Postives = 78/144 (54.17%), Query Frame = -1
Query:  301 YMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVGLAAEIIGPFVLVYTVFSATDPKRSARDSHVPVLAP-LPIGFAVFMVHLATIPITGTGINPARSLGAAVIYTKDKAWDDQWLFWVGPFIGAAIAAFSPQFIL 729
            Y+ AQ +GAI+G G++  +      R     N L +  + G  +  E+I  F L   +FS+TD +R++     PV +P L IG +V + HL  I  TG  +NPARS G AV+  +       W+FWVGP +GA +AA    ++L
Sbjct:   90 YVAAQLVGAIAGAGILY-WLAPLNARGNLAVNALNNNTTPGKAMVVELILTFQLALCIFSSTDSRRTS-----PVGSPALSIGLSVTLGHLVGIYFTGCSMNPARSFGPAVVMNRFS--PSHWVFWVGPIVGAMLAAILYFYLL 225          
The following BLAST results are available for this feature:
BLAST of CF832936 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 133
Match NameE-valueIdentityDescription
AQP_CICVR1.440e-1633.79Aquaporin AQPcic OS=Cicadella viridis GN=AQP PE=1 ... [more]
AQP5_PIG1.881e-1637.50Aquaporin-5 OS=Sus scrofa GN=AQP5 PE=2 SV=1[more]
MIP_CHICK9.335e-1636.03Lens fiber major intrinsic protein OS=Gallus gallu... [more]
AQP2_SHEEP1.592e-1534.27Aquaporin-2 OS=Ovis aries GN=AQP2 PE=2 SV=1[more]
AQP2_HUMAN1.592e-1534.27Aquaporin-2 OS=Homo sapiens GN=AQP2 PE=1 SV=1[more]
AQP5_MOUSE2.080e-1536.11Aquaporin-5 OS=Mus musculus GN=Aqp5 PE=2 SV=1[more]
TIP12_ORYSJ2.716e-1541.13Probable aquaporin TIP1-2 OS=Oryza sativa subsp. j... [more]
TIP32_ARATH3.547e-1537.50Probable aquaporin TIP3-2 OS=Arabidopsis thaliana ... [more]
TIP31_ARATH3.547e-1537.50Aquaporin TIP3-1 OS=Arabidopsis thaliana GN=TIP3-1... [more]
AQP5_RAT3.547e-1536.11Aquaporin-5 OS=Rattus norvegicus GN=Aqp5 PE=2 SV=1[more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_02L05_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa02L05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832936 ID=CF832936; Name=CF832936; organism=Citrus sinensis; type=EST; length=729bp
TTTTTTTTTTTTTTTTTGAATTCTAAGGAAAGTGCTTGAAAACAACAGAG
GGGATTACAAAAAAGCGAGCCCCCTCATTGTCTAAGAGACTTTTTGCCTA
CAACTCCTTGAAAGCACAAATCACACCCCCCCTCATTATTCACTTTTTGA
AACTTAACACACCTCTACTCCTTCCCAGTTTTTTCTTTCCAATTTTAAAT
CATTAACCCCATGAAGATGGGGATAATCCACTTGTCGAAACTAAAATCAG
ACACGGGATTGGCTCCTGAATGAACCAAGAGCCTTGACAGCTCCAGCTCT
CAAGATGAATTGGGGGGAGAAAGCCGCAATTGCTGCACCGATGAAGGGTC
CAACCCAAAAAAGCCATTGATCATCCCAAGCCTTGTCCTTGGTGTAAATA
ACAGCGGCCCCGAGACTCCTTGCTGGGTTAATGCCAGTGCCAGTGATTGG
GATTGTGGCCAAGTGTACCATGAACACAGCAAATCCAATGGGGAGCGGTG
CCAAAACGGGGACATGGGAGTCTCTGGCGCTTCTCTTGGGATCAGTGGCC
GAGAAGACAGTGTAAACCAACACAAAGGGGCCGATGATCTCGGCGGCCAA
TCCAACGCCTGTGCTGTACCCATCGGCCAGCTCGTTGGCCCCACCTCCGT
ACCTTGTGTAGTAAGATTTTTGGAAAGCCTTGACCAACCCCACACCGGAG
ATTGCACCAAGGCACTGCGCCACCATGTA
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