CF832939
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF832939 vs. ExPASy Swiss-Prot
Match: PIP13_MAIZE (Aquaporin PIP1-3/PIP1-4 OS=Zea mays GN=PIP1-3 PE=2 SV=1) HSP 1 Score: 251.136 bits (640), Expect = 1.860e-66 Identity = 118/161 (73.29%), Postives = 137/161 (85.09%), Query Frame = 3 Query: 3 IFVLFYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVGLAAEIIGTFVLVYTVFSATDPKRSSRDSHVPVLAPLPIGFAEYMVHLATIPITGTGINPAKSLRAAVIYNKDMAWDDPWLF 485 IF L YCTAGISGGHINPAVTFGLFLARK+SL RA+ Y++ QCLGAI G G+VK FQ+ Y GGGAN +A GY+ G GL AEI+GTF+LVYTVFSATD KR++RDSHVP+LAPLPIGFA ++VHLATIPITGTGINPA+SL AA+IYN+D AW D W+F Sbjct: 104 IFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAIFYIIMQCLGAICGAGVVKGFQQGLYMGNGGGANVVAPGYTKGDGLGAEIVGTFILVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNRDHAWSDHWIF 264
BLAST of CF832939 vs. ExPASy Swiss-Prot
Match: PIP12_MAIZE (Aquaporin PIP1-2 OS=Zea mays GN=PIP1-2 PE=1 SV=1) HSP 1 Score: 250.366 bits (638), Expect = 3.172e-66 Identity = 117/161 (72.67%), Postives = 138/161 (85.71%), Query Frame = 3 Query: 3 IFVLFYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVGLAAEIIGTFVLVYTVFSATDPKRSSRDSHVPVLAPLPIGFAEYMVHLATIPITGTGINPAKSLRAAVIYNKDMAWDDPWLF 485 IF L YCTAGISGGHINPAVTFGLFLARK+SL RA+ Y++ QCLGA+ G G+VK FQ+ Y GGGAN +A GY+ G GL AEI+GTF+LVYTVFSATD KR++RDSHVP+LAPLPIGFA ++VHLATIPITGTGINPA+SL AA+IYN+D AW+D W+F Sbjct: 101 IFALVYCTAGISGGHINPAVTFGLFLARKLSLTRALFYIIMQCLGAVCGAGVVKGFQQGLYMGNGGGANVVAPGYTKGDGLGAEIVGTFILVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNRDHAWNDHWIF 261
BLAST of CF832939 vs. ExPASy Swiss-Prot
Match: PIP15_MAIZE (Aquaporin PIP1-5 OS=Zea mays GN=PIP1-5 PE=2 SV=1) HSP 1 Score: 249.595 bits (636), Expect = 5.411e-66 Identity = 119/161 (73.91%), Postives = 136/161 (84.47%), Query Frame = 3 Query: 3 IFVLFYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVGLAAEIIGTFVLVYTVFSATDPKRSSRDSHVPVLAPLPIGFAEYMVHLATIPITGTGINPAKSLRAAVIYNKDMAWDDPWLF 485 IF L YCTAGISGGHINPAVTFGLFLARK+SL RA+ YMV QCLGAI G G+VK FQ+ Y GGGAN + GY+ G GL AEI+GTFVLVYTVFSATD KRS+RDSHVP+LAPLPIGFA ++VHLATIPITGTGINPA+SL AA++YN+ AW+D W+F Sbjct: 100 IFALVYCTAGISGGHINPAVTFGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFQEGLYMGAGGGANAVNPGYTKGDGLGAEIVGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIVYNRSHAWNDHWIF 260
BLAST of CF832939 vs. ExPASy Swiss-Prot
Match: PIP1_SOLLC (Probable aquaporin PIP-type pTOM75 OS=Solanum lycopersicum PE=2 SV=1) HSP 1 Score: 248.825 bits (634), Expect = 9.230e-66 Identity = 121/161 (75.16%), Postives = 135/161 (83.85%), Query Frame = 3 Query: 3 IFVLFYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVGLAAEIIGTFVLVYTVFSATDPKRSSRDSHVPVLAPLPIGFAEYMVHLATIPITGTGINPAKSLRAAVIYNKDMAWDDPWLF 485 IF L YCTAGISGGHINPAVTFGLFLARK+SL RAV YMV QCLGAI G G+VK F Y R GGGAN + GY+ G GL AEIIGTFVLVYTVFSATD KR++RDSHVP+LAPLPIGFA ++VHLATIPITGTGINPA+SL AA+IYN + AW+D W+F Sbjct: 99 IFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYMVMQCLGAICGAGVVKGFMVGPYQRLGGGANVVNPGYTKGDGLGAEIIGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNDEHAWNDHWIF 259
BLAST of CF832939 vs. ExPASy Swiss-Prot
Match: PIP13_ORYSJ (Aquaporin PIP 1-3 OS=Oryza sativa subsp. japonica GN=PIP1-3 PE=2 SV=2) HSP 1 Score: 246.899 bits (629), Expect = 3.507e-65 Identity = 118/161 (73.29%), Postives = 134/161 (83.23%), Query Frame = 3 Query: 3 IFVLFYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVGLAAEIIGTFVLVYTVFSATDPKRSSRDSHVPVLAPLPIGFAEYMVHLATIPITGTGINPAKSLRAAVIYNKDMAWDDPWLF 485 IF L YCTAGISGGHINPAVTFGLFLARK+SL RAV YM QCLGAI G G+VK FQ+ Y GGGAN + GY+ G GL AEI+GTFVLVYTVFSATD KR++RDSHVP+LAPLPIGFA ++VHLATIPITGTGINPA+SL AA++YN+ AW D W+F Sbjct: 100 IFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYMAMQCLGAICGAGVVKGFQRGLYMGSGGGANAVNPGYTKGDGLGAEIVGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIVYNRAHAWHDHWIF 260
BLAST of CF832939 vs. ExPASy Swiss-Prot
Match: PIP27_ORYSJ (Probable aquaporin PIP2-7 OS=Oryza sativa subsp. japonica GN=PIP2-7 PE=2 SV=2) HSP 1 Score: 239.965 bits (611), Expect = 4.287e-63 Identity = 113/161 (70.19%), Postives = 132/161 (81.99%), Query Frame = 3 Query: 3 IFVLFYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVGLAAEIIGTFVLVYTVFSATDPKRSSRDSHVPVLAPLPIGFAEYMVHLATIPITGTGINPAKSLRAAVIYNKDMAWDDPWLF 485 IFVL YCT G+SGGHINPAVT GLF RK+SLVR V+Y+VAQCLGAI+G G+VK K Y GGGAN ++DGYS L AEI+GTF+LVYTVFSATDPKR++RDS +PVL PLPIGFA ++VHLATIPITGTGINPA+SL AAV+YN+ AW D W+F Sbjct: 93 IFVLVYCTGGVSGGHINPAVTLGLFFGRKLSLVRTVLYVVAQCLGAIAGAGIVKGIMKRPYDALGGGANTVSDGYSAAGALGAEIVGTFILVYTVFSATDPKRTARDSFIPVLVPLPIGFAVFVVHLATIPITGTGINPARSLGAAVLYNQHAAWKDHWIF 253
BLAST of CF832939 vs. ExPASy Swiss-Prot
Match: PIP2_PEA (Probable aquaporin PIP-type 7a OS=Pisum sativum GN=TRG-31 PE=2 SV=2) HSP 1 Score: 238.039 bits (606), Expect = 1.629e-62 Identity = 115/162 (70.99%), Postives = 135/162 (83.33%), Query Frame = 3 Query: 3 IFVLFYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQ-KSYYTRYGGGANELADGYSTGVGLAAEIIGTFVLVYTVFSATDPKRSSRDSHVPVLAPLPIGFAEYMVHLATIPITGTGINPAKSLRAAVIYNKDMAWDDPWLF 485 IF L YCTAGISGGHINPAVTFGLFLARK+SL RA+ YMV Q LGAI G G+VK F+ K + GGAN +A GY+ G GL AEI+GTF+LVYTVFSATD KRS+RDSHVP+LAPLPIGFA ++VHLATIPITGTGINPA+SL AA+++NK + W+D W+F Sbjct: 101 IFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAIFYMVMQVLGAICGAGVVKGFEGKQRFGDLNGGANFVAPGYTKGDGLGAEIVGTFILVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIVFNKKIGWNDHWIF 262
BLAST of CF832939 vs. ExPASy Swiss-Prot
Match: PIP16_MAIZE (Aquaporin PIP1-6 OS=Zea mays GN=PIP1-6 PE=2 SV=1) HSP 1 Score: 235.728 bits (600), Expect = 8.086e-62 Identity = 112/161 (69.57%), Postives = 131/161 (81.37%), Query Frame = 3 Query: 3 IFVLFYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVGLAAEIIGTFVLVYTVFSATDPKRSSRDSHVPVLAPLPIGFAEYMVHLATIPITGTGINPAKSLRAAVIYNKDMAWDDPWLF 485 IF L YCTAG+SGGHINPAVTFGL LARK+SL RAV Y+V QCLGA+ G G+VKAF + Y GGGAN ++ GY+ G GL AE++GTFVLVYTVFSATD KR++RDSHVP LAPLPIGFA ++VHLATIPITGTGINPA+SL AA+IY+ W W+F Sbjct: 106 IFALVYCTAGVSGGHINPAVTFGLLLARKLSLTRAVYYVVMQCLGAVCGAGVVKAFGSALYESAGGGANAVSPGYTKGDGLGAEVVGTFVLVYTVFSATDAKRTARDSHVPALAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYDNPHGWHGHWIF 266
BLAST of CF832939 vs. ExPASy Swiss-Prot
Match: PIP11_MAIZE (Aquaporin PIP1-1 OS=Zea mays GN=PIP1-1 PE=1 SV=1) HSP 1 Score: 227.254 bits (578), Expect = 2.876e-59 Identity = 113/161 (70.19%), Postives = 130/161 (80.75%), Query Frame = 3 Query: 3 IFVLFYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVGLAAEIIGTFVLVYTVFSATDPKRSSRDSHVPVLAPLPIGFAEYMVHLATIPITGTGINPAKSLRAAVIYNKDMAWDDPWLF 485 I L YCTAGISG HINPAVTFGLFLARK+SL RAV Y++ QCLGAI G G+VK FQ+ Y GG N +A GY+ G GL AEI+GTF+LVYTVFSATD KR +RDSHVP+LAPLPIGFA ++VHLAT+ ITGTGINPA+SL AAVIYN+ AW D W+F Sbjct: 100 ILALVYCTAGISG-HINPAVTFGLFLARKLSLTRAVFYIIMQCLGAICGRGVVKGFQQGLYMGNGGRRNVVAPGYTKGDGLGAEIVGTFILVYTVFSATDAKRRARDSHVPILAPLPIGFAVFLVHLATMGITGTGINPARSLGAAVIYNQHHAWADHWIF 259
BLAST of CF832939 vs. ExPASy Swiss-Prot
Match: PIP28_ORYSJ (Probable aquaporin PIP2-8 OS=Oryza sativa subsp. japonica GN=PIP2-8 PE=2 SV=1) HSP 1 Score: 221.09 bits (562), Expect = 2.061e-57 Identity = 110/164 (67.07%), Postives = 128/164 (78.05%), Query Frame = 3 Query: 3 IFVLFYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKS-YYTRYGGGANELADGYSTGVGLAAEIIGTFVLVYTVFSATDPKRSSRDSHVPVLAPLPIGFAEYMVHLATIPITGTGINPAKSLRAAVI--YNKDMAWDDPWLF 485 IFVL YCTAGISGGH+NPAVTF + LAR+VSL RA +Y +AQC+GA+ G GL +A Y R+GGGANELA GYS G G+ AE++GTFVLVYTVFSATDPKR +RDSHVPVLAPLPIG A +VHLATIPITGTGINPA+SL A++ AW W+F Sbjct: 80 IFVLVYCTAGISGGHMNPAVTFAMVLARRVSLPRAALYTMAQCVGAVCGAGLARAMHGGGQYARHGGGANELAAGYSAGAGVVAEMVGTFVLVYTVFSATDPKRKARDSHVPVLAPLPIGLAVLVVHLATIPITGTGINPARSLGPALVLGLGTTKAWSHLWIF 243 The following BLAST results are available for this feature:
BLAST of CF832939 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 150
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Sequences
The
following sequences are available for this feature:
EST sequence >CF832939 ID=CF832939; Name=CF832939; organism=Citrus sinensis; type=EST; length=486bpback to top |