CF832939
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF832939 vs. ExPASy Swiss-Prot
Match: AQP4_DIPME (Aquaporin-4 OS=Dipodomys merriami GN=AQP4 PE=2 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 1.262e-22 Identity = 61/161 (37.89%), Postives = 87/161 (54.04%), Query Frame = 3 Query: 3 IFVLFYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVGLAAEIIGTFVLVYTVFSATDPKRSSRDSHVPVLAPLPIGFAEYMVHLATIPITGTGINPAKSLRAAVIYNKDMAWDDPWLF 485 I + C ISGGHINPAVT + RK+S+ ++V Y+ AQCLGAI G G++ G G + + G GL E+I TF LV+T+F++ D KR+ + L IGF+ + HL I TG +NPA+S AVI W++ W++ Sbjct: 81 IATMVQCFGHISGGHINPAVTVAMVCTRKISIAKSVFYIAAQCLGAIIGAGILYLVTPPSVVG-GLGVTTVHGNLTAGHGLLVELIITFQLVFTIFASCDSKRTDVTGSI----ALAIGFSVAIGHLFAINYTGASMNPARSFGPAVIMGN---WENHWIY 233
BLAST of CF832939 vs. ExPASy Swiss-Prot
Match: AQP4_MOUSE (Aquaporin-4 OS=Mus musculus GN=Aqp4 PE=2 SV=2) HSP 1 Score: 105.145 bits (261), Expect = 1.648e-22 Identity = 61/161 (37.89%), Postives = 87/161 (54.04%), Query Frame = 3 Query: 3 IFVLFYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVGLAAEIIGTFVLVYTVFSATDPKRSSRDSHVPVLAPLPIGFAEYMVHLATIPITGTGINPAKSLRAAVIYNKDMAWDDPWLF 485 I + C ISGGHINPAVT + RK+S+ ++V Y++AQCLGAI G G++ G G + + G GL E+I TF LV+T+F++ D KR+ + L IGF+ + HL I TG +NPA+S AVI W + W++ Sbjct: 81 IATMVQCFGHISGGHINPAVTVAMVCTRKISIAKSVFYIIAQCLGAIIGAGILYLVTPPSVVG-GLGVTTVHGNLTAGHGLLVELIITFQLVFTIFASCDSKRTDVTGSI----ALAIGFSVAIGHLFAINYTGASMNPARSFGPAVIMGN---WANHWIY 233
BLAST of CF832939 vs. ExPASy Swiss-Prot
Match: AQP4_HUMAN (Aquaporin-4 OS=Homo sapiens GN=AQP4 PE=1 SV=2) HSP 1 Score: 105.145 bits (261), Expect = 1.648e-22 Identity = 61/161 (37.89%), Postives = 87/161 (54.04%), Query Frame = 3 Query: 3 IFVLFYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVGLAAEIIGTFVLVYTVFSATDPKRSSRDSHVPVLAPLPIGFAEYMVHLATIPITGTGINPAKSLRAAVIYNKDMAWDDPWLF 485 I + C ISGGHINPAVT + RK+S+ ++V Y+ AQCLGAI G G++ G G + + G GL E+I TF LV+T+F++ D KR+ + L IGF+ + HL I TG +NPA+S AVI W++ W++ Sbjct: 81 IATMVQCFGHISGGHINPAVTVAMVCTRKISIAKSVFYIAAQCLGAIIGAGILYLVTPPSVVG-GLGVTMVHGNLTAGHGLLVELIITFQLVFTIFASCDSKRTDVTGSI----ALAIGFSVAIGHLFAINYTGASMNPARSFGPAVIMGN---WENHWIY 233
BLAST of CF832939 vs. ExPASy Swiss-Prot
Match: AQP4_BOVIN (Aquaporin-4 OS=Bos taurus GN=AQP4 PE=2 SV=3) HSP 1 Score: 103.219 bits (256), Expect = 6.263e-22 Identity = 60/161 (37.27%), Postives = 86/161 (53.42%), Query Frame = 3 Query: 3 IFVLFYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVGLAAEIIGTFVLVYTVFSATDPKRSSRDSHVPVLAPLPIGFAEYMVHLATIPITGTGINPAKSLRAAVIYNKDMAWDDPWLF 485 I + C ISGGHINPAVT + R++S+ ++V Y+ AQCLGAI G G++ G G + S G GL E+I TF LV+T+F++ D KR+ + L IG + + HL I TG +NPA+S AVI W++ W++ Sbjct: 81 IATMVQCFGHISGGHINPAVTVAMVCTRRISIAKSVFYIAAQCLGAIIGAGILYLVTPPSVVG-GLGVTTVHGNLSAGHGLLVELIITFQLVFTIFASCDSKRTDVTGSI----ALAIGISVAIGHLFAINYTGASMNPARSFGPAVIMGN---WENHWIY 233
BLAST of CF832939 vs. ExPASy Swiss-Prot
Match: AQP_ANOGA (Aquaporin AQPAn.G OS=Anopheles gambiae GN=AGAP008842 PE=3 SV=4) HSP 1 Score: 102.064 bits (253), Expect = 1.395e-21 Identity = 60/151 (39.74%), Postives = 85/151 (56.29%), Query Frame = 3 Query: 33 ISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVGLAAEIIGTFVLVYTVFSATDPKRSSRDSHVPVLAPLPIGFAEYMVHLATIPITGTGINPAKSLRAAVIYNKDMAWDDPWLF 485 +SG HINPAVT GL + VS+++ Y+V+QC+GAI+G ++KA S G G +A G STG G+ E + TF+LV+ V D +R+ V APL IG + HLA I TG +NPA+S AV+ + D W++ Sbjct: 75 VSGCHINPAVTIGLIVTADVSILKGAFYIVSQCIGAIAGAAVIKAATPSEVVG-GLGVTGIAPGLSTGQGVLIEALITFMLVFVVHGVCDNRRTD----VKGSAPLAIGLSITAGHLAAIKYTGASMNPARSFGPAVVMGN---YTDLWVY 217
BLAST of CF832939 vs. ExPASy Swiss-Prot
Match: AQPA_RANES (Aquaporin FA-CHIP OS=Rana esculenta GN=AQPA PE=2 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 2.380e-21 Identity = 60/151 (39.74%), Postives = 86/151 (56.95%), Query Frame = 3 Query: 33 ISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVGLAAEIIGTFVLVYTVFSATDPKRSSRDSHVPVLAPLPIGFAEYMVHLATIPITGTGINPAKSLRAAVIYNKDMAWDDPWLF 485 +SG H+NPAVT G L+ ++S+++AVMY++AQCLGA+ ++ S G N L+ G S G GL EI+ TF LV V + TD +R V PL IG + + HL I TG G+NPA+S +AV+ K+ + W+F Sbjct: 74 VSGAHLNPAVTLGCLLSCQISILKAVMYIIAQCLGAVVATAILSGI-TSGLENNSLGLNGLSPGVSAGQGLGVEILVTFQLVLCVVAVTDRRRHDVSGSV----PLAIGLSVALGHLIAIDYTGCGMNPARSFGSAVL-TKNFTYH--WIF 216
BLAST of CF832939 vs. ExPASy Swiss-Prot
Match: TIP1_MEDTR (Probable aquaporin TIP-type OS=Medicago truncatula GN=AQP1 PE=1 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 3.108e-21 Identity = 60/162 (37.04%), Postives = 90/162 (55.56%), Query Frame = 3 Query: 3 IFVLFYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVGLAAEIIGTFVLVYTVF-SATDPKRSSRDSHVPVLAPLPIGFAEYMVHLATIPITGTGINPAKSLRAAVIYNKDMAWDDPWLF 485 +FV A ISGGH+NPAVTFG F+ ++L+R ++Y++AQ LG+I L+ S +G L++G G L EI+ TF LVYTV+ +A DPK+ ++ ++AP+ IGF L TG +NPA S AV+ +W + W++ Sbjct: 69 LFVAVSVGANISGGHVNPAVTFGAFVGGNITLLRGIVYIIAQLLGSIVASALLVFVTASSVPAFG-----LSEGVGVGPALVLEIVMTFGLVYTVYATAVDPKK----GNIGIIAPIAIGFIVGANILVGGAFTGASMNPAVSFGPAVV---SWSWSNHWVY 218
BLAST of CF832939 vs. ExPASy Swiss-Prot
Match: TIP12_ORYSJ (Probable aquaporin TIP1-2 OS=Oryza sativa subsp. japonica GN=TIP1-2 PE=2 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 2.015e-20 Identity = 68/166 (40.96%), Postives = 90/166 (54.22%), Query Frame = 3 Query: 3 IFVLFYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVG----LAAEIIGTFVLVYTVF-SATDPKRSSRDSHVPVLAPLPIGFAEYMVHLATIPITGTGINPAKSLRAAVIYNKDMAWDDPWLF 485 +FV A ISGGH+NPAVTFG F+ +SLV+AV+Y VAQ LG++ L+K GGA A S GVG + EI+ TF LVYTV+ +A DPK+ + V+AP+ IGF LA G +NPA S AV+ WD+ W++ Sbjct: 69 LFVAVAVGANISGGHVNPAVTFGAFVGGNISLVKAVVYWVAQLLGSVVACLLLKIAT--------GGAAVGAFSLSAGVGAWNAVVFEIVMTFGLVYTVYATAVDPKKGD----LGVIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPAVVTG---VWDNHWVY 219
BLAST of CF832939 vs. ExPASy Swiss-Prot
Match: AQP_AEDAE (Aquaporin AQPAe.a OS=Aedes aegypti GN=AAEL003512 PE=2 SV=2) HSP 1 Score: 98.2117 bits (243), Expect = 2.015e-20 Identity = 56/151 (37.09%), Postives = 82/151 (54.30%), Query Frame = 3 Query: 33 ISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVGLAAEIIGTFVLVYTVFSATDPKRSSRDSHVPVLAPLPIGFAEYMVHLATIPITGTGINPAKSLRAAVIYNKDMAWDDPWLF 485 +SG HINPAVT GL + +S+++ Y+V+QC+GAI+G L+KA S G G + + G G+ E + TF+LV+ V D +RS + APL IG + HL+ I TG +NPA+S AV+ W D W++ Sbjct: 76 VSGCHINPAVTIGLMITADISILKGAFYIVSQCVGAIAGAALIKAATPSDVIG-GLGVTGIDPRLTAGQGVMIEALITFILVFVVHGVCDNRRSD----IKGSAPLAIGLSITAGHLSAIKYTGASMNPARSFGPAVVMGN---WTDQWVY 218
BLAST of CF832939 vs. ExPASy Swiss-Prot
Match: AQP5_SHEEP (Aquaporin-5 OS=Ovis aries GN=AQP5 PE=2 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 4.489e-20 Identity = 58/142 (40.85%), Postives = 84/142 (59.15%), Query Frame = 3 Query: 33 ISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVGLAAEIIGTFVLVYTVFSATDPKRSSRDSHVPVLAP-LPIGFAEYMVHLATIPITGTGINPAKSLRAAVIYNK 455 +SGGH+NPA+T L + ++SL+RAV Y+VAQ +GAI+G ++ Y R N L + + G + AE+I TF L VFS+TD +R+S PV +P L IG + + HL I TG +NPA+S AVI ++ Sbjct: 63 VSGGHMNPAITLALLVGNQISLLRAVFYLVAQLVGAIAGAAILYGL-APYNARSNLAVNALNNNTTAGQAVVAEMILTFQLALCVFSSTDSRRTS-----PVGSPALSIGLSVTLGHLVGIYFTGCSMNPARSFGPAVIMSR 198 The following BLAST results are available for this feature:
BLAST of CF832939 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 150
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Sequences
The
following sequences are available for this feature:
EST sequence >CF832939 ID=CF832939; Name=CF832939; organism=Citrus sinensis; type=EST; length=486bpback to top |