CF832952

Overview
NameCF832952
Unique NameCF832952
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length637
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF832952 vs. ExPASy Swiss-Prot
Match: PGK_PROMP (Phosphoglycerate kinase OS=Prochlorococcus marinus subsp. pastoris (strain CCMP1986 / MED4) GN=pgk PE=3 SV=1)

HSP 1 Score: 196.052 bits (497), Expect = 1.318e-49
Identity = 103/143 (72.03%), Postives = 114/143 (79.72%), Query Frame = 1
Query:    1 SKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSG-KGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDDA 426
            +KGV LLLP+DV++A++F+ DA SKV    AI   WMGLD+GP +IK F  AL   KTIIWNGPMGVFEFDKFA GT AIA  LA+LS    V TIIGGGDSVAAVEK GLA+KMSHISTGGGASLELLEGKTLPGV AL DA
Sbjct:  260 NKGVELLLPSDVLLANEFSPDAESKVSQIDAISGDWMGLDIGPQSIKVFQNALAECKTIIWNGPMGVFEFDKFAEGTNAIATTLADLSSFSEVCTIIGGGDSVAAVEKAGLAEKMSHISTGGGASLELLEGKTLPGVAALKDA 402          
BLAST of CF832952 vs. ExPASy Swiss-Prot
Match: PGK_PROM5 (Phosphoglycerate kinase OS=Prochlorococcus marinus (strain MIT 9515) GN=pgk PE=3 SV=1)

HSP 1 Score: 187.963 bits (476), Expect = 3.588e-47
Identity = 98/142 (69.01%), Postives = 112/142 (78.87%), Query Frame = 1
Query:    1 SKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSG-KGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 423
            +KGV LLLP+DVV+A++F+  A SKV    +I   WMGLD+GP +IK F  AL   KTIIWNGPMGVFEFDKFA GT +IA  LA+LS    V TIIGGGDSVAAVEK GLA+KMSHISTGGGASLELLEGK LPGV AL++
Sbjct:  260 TKGVELLLPSDVVLANEFSPTAESKVSQIDSISGDWMGLDIGPQSIKVFQNALAECKTIIWNGPMGVFEFDKFAEGTNSIATTLADLSSFSEVCTIIGGGDSVAAVEKAGLAEKMSHISTGGGASLELLEGKNLPGVAALNE 401          
BLAST of CF832952 vs. ExPASy Swiss-Prot
Match: PGK_DEIRA (Phosphoglycerate kinase OS=Deinococcus radiodurans GN=pgk PE=3 SV=1)

HSP 1 Score: 187.578 bits (475), Expect = 4.686e-47
Identity = 90/137 (65.69%), Postives = 109/137 (79.56%), Query Frame = 1
Query:    7 GVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLAL 417
            G  LLLPTD V ADKFAADA SKVVPA  IPDGWMGLD+GPD  +++++AL   KT+ WNGPMGVFEFD+FAAGT A+A  +  L  +   T++GGGDSV+A+ K G AD++ HISTGGGASLELLEGK LPGV+A+
Sbjct:  275 GDKLLLPTDAVAADKFAADAQSKVVPADQIPDGWMGLDIGPDTQRAYADALQGAKTVFWNGPMGVFEFDQFAAGTNAVAAAVGSLKDQAY-TVVGGGDSVSAINKSGKADQIDHISTGGGASLELLEGKELPGVVAM 410          
BLAST of CF832952 vs. ExPASy Swiss-Prot
Match: PGK_CHLAD (Phosphoglycerate kinase OS=Chloroflexus aggregans (strain MD-66 / DSM 9485) GN=pgk PE=3 SV=1)

HSP 1 Score: 187.193 bits (474), Expect = 6.121e-47
Identity = 90/141 (63.83%), Postives = 110/141 (78.01%), Query Frame = 1
Query:    4 KGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDDA 426
            +G  LLLP DVVIAD F+A+A  +VV  TAIP GW  LD+GP  I+ +S  + + +T+IWNGPMGVFE + FAAGT AIA+ +AE S  G  TI+GGGDSVAAVE+ GLA+KM+H+STGGGASLELLEG+ LPGV AL DA
Sbjct:  259 RGARLLLPVDVVIADAFSAEAQRQVVEVTAIPSGWRVLDIGPKTIELYSAEIRSARTVIWNGPMGVFELEPFAAGTRAIAQAMAEASANGAITIVGGGDSVAAVEQAGLAEKMAHVSTGGGASLELLEGRVLPGVAALQDA 399          
BLAST of CF832952 vs. ExPASy Swiss-Prot
Match: PGK_ROSCS (Phosphoglycerate kinase OS=Roseiflexus castenholzii (strain DSM 13941 / HLO8) GN=pgk PE=3 SV=1)

HSP 1 Score: 184.882 bits (468), Expect = 3.038e-46
Identity = 91/141 (64.54%), Postives = 111/141 (78.72%), Query Frame = 1
Query:    4 KGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDDA 426
            +GV L+LPTDVVIAD F+ADAN KVVP   IP GW  LD+GP+ I++++E +   +T+IWNGPMGVFE   FA GT AIA+ +A   G    TIIGGGDSVAA+E++GLADK+ HISTGGGASLELLEG+ LPGV AL+DA
Sbjct:  258 RGVRLMLPTDVVIADAFSADANRKVVPVGEIPPGWRALDIGPETIRAYTEVITGAQTVIWNGPMGVFELAPFAEGTRAIAQAMANCPG---MTIIGGGDSVAAIEQMGLADKIRHISTGGGASLELLEGRILPGVAALNDA 395          
BLAST of CF832952 vs. ExPASy Swiss-Prot
Match: PGK_CHLSY (Phosphoglycerate kinase OS=Chloroflexus aurantiacus (strain ATCC 29364 / DSM 637 / Y-400-fl) GN=pgk PE=3 SV=1)

HSP 1 Score: 184.111 bits (466), Expect = 5.181e-46
Identity = 89/141 (63.12%), Postives = 107/141 (75.89%), Query Frame = 1
Query:    4 KGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDDA 426
            +G  LLLP DVVIAD F+ADA  +VV  + IP GW  LD+GP  I+ +S  +   +T+IWNGPMGVFE + FA GT AIA+ +AE +  G  TI+GGGDSVAAVE+ GLADKMSH+STGGGASLELLEG+ LPGV AL DA
Sbjct:  259 RGARLLLPVDVVIADAFSADAQRQVVDVSDIPAGWRVLDIGPKTIERYSAEIRAARTVIWNGPMGVFELEPFAVGTRAIAQAMAEAAANGAITIVGGGDSVAAVEQAGLADKMSHVSTGGGASLELLEGRVLPGVAALQDA 399          
BLAST of CF832952 vs. ExPASy Swiss-Prot
Match: PGK_CHLAA (Phosphoglycerate kinase OS=Chloroflexus aurantiacus (strain ATCC 29366 / DSM 635 / J-10-fl) GN=pgk PE=3 SV=1)

HSP 1 Score: 184.111 bits (466), Expect = 5.181e-46
Identity = 89/141 (63.12%), Postives = 107/141 (75.89%), Query Frame = 1
Query:    4 KGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDDA 426
            +G  LLLP DVVIAD F+ADA  +VV  + IP GW  LD+GP  I+ +S  +   +T+IWNGPMGVFE + FA GT AIA+ +AE +  G  TI+GGGDSVAAVE+ GLADKMSH+STGGGASLELLEG+ LPGV AL DA
Sbjct:  259 RGARLLLPVDVVIADAFSADAQRQVVDVSDIPAGWRVLDIGPKTIERYSAEIRAARTVIWNGPMGVFELEPFAVGTRAIAQAMAEAAANGAITIVGGGDSVAAVEQAGLADKMSHVSTGGGASLELLEGRVLPGVAALQDA 399          
BLAST of CF832952 vs. ExPASy Swiss-Prot
Match: PGK_HERA2 (Phosphoglycerate kinase OS=Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785) GN=pgk PE=3 SV=1)

HSP 1 Score: 182.185 bits (461), Expect = 1.969e-45
Identity = 87/140 (62.14%), Postives = 114/140 (81.43%), Query Frame = 1
Query:    4 KGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 423
            +GV LLLP+DVV+AD F+A+AN++V+    +PDGW  LD+GP+  +++S+ +   KT+IWNGPMGVFE + FAAGT A+A+ LA+ S     TIIGGGDSVAA+E++GLA+KMSHISTGGGASLELLEGK LPG+ AL+D
Sbjct:  257 RGVKLLLPSDVVVADAFSAEANTQVLSIDDVPDGWRILDIGPETRQTYSQVVSEAKTVIWNGPMGVFELEPFAAGTRAVAQALADSS---AITIIGGGDSVAAIEQMGLAEKMSHISTGGGASLELLEGKVLPGIAALND 393          
BLAST of CF832952 vs. ExPASy Swiss-Prot
Match: PGK_ROSS1 (Phosphoglycerate kinase OS=Roseiflexus sp. (strain RS-1) GN=pgk PE=3 SV=1)

HSP 1 Score: 181.03 bits (458), Expect = 4.386e-45
Identity = 89/142 (62.68%), Postives = 111/142 (78.17%), Query Frame = 1
Query:    1 SKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDDA 426
            S+GV  +LPTDVVIAD F+ADAN +VV    IP GW  LD+GP+ +++++E + T +T+IWNGPMGVFE   FA GT AIA+ +A   G    TI+GGGDSVAAVE++GLADK+ HISTGGGASLELLEG+ LPGV AL+DA
Sbjct:  257 SRGVRFMLPTDVVIADAFSADANRRVVSVGDIPPGWRVLDIGPETVRAYTEIITTAQTVIWNGPMGVFELAPFAEGTRAIAQAMANCPG---MTIVGGGDSVAAVEQMGLADKIRHISTGGGASLELLEGRILPGVAALNDA 395          
BLAST of CF832952 vs. ExPASy Swiss-Prot
Match: PGK_BREBN (Phosphoglycerate kinase OS=Brevibacillus brevis (strain 47 / JCM 6285 / NBRC 100599) GN=pgk PE=3 SV=1)

HSP 1 Score: 180.259 bits (456), Expect = 7.482e-45
Identity = 86/140 (61.43%), Postives = 107/140 (76.43%), Query Frame = 1
Query:    4 KGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 423
            +GV LL+P DVV+AD+FAADA  +VV   AIP+GWM LD+GP  ++ +   +  +KT++WNGPMGVFE D FA GT  +AK +A  SG   TTIIGGGDSVAAVEK G+A++M+HISTGGGASLE +EGK LPGV  L D
Sbjct:  256 RGVQLLMPVDVVVADRFAADAEKQVVAIDAIPEGWMALDIGPKTVEQYHSVIVDSKTVVWNGPMGVFEMDAFAGGTIGVAKAMAACSG---TTIIGGGDSVAAVEKAGVAEQMTHISTGGGASLEFMEGKELPGVAVLAD 392          
The following BLAST results are available for this feature:
BLAST of CF832952 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
PGK_PROMP1.318e-4972.03Phosphoglycerate kinase OS=Prochlorococcus marinus... [more]
PGK_PROM53.588e-4769.01Phosphoglycerate kinase OS=Prochlorococcus marinus... [more]
PGK_DEIRA4.686e-4765.69Phosphoglycerate kinase OS=Deinococcus radiodurans... [more]
PGK_CHLAD6.121e-4763.83Phosphoglycerate kinase OS=Chloroflexus aggregans ... [more]
PGK_ROSCS3.038e-4664.54Phosphoglycerate kinase OS=Roseiflexus castenholzi... [more]
PGK_CHLSY5.181e-4663.12Phosphoglycerate kinase OS=Chloroflexus aurantiacu... [more]
PGK_CHLAA5.181e-4663.12Phosphoglycerate kinase OS=Chloroflexus aurantiacu... [more]
PGK_HERA21.969e-4562.14Phosphoglycerate kinase OS=Herpetosiphon aurantiac... [more]
PGK_ROSS14.386e-4562.68Phosphoglycerate kinase OS=Roseiflexus sp. (strain... [more]
PGK_BREBN7.482e-4561.43Phosphoglycerate kinase OS=Brevibacillus brevis (s... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_02L16_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa02L16, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832952 ID=CF832952; Name=CF832952; organism=Citrus sinensis; type=EST; length=637bp
TCTAAAGGGGTGTCTCTTCTGCTCCCTACTGATGTTGTTATTGCTGACAA
GTTTGCTGCTGATGCCAACAGCAAGGTGGTGCCAGCAACGGCAATTCCAG
ATGGTTGGATGGGCTTGGATGTTGGACCTGATGCCATCAAGTCATTCAGT
GAAGCTTTGGATACTACTAAAACCATCATCTGGAATGGACCTATGGGTGT
GTTTGAATTTGATAAATTTGCTGCTGGCACTGAGGCAATTGCCAAGAAGC
TTGCGGAGCTCAGCGGGAAGGGAGTGACCACAATCATTGGAGGAGGTGAC
TCAGTTGCAGCCGTAGAGAAGGTTGGTCTGGCTGACAAGATGAGCCATAT
CTCCACTGGAGGTGGAGCCAGCTTAGAGCTCCTTGAGGGCAAAACACTCC
CTGGTGTGCTTGCTCTTGATGATGCTTAAACCCAGTTCCTGGACTTTCCT
TTTTTAAATGTGCCATTTCCAGAGTTGTATGTGTGGCTGGTTGTCAGCCC
AGAGTGGATAAAAGTTAAACTTTATCATTAGAGTTGGTTTTGTAGATGCT
GTAAGAGTAAAAATAAATTCTTTCTCACAGGCATCAATGGTGATGCATTT
TTCTGGATTTGATCCCATTTTGGAACATTGTGATGGT
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