CF832975

Overview
NameCF832975
Unique NameCF832975
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length370
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CF832975 vs. ExPASy Swiss-Prot
Match: METK3_ATRNU (S-adenosylmethionine synthetase 3 OS=Atriplex nummularia GN=SAMS3 PE=1 SV=1)

HSP 1 Score: 244.202 bits (622), Expect = 1.526e-64
Identity = 115/122 (94.26%), Postives = 119/122 (97.54%), Query Frame = 3 
Query:    3 KRPEDIGAGDQGHMFGYATDETPEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNP 368
            +RPE+IGAGDQGHMFGYATDETPE MPLSHVLATKLGARLTEVRKN TC WLRPDGKTQVTVEYYN+NGAMVP+RVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNP
Sbjct:  117 RRPEEIGAGDQGHMFGYATDETPELMPLSHVLATKLGARLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPIRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNP 238
[Close]
BLAST of CF832975 vs. ExPASy Swiss-Prot
Match: METK1_ATRNU (S-adenosylmethionine synthetase 1 OS=Atriplex nummularia GN=SAMS1 PE=1 SV=2)

HSP 1 Score: 244.202 bits (622), Expect = 1.526e-64
Identity = 115/122 (94.26%), Postives = 119/122 (97.54%), Query Frame = 3 
Query:    3 KRPEDIGAGDQGHMFGYATDETPEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNP 368
            +RPE+IGAGDQGHMFGYATDETPE MPLSHVLATKLGARLTEVRKN TC WLRPDGKTQVTVEYYN+NGAMVP+RVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNP
Sbjct:  117 RRPEEIGAGDQGHMFGYATDETPELMPLSHVLATKLGARLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPIRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNP 238
[Close]
BLAST of CF832975 vs. ExPASy Swiss-Prot
Match: METK_BRARP (S-adenosylmethionine synthetase OS=Brassica rapa subsp. pekinensis GN=SAMS PE=2 SV=1)

HSP 1 Score: 243.432 bits (620), Expect = 2.603e-64
Identity = 114/122 (93.44%), Postives = 118/122 (96.72%), Query Frame = 3 
Query:    3 KRPEDIGAGDQGHMFGYATDETPEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNP 368
            KRPEDIGAGDQGHMFGYATDETPE MPLSHVLATK+GA+LTEVRKN TC WLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIA DLKEHVIKP+IPEKYLD+KTIFHLNP
Sbjct:  113 KRPEDIGAGDQGHMFGYATDETPELMPLSHVLATKIGAKLTEVRKNGTCRWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIARDLKEHVIKPIIPEKYLDDKTIFHLNP 234
[Close]
BLAST of CF832975 vs. ExPASy Swiss-Prot
Match: METK5_BRAJU (S-adenosylmethionine synthetase 5 OS=Brassica juncea GN=MSAMS5 PE=2 SV=1)

HSP 1 Score: 243.432 bits (620), Expect = 2.603e-64
Identity = 114/122 (93.44%), Postives = 118/122 (96.72%), Query Frame = 3 
Query:    3 KRPEDIGAGDQGHMFGYATDETPEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNP 368
            KRPEDIGAGDQGHMFGYATDETPE MPLSHVLATK+GA+LTEVRKN TC WLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIA DLKEHVIKP+IPEKYLD+KTIFHLNP
Sbjct:  113 KRPEDIGAGDQGHMFGYATDETPELMPLSHVLATKIGAKLTEVRKNGTCRWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIARDLKEHVIKPIIPEKYLDDKTIFHLNP 234
[Close]
BLAST of CF832975 vs. ExPASy Swiss-Prot
Match: METK_LITCN (S-adenosylmethionine synthetase OS=Litchi chinensis GN=SAMS PE=2 SV=1)

HSP 1 Score: 243.047 bits (619), Expect = 3.399e-64
Identity = 115/122 (94.26%), Postives = 119/122 (97.54%), Query Frame = 3 
Query:    3 KRPEDIGAGDQGHMFGYATDETPEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNP 368
            K+PE+IGAGDQGHMFGYATDETPE MPLSHVLATKLGARLTEVRKN TC+WLRPDGKTQVTVEYYN NGAMVPVRVHTVLISTQHDETVTNDEIAADLK+HVIKPVIPEKYLDEKTIFHLNP
Sbjct:  113 KKPEEIGAGDQGHMFGYATDETPELMPLSHVLATKLGARLTEVRKNGTCAWLRPDGKTQVTVEYYNGNGAMVPVRVHTVLISTQHDETVTNDEIAADLKQHVIKPVIPEKYLDEKTIFHLNP 234
[Close]
BLAST of CF832975 vs. ExPASy Swiss-Prot
Match: METK_GOSHI (S-adenosylmethionine synthetase OS=Gossypium hirsutum GN=SAMS PE=2 SV=1)

HSP 1 Score: 242.662 bits (618), Expect = 4.439e-64
Identity = 115/122 (94.26%), Postives = 118/122 (96.72%), Query Frame = 3 
Query:    3 KRPEDIGAGDQGHMFGYATDETPEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNP 368
            KRPE+IGAGDQGHMFGYATDETPE MPL+HVLAT+LGARLTEVRKN TC WLRPDGKTQVTVEYYND GAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNP
Sbjct:  113 KRPEEIGAGDQGHMFGYATDETPELMPLTHVLATRLGARLTEVRKNGTCPWLRPDGKTQVTVEYYNDKGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNP 234
[Close]
BLAST of CF832975 vs. ExPASy Swiss-Prot
Match: METK2_ELAUM (S-adenosylmethionine synthetase 2 OS=Elaeagnus umbellata GN=SAMS2 PE=2 SV=1)

HSP 1 Score: 242.662 bits (618), Expect = 4.439e-64
Identity = 115/122 (94.26%), Postives = 118/122 (96.72%), Query Frame = 3 
Query:    3 KRPEDIGAGDQGHMFGYATDETPEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNP 368
            KRPE+IGAGDQGHMFGYATDETPE MPLSHVLATKLGARLTEVRK+ TC WLRPDGKTQVTVEYYND GAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPV+PEKYLDEKTIFHLNP
Sbjct:  113 KRPEEIGAGDQGHMFGYATDETPELMPLSHVLATKLGARLTEVRKDGTCPWLRPDGKTQVTVEYYNDKGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVVPEKYLDEKTIFHLNP 234
[Close]
BLAST of CF832975 vs. ExPASy Swiss-Prot
Match: METK2_BRAJU (S-adenosylmethionine synthetase 2 OS=Brassica juncea GN=MSAMS2 PE=2 SV=1)

HSP 1 Score: 242.662 bits (618), Expect = 4.439e-64
Identity = 114/122 (93.44%), Postives = 120/122 (98.36%), Query Frame = 3 
Query:    3 KRPEDIGAGDQGHMFGYATDETPEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNP 368
            K+PE+IGAGDQGHMFGYATDETPE MPLSHVLATKLGA+LTEVRKN TC+WLRPDGKTQVTVEY+N+NGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNP
Sbjct:  113 KKPEEIGAGDQGHMFGYATDETPELMPLSHVLATKLGAKLTEVRKNGTCAWLRPDGKTQVTVEYFNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNP 234
[Close]
BLAST of CF832975 vs. ExPASy Swiss-Prot
Match: METK2_ATRNU (S-adenosylmethionine synthetase 2 OS=Atriplex nummularia GN=SAMS2 PE=1 SV=1)

HSP 1 Score: 242.662 bits (618), Expect = 4.439e-64
Identity = 114/122 (93.44%), Postives = 119/122 (97.54%), Query Frame = 3 
Query:    3 KRPEDIGAGDQGHMFGYATDETPEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNP 368
            +RPE+IGAGDQGHMFGYA+DETPE MPLSHVLATKLGARLTEVRKN TC WLRPDGKTQVTVEYYN+NGAMVP+RVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNP
Sbjct:  117 RRPEEIGAGDQGHMFGYASDETPELMPLSHVLATKLGARLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPIRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNP 238
[Close]
BLAST of CF832975 vs. ExPASy Swiss-Prot
Match: METK2_SOLLC (S-adenosylmethionine synthetase 2 OS=Solanum lycopersicum GN=SAM2 PE=2 SV=1)

HSP 1 Score: 242.276 bits (617), Expect = 5.798e-64
Identity = 115/122 (94.26%), Postives = 118/122 (96.72%), Query Frame = 3 
Query:    3 KRPEDIGAGDQGHMFGYATDETPEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNP 368
            KRPE+IGAGDQGHMFGYATDETPE MPLSHVLATKLGARLTEVRKN TCSWLRPDGKTQVTVEY+NDNGAMVP+RVHTVLISTQHDETVTNDEIA DLKEHVIKPVIPEKYLDE TIFHLNP
Sbjct:  113 KRPEEIGAGDQGHMFGYATDETPELMPLSHVLATKLGARLTEVRKNGTCSWLRPDGKTQVTVEYHNDNGAMVPLRVHTVLISTQHDETVTNDEIARDLKEHVIKPVIPEKYLDENTIFHLNP 234
The following BLAST results are available for this feature:
BLAST of CF832975 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK3_ATRNU1.526e-6494.26S-adenosylmethionine synthetase 3 OS=Atriplex numm... [more]
METK1_ATRNU1.526e-6494.26S-adenosylmethionine synthetase 1 OS=Atriplex numm... [more]
METK_BRARP2.603e-6493.44S-adenosylmethionine synthetase OS=Brassica rapa s... [more]
METK5_BRAJU2.603e-6493.44S-adenosylmethionine synthetase 5 OS=Brassica junc... [more]
METK_LITCN3.399e-6494.26S-adenosylmethionine synthetase OS=Litchi chinensi... [more]
METK_GOSHI4.439e-6494.26S-adenosylmethionine synthetase OS=Gossypium hirsu... [more]
METK2_ELAUM4.439e-6494.26S-adenosylmethionine synthetase 2 OS=Elaeagnus umb... [more]
METK2_BRAJU4.439e-6493.44S-adenosylmethionine synthetase 2 OS=Brassica junc... [more]
METK2_ATRNU4.439e-6493.44S-adenosylmethionine synthetase 2 OS=Atriplex numm... [more]
METK2_SOLLC5.798e-6494.26S-adenosylmethionine synthetase 2 OS=Solanum lycop... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_02M06_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa02M06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832975 ID=CF832975; Name=CF832975; organism=Citrus sinensis; type=EST; length=370bp
CAAAGCGCCCTGAGGACATTGGTGCTGGTGACCAGGGCCATATGTTTGGT
TATGCTACTGATGAGACCCCTGAATTTATGCCTTTGAGCCATGTCCTTGC
CACCAAACTTGGTGCTCGTCTCACGGAGGTTAGGAAGAATAGTACCTGCT
CTTGGCTAAGGCCCGATGGGAAGACCCAGGTCACTGTTGAGTACTACAAT
GACAATGGTGCCATGGTCCCAGTCCGTGTCCACACGGTCCTCATTTCAAC
CCAGCATGATGAGACTGTCACAAATGATGAAATTGCTGCTGACCTTAAGG
AGCACGTCATTAAGCCTGTCATCCCCGAGAAGTACCTTGATGAGAAGACC
ATCTTCCACCTTAATCCATC
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