CF832978

Overview
NameCF832978
Unique NameCF832978
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length828
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF832978 vs. ExPASy Swiss-Prot
Match: CATA_METBF (Catalase OS=Methanosarcina barkeri (strain Fusaro / DSM 804) GN=kat PE=3 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 9.799e-23
Identity = 71/202 (35.15%), Postives = 103/202 (50.99%), Query Frame = -1
Query:  235 KWWLEDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVNAPK-CPHRNNHYDGFMNF-MHRDEEVDYFPSRYDPTRHAERYPIPSDVITGRREKACIEKEN-NFKQPGERYRSWAPD-RQERFLNRWIKALCDPRVTHEVRSIWVSYWSQADRSLGQKLASRLNV 828
            K W     P   +G+LVLN+N  N+FAE E  AF+P  +VPGI  S DKMLQ R+F+Y DT  HRLGPNY ++PVNAPK  P  +   DGFM    +     +Y+P+ +        Y  P   ++G   +      N +F Q G  YR    D  +E  +   +  L   +   ++R    + + +ADR  G ++A  L +
Sbjct:  284 KVWPHGDFPTMKIGKLVLNRNPTNYFAEVEQAAFSPANLVPGIGISPDKMLQGRVFSYHDTHIHRLGPNYNLIPVNAPKYSPENSYQRDGFMRVDANGGSGPNYWPNSFGGPSPDSVYLEPPFGVSGLAARTLYTHPNDDFVQAGNLYRDVMTDYDRENLVGNIVSHLSAAQKRIQLRQ--TALFFKADRDYGSRVAKGLEL 483          
BLAST of CF832978 vs. ExPASy Swiss-Prot
Match: CATA_BACSU (Vegetative catalase OS=Bacillus subtilis GN=katA PE=1 SV=5)

HSP 1 Score: 107.071 bits (266), Expect = 1.280e-22
Identity = 63/199 (31.66%), Postives = 105/199 (52.76%), Query Frame = -1
Query:  235 KWWLEDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVNAPKCPHRNNHYDGFMNF-MHRDEEVDYFPSRYDPTRHAERYPIPSDVITGRREKACIEKENNFKQPGERYRSWAPDRQERFLNRWIKALCDPRVTHEVRSIWVSYWSQADRSLGQKLASRLNV 828
            K W +   PL  VGR+VL++N +N+FAE E   F+PG +VPGI  S DKMLQ R+FAY D  R+R+G N+  LP+N  +    N   DG M F  +    V Y P+ +   + +      +  + G  +    +  +++ Q G+ YR  + D + R +   + A+  P    E++   + ++ +AD   G+++A  L +
Sbjct:  280 KVWSQKDYPLIEVGRMVLDRNPENYFAEVEQATFSPGTLVPGIDVSPDKMLQGRLFAYHDAHRYRVGANHQALPINRARNKVNNYQRDGQMRFDDNGGGSVYYEPNSFGGPKESPEDKQAAYPVQGIADSVSYDHYDHYTQAGDLYRLMSEDERTRLVENIVNAM-KPVEKEEIKLRQIEHFYKADPEYGKRVAEGLGL 477          
BLAST of CF832978 vs. ExPASy Swiss-Prot
Match: CATA_VIBPA (Catalase OS=Vibrio parahaemolyticus GN=VPA0305 PE=3 SV=2)

HSP 1 Score: 106.686 bits (265), Expect = 1.671e-22
Identity = 67/195 (34.36%), Postives = 102/195 (52.31%), Query Frame = -1
Query:  250 KWWLEDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVNAPKCPHRNNHYDGFMNFMH-RDEEVDYFPSRYDPTRHAERYPIPSDVITGRREKACIEKENNFKQPGERYRSW-APDRQERFLNRWIKALCDPRVTHEVRSIWVSYWSQADRSLGQKLA 828
            K WL   +P + VG + LN+  +NFF E E  AF P  ++PGI  S D++LQ R+FAY DTQ +RLG N   LPVN P     N++ +G  N     + +V+Y PSR        ++      + G  ++  I K  +F Q G  YRS    DR +   N  +    +  +  ++++  VSY+ +AD+  G +LA
Sbjct:  298 KVWLN--VPDRKVGTMTLNRLPENFFLETEQSAFAPSNLIPGIEPSEDRLLQGRLFAYADTQLYRLGANLFQLPVNRPLTSVNNHNQNGLSNNAQLSNGDVNYEPSRKLNLAEDNQFKAVETKLVGTVQQKAISKPRDFYQAGVLYRSMNEQDRSDLIAN--LAGDLNKVIDKDIKATMVSYFYRADKEYGSRLA 488          
BLAST of CF832978 vs. ExPASy Swiss-Prot
Match: CATA_PSEAE (Catalase OS=Pseudomonas aeruginosa GN=katA PE=1 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 1.671e-22
Identity = 64/202 (31.68%), Postives = 106/202 (52.48%), Query Frame = -1
Query:  232 KWWLEDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVNAPKCPHRNNHYDGFMNF--MHRDEEVDYFPSRYDPTRHAERYPIPSDVITGRREKACIEKENN-FKQPGERYRSWAPDRQERFLNRWIKALCDPRVTHEVRSIWVSYWSQADRSLGQKLASRLNVR 828
            K W     PL  VG   LN+N DN+FAE E  AF P  VVPGI +S DKMLQ R+F+YGD  R+RLG N+  +PVNA +CPH+  H DG M     +  + V Y P+ ++  +    +  P   + G  +      +++ + QP   +  +  ++++R      + + D  V  +++   +  + + D + G+ +A  L ++
Sbjct:  281 KVWPHGDYPLIEVGFFELNRNPDNYFAEVEQAAFTPANVVPGIGFSPDKMLQGRLFSYGDAHRYRLGVNHHQIPVNAARCPHQVYHRDGGMRVDGNNAHQRVTYEPNSFNQWQEQPDFSEPPLSLEGAADHWNHRVDDDYYSQPAALFHLFTDEQKQRLFANIAEDIRD--VPEQIQRRQIGLFLKVDPAYGKGVADALGLK 480          
BLAST of CF832978 vs. ExPASy Swiss-Prot
Match: CATA_DROME (Catalase OS=Drosophila melanogaster GN=Cat PE=1 SV=2)

HSP 1 Score: 106.301 bits (264), Expect = 2.183e-22
Identity = 55/117 (47.01%), Postives = 75/117 (64.10%), Query Frame = -1
Query:  484 KWWLEDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVNAP-KCPHRNNHYDGFMNFM-HRDEEVDYFPSRYDPTRHAER 828
            K W +   PL PVG++VL++N  N+FAE E +AF+P  +VPG+  S DKML  R+F+Y DT RHRLGPNYL +PVN P K    N   DG MN   ++D   +YFP+ ++  +   R
Sbjct:  299 KVWSQKEYPLIPVGKMVLDRNPKNYFAEVEQIAFSPAHLVPGVEPSPDKMLHGRLFSYSDTHRHRLGPNYLQIPVNCPYKVKIENFQRDGAMNVTDNQDGAPNYFPNSFNGPQECPR 415          
BLAST of CF832978 vs. ExPASy Swiss-Prot
Match: CATE_BACPF (Catalase (Fragment) OS=Bacillus pseudofirmus GN=katE PE=3 SV=2)

HSP 1 Score: 105.916 bits (263), Expect = 2.851e-22
Identity = 48/91 (52.75%), Postives = 67/91 (73.63%), Query Frame = -1
Query:  559 KWWLEDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRL-GPNYLMLPVNAPKCPHRNNHYDGF 828
            K W E+ +P++ +G++ LN+N+DN FAE E +AF+PG VVPGI ++ND +LQ R+F+Y DTQ  RL GPN+  LP+N P CP  NN  DG+
Sbjct:  305 KIWPEEEVPVKIIGKMTLNRNVDNVFAETEQVAFHPGHVVPGIDFTNDPLLQGRLFSYTDTQLIRLGGPNFHELPINRPVCPFHNNQRDGY 395          
BLAST of CF832978 vs. ExPASy Swiss-Prot
Match: CATA_STAHJ (Catalase OS=Staphylococcus haemolyticus (strain JCSC1435) GN=katA PE=3 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 4.863e-22
Identity = 68/212 (32.08%), Postives = 107/212 (50.47%), Query Frame = -1
Query:  235 KWWLEDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVNAPK-------CPHRNNHYDGFMNFMHRDE--EVDYFPS-----RYDPTRHAERYPIPSDVITGRREKACIEKENNFKQPGERYRSWAPDRQERFLNRWIKALCDPRVTHEVRSIWVSYWSQADRSLGQKLASRLNV 828
            K W +   PL  VG   LN+N +N+F + E  AF P  ++PG+ +S DKMLQ R+F+YGD QR+RLG N+  +PVN PK       CP      DG M F+  ++     Y+P+     +  P      +P+  D   G       + +N F+QPG+ +R  + D +ER       A+    V+ +V+   + +  +AD   G+ +A  L +
Sbjct:  282 KVWYKGDYPLIEVGEFELNRNPENYFMDVEQAAFAPTNIIPGLDFSPDKMLQGRLFSYGDAQRYRLGVNHWQIPVNQPKGVGIENMCPFSR---DGQMRFLDGNQGGGPHYYPNNKGVYQSQPEYKKPAFPVDGD---GYEYNQRQDDDNYFEQPGKLFRLQSDDAKERIFTNTANAM--DGVSEDVKHRHIRHCYKADPEYGKGVAKALEI 485          
BLAST of CF832978 vs. ExPASy Swiss-Prot
Match: CATA_CAMJE (Catalase OS=Campylobacter jejuni GN=katA PE=1 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 4.863e-22
Identity = 57/160 (35.62%), Postives = 89/160 (55.62%), Query Frame = -1
Query:  355 KWWLEDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVNAPKCPHRNNHYDGFMNF-MHRDEEVDYFPSRYDPT-RHAERYPIPSDVITGRREKACIEKENNFKQPGERYRSWAPDRQERFLN 828
            K W   ++PL  +G ++LNKN  N+F E E  AF+P  +VPGI +S DKMLQ RIF+Y D QR+R+G NY +LPVN  K      +  G MNF  ++++   Y P+ YD + +  + Y  P  V+ G  ++      + + QP   +     D++ +  +
Sbjct:  277 KIWPHSLVPLMDIGEMILNKNPQNYFNEVEQAAFSPSNIVPGIGFSPDKMLQARIFSYPDAQRYRIGTNYHLLPVNRAKSEVNTYNVAGAMNFDSYKNDAAYYEPNSYDNSPKEDKSYLEPDLVLEGVAQRYAPLDNDFYTQPRALFNLMNDDQKTQLFH 436          
BLAST of CF832978 vs. ExPASy Swiss-Prot
Match: CATA_BOVIN (Catalase OS=Bos taurus GN=CAT PE=1 SV=3)

HSP 1 Score: 104.76 bits (260), Expect = 6.351e-22
Identity = 66/169 (39.05%), Postives = 89/169 (52.66%), Query Frame = -1
Query:  337 KWWLEDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVNAPKCPHR----NNHYDGFMNFM-HRDEEVDYFPSRYDPTRHAERYPIPSDVITGRREKACIEKENNFKQPGERYRSWAPDRQERFLNRWIKAL 828
            K W     PL PVG+LVLN+N  N+FAE E LAF+P  + PGI  S DKMLQ R+FAY DT RHRLGPNYL +PVN   CP+R    N   DG M  M ++    +Y+P+ +    H               + + +E   +F    +R+ S   D   +    ++K L
Sbjct:  301 KVWPHGDYPLIPVGKLVLNRNPVNYFAEVEQLAFDPSNMPPGIEPSPDKMLQGRLFAYPDTHRHRLGPNYLQIPVN---CPYRARVANYQRDGPMCMMDNQGGAPNYYPNSFSAPEH---------------QPSALEHRTHFSGDVQRFNSANDDNVTQVRTFYLKVL 451          
BLAST of CF832978 vs. ExPASy Swiss-Prot
Match: CATA1_CAEEL (Peroxisomal catalase 1 OS=Caenorhabditis elegans GN=ctl-2 PE=2 SV=3)

HSP 1 Score: 104.76 bits (260), Expect = 6.351e-22
Identity = 60/145 (41.38%), Postives = 83/145 (57.24%), Query Frame = -1
Query:  406 KWWLEDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVNAPKCPHR----NNHYDGFMNFMHRDEEVDYFPSRYDPTRHAERYPIPSDVITGRREKACIEKENNFKQP 828
            K W     PL  VG++VLN+N  N+FAE E  AF P  +VPGI +S DKMLQ RIF+Y DT  HRLGPNY+ LPVN   CP+R    N   DG M + ++    ++FP+ ++  +        +   TG  ++     +NN+ QP
Sbjct:  297 KVWPHGDYPLIEVGKMVLNRNPRNYFAEVEQSAFCPAHIVPGIEFSPDKMLQGRIFSYTDTHFHRLGPNYIQLPVN---CPYRSRAHNTQRDGAMAYDNQQHAPNFFPNSFNYGKTRPDVKDTTFPATGDVDRYESGDDNNYDQP 438          
The following BLAST results are available for this feature:
BLAST of CF832978 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 141
Match NameE-valueIdentityDescription
CATA_METBF9.799e-2335.15Catalase OS=Methanosarcina barkeri (strain Fusaro ... [more]
CATA_BACSU1.280e-2231.66Vegetative catalase OS=Bacillus subtilis GN=katA P... [more]
CATA_VIBPA1.671e-2234.36Catalase OS=Vibrio parahaemolyticus GN=VPA0305 PE=... [more]
CATA_PSEAE1.671e-2231.68Catalase OS=Pseudomonas aeruginosa GN=katA PE=1 SV... [more]
CATA_DROME2.183e-2247.01Catalase OS=Drosophila melanogaster GN=Cat PE=1 SV... [more]
CATE_BACPF2.851e-2252.75Catalase (Fragment) OS=Bacillus pseudofirmus GN=ka... [more]
CATA_STAHJ4.863e-2232.08Catalase OS=Staphylococcus haemolyticus (strain JC... [more]
CATA_CAMJE4.863e-2235.63Catalase OS=Campylobacter jejuni GN=katA PE=1 SV=1[more]
CATA_BOVIN6.351e-2239.05Catalase OS=Bos taurus GN=CAT PE=1 SV=3[more]
CATA1_CAEEL6.351e-2241.38Peroxisomal catalase 1 OS=Caenorhabditis elegans G... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_02M08_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa02M08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832978 ID=CF832978; Name=CF832978; organism=Citrus sinensis; type=EST; length=828bp
TTTTTTTTTTTTTTTTTGAACTTCATAAAACAGACATTATTATTAATTGA
AACAACAGGAAAAAGAGTCACATAACATGCCAAGTTTATTTTCTATATTA
CAATATACAACAGCAAACATAGGGATCGAAATTCTTCACATAGCTGCACC
CTTGGTGTTCACTCCTTGCTCACTCTTGGCAAGTCAAAAGCATCCAGTGT
TCCAGTTCAAGTGACACCTTCAAATGCTTGGCCTCACATTGAGACGAGAA
GCTAGCTTCTGACCCAGAGATCTGTCGGCCTGAGACCAGTAAGAGACCCA
TATGCTGCGAACCTCATGGGTGACACGTGGGTCACATAAAGCCTTAATCC
ATCGATTAAGGAACCTCTCTTGCCTGTCTGGGGCCCAGGATCGGTATCTC
TCTCCAGGCTGCTTGAAGTTGTTTTCCTTCTCAATGCAAGCCTTCTCACG
CCTTCCTGTAATTACATCAGAAGGAATGGGATATCTCTCAGCATGACGAG
TAGGATCATACCTCGAAGGAAAGTAATCGACCTCCTCATCCCTGTGCATG
AAATTCATGAAACCATCATAATGATTGTTGCGATGAGGACATTTGGGTGC
ATTAACTGGAAGCATCAAGTAGTTGGGTCCAAGGCGATGCCTCTGGGTAT
CACCATAGGCAAAGATTCGACATTGGAGCATCTTATCATTTGAGTAGTAG
ATCCCAGGAACCACGATACCAGGGTTAAATGCAAGCATTTCATTTTCCGC
AAAGAAATTATCGATGTTCTTGTTCAAGACCAAGCGTCCAACTGGCTGCA
GAGGGATGATGTCCTCAAGCCACCACTT
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