CF833016

Overview
NameCF833016
Unique NameCF833016
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length832
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF833016 vs. ExPASy Swiss-Prot
Match: HSP72_SCHPO (Probable heat shock protein ssa2 OS=Schizosaccharomyces pombe GN=ssa2 PE=1 SV=3)

HSP 1 Score: 262.307 bits (669), Expect = 2.395e-69
Identity = 125/189 (66.14%), Postives = 156/189 (82.54%), Query Frame = -2
Query:  265 KEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKDEIEKMVQEAEKYKSEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLAPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMYQ 831
            K ++FSTYSDNQPGVLIQV+EGER RT+D NLLGKFELSGIPPAPRGVPQI V FD+DANGILNVSA +K TG+  KITITNDKGRLSK+EI++MV EAEKYK+EDE    +++AKN LE+YAY++RN++ D  +  K+  +DK+ ++ A+ + I+WLDSN  A  DEFE K KELES+ NPI+AK+YQ
Sbjct:  422 KSEIFSTYSDNQPGVLIQVFEGERARTKDCNLLGKFELSGIPPAPRGVPQIEVTFDVDANGILNVSALEKGTGKTQKITITNDKGRLSKEEIDRMVAEAEKYKAEDEAESGRIQAKNHLESYAYSLRNSLDDPNLKDKVDASDKETVDKAVKETIEWLDSNTTAAKDEFEAKQKELESVANPIMAKIYQ 610          
BLAST of CF833016 vs. ExPASy Swiss-Prot
Match: HSP72_PARBA (Heat shock 70 kDa protein 2 OS=Paracoccidioides brasiliensis (strain ATCC MYA-826 / Pb01) GN=HSP70-2 PE=2 SV=2)

HSP 1 Score: 262.307 bits (669), Expect = 2.395e-69
Identity = 122/188 (64.89%), Postives = 153/188 (81.38%), Query Frame = -2
Query:  268 KEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKDEIEKMVQEAEKYKSEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLAPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMY 831
            K + FST++DNQPGVLIQV+EGER RT+DNNLLGKFEL+GIPPAPRGVPQI V FD+DANGI+NVSA +K TG+ NKI ITNDKGRLSK+EIE+M+ EAEKYK+EDE    ++ AKN LE+YAY++RNT+ D K+  KL  +DK+K++  ID+ + WLD NQ A  +EFE + KELES+ NPI+ K Y
Sbjct:  423 KSETFSTFADNQPGVLIQVFEGERARTKDNNLLGKFELTGIPPAPRGVPQIEVTFDVDANGIMNVSALEKGTGKTNKIVITNDKGRLSKEEIERMLAEAEKYKAEDEAEASRISAKNGLESYAYSLRNTISDSKVDEKLDASDKEKLKTEIDKTVSWLDENQTATKEEFEAQQKELESVANPIMMKFY 610          
BLAST of CF833016 vs. ExPASy Swiss-Prot
Match: HSP71_SCHPO (Probable heat shock protein ssa1 OS=Schizosaccharomyces pombe GN=ssa1 PE=1 SV=2)

HSP 1 Score: 261.922 bits (668), Expect = 3.128e-69
Identity = 131/223 (58.74%), Postives = 164/223 (73.54%), Query Frame = -2
Query:  178 KEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKDEIEKMVQEAEKYKSEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLAPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMYQXXXXXXXXXXXXXXXXXGSGA-----GPKIEEVD 831
            K +VFSTY+DNQPGVLIQV+EGER RT+D NLLGKFELSGIPPAPRGVPQI V FD+DANGILNVSA +K TG+  KITITNDKGRLSK+EI++MV EAEKYK+EDE    +++AKN LE+YAY++RN++ D  +  K+  +DK+ I+ A+ + I+WLD N  A  DE+EDK KELE + NPI+AK+YQ                 G        GP++EEVD
Sbjct:  422 KSEVFSTYADNQPGVLIQVFEGERARTKDCNLLGKFELSGIPPAPRGVPQIEVTFDVDANGILNVSALEKGTGKTQKITITNDKGRLSKEEIDRMVSEAEKYKAEDEAETSRIQAKNHLESYAYSLRNSLDDPNLKDKVDASDKEAIDKAVKETIEWLDHNTTAAKDEYEDKQKELEGVANPIMAKIYQAGGAPGGAPGGMPGGAPGGAPGGADNGPEVEEVD 644          
BLAST of CF833016 vs. ExPASy Swiss-Prot
Match: HSP70_EMENI (Heat shock 70 kDa protein OS=Emericella nidulans GN=hsp70 PE=1 SV=1)

HSP 1 Score: 260.766 bits (665), Expect = 6.968e-69
Identity = 122/188 (64.89%), Postives = 156/188 (82.98%), Query Frame = -2
Query:  268 KEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKDEIEKMVQEAEKYKSEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLAPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMY 831
            K + FSTYSDNQPGVLIQVYEGER RT+DNNLLGKFEL+GIPPAPRGVPQI V FD+DANGI+NVSA +K TG+ NKITITNDKGRLSK++IE+M+ +AEKYK+EDE    +++AKN LE+YAY+++NT+ + ++  +++  DKKK+ D ID+ I WLD+NQ AE DE+E + KELE + NPII+  Y
Sbjct:  422 KSETFSTYSDNQPGVLIQVYEGERARTKDNNLLGKFELTGIPPAPRGVPQIEVTFDLDANGIMNVSAVEKGTGKTNKITITNDKGRLSKEDIERMLADAEKYKAEDEAEAARIQAKNGLESYAYSLKNTISEGQL--QISEDDKKKVSDKIDEVISWLDNNQTAEKDEYESQQKELEGVANPIISAAY 607          
BLAST of CF833016 vs. ExPASy Swiss-Prot
Match: HSP72_CANAL (Heat shock protein SSA2 OS=Candida albicans GN=SSA2 PE=1 SV=3)

HSP 1 Score: 259.996 bits (663), Expect = 1.189e-68
Identity = 134/224 (59.82%), Postives = 163/224 (72.77%), Query Frame = -2
Query:  178 KEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKDEIEKMVQEAEKYKSEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLAPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMYQXXXXXXXXXXXXXXXXXGSGA------GPKIEEVD 831
            K + FSTY+DNQPGVLIQV+EGER +T+DNNLLGKFELSGIPPAPRGVPQI V FDIDANGILNVSA +K TG+  KITITNDKGRLSK+EIEKMV EAEK+K EDE+   +V+AKN LE+YAY+++NT+ +E+  SKL  ++ +++  A D+ I WLDSNQ A  +EF D+ KELES  NPI+ K YQ                 G  A      GP +EEVD
Sbjct:  422 KSETFSTYADNQPGVLIQVFEGERAQTKDNNLLGKFELSGIPPAPRGVPQIEVTFDIDANGILNVSALEKGTGKTQKITITNDKGRLSKEEIEKMVSEAEKFKEEDEKEASRVQAKNQLESYAYSLKNTLGEEQFKSKLDASEIEEVTKAADETIAWLDSNQTATQEEFADQQKELESKANPIMTKAYQAGATPSGAAGAAPGGFPGGAAPEPSNDGPTVEEVD 645          
BLAST of CF833016 vs. ExPASy Swiss-Prot
Match: HSP70_TRIRU (Heat shock 70 kDa protein OS=Trichophyton rubrum GN=HSP70 PE=2 SV=1)

HSP 1 Score: 259.61 bits (662), Expect = 1.552e-68
Identity = 121/188 (64.36%), Postives = 152/188 (80.85%), Query Frame = -2
Query:  268 KEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKDEIEKMVQEAEKYKSEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLAPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMY 831
            K + FST+SDNQPGVLIQV+EGER RT+DNNLLGKFEL+GIPPAPRGVPQI V FD+DANGI+NVSA +K TG+ NKI ITNDKGRLSK+EIE+M+ EAEKYK+EDE    ++ AKN LE+YAY+++NT+ D K+  KL  ADK+K++  ID+ + WLD NQ A  +E+E + KELE + NPI+ K Y
Sbjct:  423 KSETFSTFSDNQPGVLIQVFEGERARTKDNNLLGKFELTGIPPAPRGVPQIEVTFDVDANGIMNVSALEKGTGKTNKIVITNDKGRLSKEEIERMLAEAEKYKAEDEAETARIGAKNGLESYAYSLKNTLSDSKVDEKLDAADKEKLKSEIDKVVAWLDDNQTATKEEYESQQKELEGVANPIMMKFY 610          
BLAST of CF833016 vs. ExPASy Swiss-Prot
Match: HSP70_LEIDO (Heat shock 70 kDa protein OS=Leishmania donovani GN=HSP70 PE=3 SV=1)

HSP 1 Score: 259.225 bits (661), Expect = 2.027e-68
Identity = 130/228 (57.02%), Postives = 163/228 (71.49%), Query Frame = -2
Query:  178 KEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKDEIEKMVQEAEKYKSEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLAPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMYQ----------XXXXXXXXXXXXXXXXXGSGAGPKIEEVD 831
            K Q+FSTY+DNQPGV IQV+EGER  T+D +LLG F+LSGIPPAPRGVPQI V FD+DANGILNVSAE+K TG++N+ITITNDKGRLSKDEIE+MV +A KY+++D   + +VEAKN LENYAY+M+NT+ D  +  KL  +DK  +   ID  ++WL SNQ A  +E+E K KELES+CNPI+ KMYQ                           G+ +GPK+EEVD
Sbjct:  426 KSQIFSTYADNQPGVHIQVFEGERAMTKDCHLLGTFDLSGIPPAPRGVPQIEVTFDLDANGILNVSAEEKGTGKRNQITITNDKGRLSKDEIERMVNDAMKYEADDRAQRDRVEAKNGLENYAYSMKNTLGDSNVSGKLDDSDKATLNKEIDVTLEWLSSNQEATKEEYEHKQKELESVCNPIMTKMYQSMGGAGGGMPGGMPDMSGMSGGAGPAGGASSGPKVEEVD 653          
BLAST of CF833016 vs. ExPASy Swiss-Prot
Match: HSP73_YEAST (Heat shock protein SSA3 OS=Saccharomyces cerevisiae GN=SSA3 PE=1 SV=3)

HSP 1 Score: 258.84 bits (660), Expect = 2.648e-68
Identity = 121/188 (64.36%), Postives = 152/188 (80.85%), Query Frame = -2
Query:  268 KEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKDEIEKMVQEAEKYKSEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLAPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMY 831
            K + FSTY+DNQPGVLIQV+EGERTRT+DNNLLGKFELSGIPPAPRGVPQI V FDIDANGILNVSA +K TG+ NKITITNDKGRLSKD+I++MV EAEKY+++DE   ++V+AKN LE+YA+ ++NT+ +     K+   D K++E A  + I WLD++Q A  DE++D+ KELE I NPI+ K Y
Sbjct:  422 KSETFSTYADNQPGVLIQVFEGERTRTKDNNLLGKFELSGIPPAPRGVPQIDVTFDIDANGILNVSALEKGTGKSNKITITNDKGRLSKDDIDRMVSEAEKYRADDEREAERVQAKNQLESYAFTLKNTINEASFKEKVGEDDAKRLETASQETIDWLDASQAASTDEYKDRQKELEGIANPIMTKFY 609          
BLAST of CF833016 vs. ExPASy Swiss-Prot
Match: HSP70_BRELC (Heat shock 70 kDa protein OS=Bremia lactucae GN=HSP70 PE=3 SV=1)

HSP 1 Score: 258.84 bits (660), Expect = 2.648e-68
Identity = 123/188 (65.43%), Postives = 151/188 (80.32%), Query Frame = -2
Query:  268 KEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKDEIEKMVQEAEKYKSEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLAPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMY 831
            K Q FSTY+DNQPGVLIQ++EGER+ TRDNNLLGKF L GIPP PRGVPQI V FDIDANGI NVSA +K+TG++NKITITND+    + +I++MV EAEKYKSEDE +K ++EAKN LENY+YN+RNT+ DEK+  ++   DKK IED + + I WLD+NQ AE +E+E K KELE I NPI+ KMY
Sbjct:  427 KSQTFSTYADNQPGVLIQLFEGERSMTRDNNLLGKFNLDGIPPMPRGVPQIDVTFDIDANGIFNVSAVEKSTGKENKITITNDRVVCRRHDIDRMVSEAEKYKSEDEANKIRIEAKNGLENYSYNLRNTLNDEKLKDQIPEDDKKAIEDKVTETINWLDANQSAEKEEYEGKQKELEGIANPILQKMY 614          
BLAST of CF833016 vs. ExPASy Swiss-Prot
Match: HSP70_PLAFA (Heat shock 70 kDa protein OS=Plasmodium falciparum PE=2 SV=2)

HSP 1 Score: 257.684 bits (657), Expect = 5.899e-68
Identity = 120/189 (63.49%), Postives = 157/189 (83.07%), Query Frame = -2
Query:  265 KEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKDEIEKMVQEAEKYKSEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLAPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMYQ 831
            K Q+F+TY+DNQPGVLIQVYEGER  T+DNNLLGKF L GIPPAPR VPQI V FDIDANGILNV+A +K+TG++N ITITNDKGRLS+DEI++MV +AEKYK+EDEE++K++EA+N+LENY Y ++++++D+KI  KL PA+ +     I   ++WL+ NQLA  DE+E K KE ES+C PI++K+YQ
Sbjct:  437 KSQIFTTYADNQPGVLIQVYEGERALTKDNNLLGKFHLDGIPPAPRKVPQIEVTFDIDANGILNVTAVEKSTGKQNHITITNDKGRLSQDEIDRMVNDAEKYKAEDEENRKRIEARNSLENYCYGVKSSLEDQKIKEKLQPAEIETCMKTITTILEWLEKNQLAGKDEYEAKQKEAESVCAPIMSKIYQ 625          
The following BLAST results are available for this feature:
BLAST of CF833016 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
HSP72_SCHPO2.395e-6966.14Probable heat shock protein ssa2 OS=Schizosaccharo... [more]
HSP72_PARBA2.395e-6964.89Heat shock 70 kDa protein 2 OS=Paracoccidioides br... [more]
HSP71_SCHPO3.128e-6958.74Probable heat shock protein ssa1 OS=Schizosaccharo... [more]
HSP70_EMENI6.968e-6964.89Heat shock 70 kDa protein OS=Emericella nidulans G... [more]
HSP72_CANAL1.189e-6859.82Heat shock protein SSA2 OS=Candida albicans GN=SSA... [more]
HSP70_TRIRU1.552e-6864.36Heat shock 70 kDa protein OS=Trichophyton rubrum G... [more]
HSP70_LEIDO2.027e-6857.02Heat shock 70 kDa protein OS=Leishmania donovani G... [more]
HSP73_YEAST2.648e-6864.36Heat shock protein SSA3 OS=Saccharomyces cerevisia... [more]
HSP70_BRELC2.648e-6865.43Heat shock 70 kDa protein OS=Bremia lactucae GN=HS... [more]
HSP70_PLAFA5.899e-6863.49Heat shock 70 kDa protein OS=Plasmodium falciparum... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS02_02N04_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa02N04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF833016 ID=CF833016; Name=CF833016; organism=Citrus sinensis; type=EST; length=832bp
CCTTTTTTTTTTTTAGAGAACACTTGCAATGGGGCTTTTGAACAGACTTG
TAAAACATCAATCAAAACCCAATAATAGTCAAAAGCATGAAAATAAAATT
AAAATTCCGAAACATCTAATCACCCTACCAACTTAACCCTCAACAGACAA
AAGCCAGCAGAAAACGAGAGCTGCTTAGTCTACCTCCTCAATCTTGGGGC
CAGCACCGCTACCACCAGCAGGAACATCGTCATCCATGGCACCACCCATG
TCACCACCGGCACCCTGGTACATCTTTGCAATGATGGGGTTGCAGATGCT
CTCTAATTCCTTCATCTTATCCTCAAACTCATCAGCCTCTGCAAGCTGGT
TGCTGTCCAACCATTGGATGGCCTGGTCGATCGCATCTTCAATCTTCTTC
TTATCCGCTGGTGCAAGCTTGGAACCAATCTTCTCGTCCTTCACTGTGTT
CCTCATGTTGTATGCATAGTTCTCCAAGGCATTCTTTGCCTCAACCTTCT
TCTTGTGCTCTTCATCTTCAGACTTGTATTTCTCCGCCTCTTGAACCATC
TTCTCAATTTCATCCTTTGAAAGTCTTCCTTTGTCATTAGTGATGGTGAT
CTTGTTCTTTTGACCAGTGGTCTTGTCCTCGGCAGACACATTCAGGATAC
CATTGGCATCGATGTCGAAGCACACAGTGATTTGAGGAACACCCCTAGGA
GCTGGGGGAATACCAGAGAGCTCGAATTTACCCAACAAGTTATTGTCCCT
GGTTCTTGTCCTTTCACCTTCATAGACTTGGATCAACACACCAGGTTGGT
TGTCAGAGTAAGTTGAGAAGACCTGCTCCTTC
back to top