CF833026

Overview
NameCF833026
Unique NameCF833026
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length735
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF833026 vs. ExPASy Swiss-Prot
Match: TKT_STAAW (Transketolase OS=Staphylococcus aureus (strain MW2) GN=tkt PE=3 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 3.594e-23
Identity = 55/125 (44.00%), Postives = 78/125 (62.40%), Query Frame = -1
Query:  331 DGVEKGAYIISDNSSGNKPDVILIGTGSXXXXXXXXXXXLRKGGKAVRVVSFVSWELFDEQSDAYKESVLPAAVSARVSIEAGSTFGWEKIVGSKGKAIGIDRFGASAPAGKIYKEFGITAEAVI 705
            +GV KGAY +    S   P+ +L+ +GS           L K GK+VRVVS  +W  F++QS+ YKESV+P++V+ RV+IE  S  GW K VG+ GK I ID FGASAP   + +++G T E ++
Sbjct:  534 EGVRKGAYTVY--GSEETPEFLLLASGSEVSLAVEAAKDLEKQGKSVRVVSMPNWNAFEQQSEEYKESVIPSSVTKRVAIEMASPLGWHKYVGTAGKVIAIDGFGASAPGDLVVEKYGFTKENIL 656          
BLAST of CF833026 vs. ExPASy Swiss-Prot
Match: TKT_STAAS (Transketolase OS=Staphylococcus aureus (strain MSSA476) GN=tkt PE=3 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 3.594e-23
Identity = 55/125 (44.00%), Postives = 78/125 (62.40%), Query Frame = -1
Query:  331 DGVEKGAYIISDNSSGNKPDVILIGTGSXXXXXXXXXXXLRKGGKAVRVVSFVSWELFDEQSDAYKESVLPAAVSARVSIEAGSTFGWEKIVGSKGKAIGIDRFGASAPAGKIYKEFGITAEAVI 705
            +GV KGAY +    S   P+ +L+ +GS           L K GK+VRVVS  +W  F++QS+ YKESV+P++V+ RV+IE  S  GW K VG+ GK I ID FGASAP   + +++G T E ++
Sbjct:  534 EGVRKGAYTVY--GSEETPEFLLLASGSEVSLAVEAAKDLEKQGKSVRVVSMPNWNAFEQQSEEYKESVIPSSVTKRVAIEMASPLGWHKYVGTAGKVIAIDGFGASAPGDLVVEKYGFTKENIL 656          
BLAST of CF833026 vs. ExPASy Swiss-Prot
Match: TKT_STAAR (Transketolase OS=Staphylococcus aureus (strain MRSA252) GN=tkt PE=3 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 3.594e-23
Identity = 55/125 (44.00%), Postives = 78/125 (62.40%), Query Frame = -1
Query:  331 DGVEKGAYIISDNSSGNKPDVILIGTGSXXXXXXXXXXXLRKGGKAVRVVSFVSWELFDEQSDAYKESVLPAAVSARVSIEAGSTFGWEKIVGSKGKAIGIDRFGASAPAGKIYKEFGITAEAVI 705
            +GV KGAY +    S   P+ +L+ +GS           L K GK+VRVVS  +W  F++QS+ YKESV+P++V+ RV+IE  S  GW K VG+ GK I ID FGASAP   + +++G T E ++
Sbjct:  534 EGVRKGAYTVY--GSEETPEFLLLASGSEVSLAVEAAKDLEKQGKSVRVVSMPNWNAFEQQSEEYKESVIPSSVTKRVAIEMASPLGWHKYVGTAGKVIAIDGFGASAPGDLVVEKYGFTKENIL 656          
BLAST of CF833026 vs. ExPASy Swiss-Prot
Match: TKT_STAAN (Transketolase OS=Staphylococcus aureus (strain N315) GN=tkt PE=1 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 3.594e-23
Identity = 55/125 (44.00%), Postives = 78/125 (62.40%), Query Frame = -1
Query:  331 DGVEKGAYIISDNSSGNKPDVILIGTGSXXXXXXXXXXXLRKGGKAVRVVSFVSWELFDEQSDAYKESVLPAAVSARVSIEAGSTFGWEKIVGSKGKAIGIDRFGASAPAGKIYKEFGITAEAVI 705
            +GV KGAY +    S   P+ +L+ +GS           L K GK+VRVVS  +W  F++QS+ YKESV+P++V+ RV+IE  S  GW K VG+ GK I ID FGASAP   + +++G T E ++
Sbjct:  534 EGVRKGAYTVY--GSEETPEFLLLASGSEVSLAVEAAKDLEKQGKSVRVVSMPNWNAFEQQSEEYKESVIPSSVTKRVAIEMASPLGWHKYVGTAGKVIAIDGFGASAPGDLVVEKYGFTKENIL 656          
BLAST of CF833026 vs. ExPASy Swiss-Prot
Match: TKT_STAAM (Transketolase OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=tkt PE=1 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 3.594e-23
Identity = 55/125 (44.00%), Postives = 78/125 (62.40%), Query Frame = -1
Query:  331 DGVEKGAYIISDNSSGNKPDVILIGTGSXXXXXXXXXXXLRKGGKAVRVVSFVSWELFDEQSDAYKESVLPAAVSARVSIEAGSTFGWEKIVGSKGKAIGIDRFGASAPAGKIYKEFGITAEAVI 705
            +GV KGAY +    S   P+ +L+ +GS           L K GK+VRVVS  +W  F++QS+ YKESV+P++V+ RV+IE  S  GW K VG+ GK I ID FGASAP   + +++G T E ++
Sbjct:  534 EGVRKGAYTVY--GSEETPEFLLLASGSEVSLAVEAAKDLEKQGKSVRVVSMPNWNAFEQQSEEYKESVIPSSVTKRVAIEMASPLGWHKYVGTAGKVIAIDGFGASAPGDLVVEKYGFTKENIL 656          
BLAST of CF833026 vs. ExPASy Swiss-Prot
Match: TKT_STAAC (Transketolase OS=Staphylococcus aureus (strain COL) GN=tkt PE=3 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 3.594e-23
Identity = 55/125 (44.00%), Postives = 78/125 (62.40%), Query Frame = -1
Query:  331 DGVEKGAYIISDNSSGNKPDVILIGTGSXXXXXXXXXXXLRKGGKAVRVVSFVSWELFDEQSDAYKESVLPAAVSARVSIEAGSTFGWEKIVGSKGKAIGIDRFGASAPAGKIYKEFGITAEAVI 705
            +GV KGAY +    S   P+ +L+ +GS           L K GK+VRVVS  +W  F++QS+ YKESV+P++V+ RV+IE  S  GW K VG+ GK I ID FGASAP   + +++G T E ++
Sbjct:  534 EGVRKGAYTVY--GSEETPEFLLLASGSEVSLAVEAAKDLEKQGKSVRVVSMPNWNAFEQQSEEYKESVIPSSVTKRVAIEMASPLGWHKYVGTAGKVIAIDGFGASAPGDLVVEKYGFTKENIL 656          
BLAST of CF833026 vs. ExPASy Swiss-Prot
Match: TKT1_VIBVY (Transketolase 1 OS=Vibrio vulnificus (strain YJ016) GN=tkt1 PE=3 SV=2)

HSP 1 Score: 108.612 bits (270), Expect = 3.594e-23
Identity = 60/129 (46.51%), Postives = 80/129 (62.02%), Query Frame = -1
Query:  313 VEKGAYIISDNSSGNKPDVILIGTGSXXXXXXXXXXXLRKGGKAVRVVSFVSWELFDEQSDAYKESVLPAAVSARVSIEAGSTFGWEKIVGSKGKAIGIDRFGASAPAGKIYKEFGITAEAVITAAKEV 699
            + KG YI+ D  S  KP++ILI TGS           L   GK VRVVS  + + FD+Q  AY+ESVLP+ V+AR++IEAG    W K VG  G+ IG+  FG SAPA ++++ FG T E V+  AKE+
Sbjct:  536 IAKGGYILKD--SDGKPELILIATGSEVELAVKAAEQLTAEGKKVRVVSMPATDAFDKQDAAYRESVLPSDVTARIAIEAGIADFWYKYVGFDGRIIGMTTFGESAPADQLFEMFGFTVENVVNTAKEL 662          
BLAST of CF833026 vs. ExPASy Swiss-Prot
Match: TKT_BACSU (Transketolase OS=Bacillus subtilis GN=tkt PE=3 SV=2)

HSP 1 Score: 107.842 bits (268), Expect = 6.130e-23
Identity = 63/141 (44.68%), Postives = 80/141 (56.74%), Query Frame = -1
Query:  319 LPHLAGTS---IDGVEKGAYIISDNSSGNKPDVILIGTGSXXXXXXXXXXXLRKGGKAVRVVSFVSWELFDEQSDAYKESVLPAAVSARVSIEAGSTFGWEKIVGSKGKAIGIDRFGASAPAGKIYKEFGITAEAVITAAK 732
            LP +  TS   + GVEKGAY++S  S    PD +LI +GS           L K    V VVS  S + F++QSD YK  VLPA V  R++IE GS+FGW K  G +G  +GIDRFGASAP   I  E+G +   V+   K
Sbjct:  523 LPTIDQTSEEALAGVEKGAYVVS-KSKNETPDALLIASGSEVGLAIEAQAELAKENIDVSVVSMPSMDRFEKQSDEYKNEVLPADVKKRLAIEMGSSFGWGKYTGLEGDVLGIDRFGASAPGETIINEYGFSVPNVVNRVK 662          
BLAST of CF833026 vs. ExPASy Swiss-Prot
Match: TKT2_VIBVU (Transketolase 2 OS=Vibrio vulnificus GN=tkt2 PE=3 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 8.007e-23
Identity = 59/129 (45.74%), Postives = 80/129 (62.02%), Query Frame = -1
Query:  313 VEKGAYIISDNSSGNKPDVILIGTGSXXXXXXXXXXXLRKGGKAVRVVSFVSWELFDEQSDAYKESVLPAAVSARVSIEAGSTFGWEKIVGSKGKAIGIDRFGASAPAGKIYKEFGITAEAVITAAKEV 699
            + KG YI+ D  S  KP++ILI TGS           L   GK VRVVS  + + FD+Q  AY+E+VLP+ V+AR++IEAG    W K VG  G+ IG+  FG SAPA ++++ FG T E V+  AKE+
Sbjct:  535 IAKGGYILKD--SDGKPELILIATGSEVELAVKAAEQLTAEGKKVRVVSMPATDTFDKQDAAYREAVLPSDVTARIAIEAGIADFWYKYVGFDGRIIGMTTFGESAPADQLFEMFGFTVENVVNTAKEL 661          
BLAST of CF833026 vs. ExPASy Swiss-Prot
Match: TKT1_VIBVU (Transketolase 1 OS=Vibrio vulnificus GN=tkt1 PE=3 SV=2)

HSP 1 Score: 107.457 bits (267), Expect = 8.007e-23
Identity = 59/129 (45.74%), Postives = 80/129 (62.02%), Query Frame = -1
Query:  313 VEKGAYIISDNSSGNKPDVILIGTGSXXXXXXXXXXXLRKGGKAVRVVSFVSWELFDEQSDAYKESVLPAAVSARVSIEAGSTFGWEKIVGSKGKAIGIDRFGASAPAGKIYKEFGITAEAVITAAKEV 699
            + KG YI+ D  S  KP++ILI TGS           L   GK VRVVS  + + FD+Q  AY+E+VLP+ V+AR++IEAG    W K VG  G+ IG+  FG SAPA ++++ FG T E V+  AKE+
Sbjct:  536 IAKGGYILKD--SDGKPELILIATGSEVELAVKAAEQLTAEGKKVRVVSMPATDTFDKQDAAYREAVLPSDVTARIAIEAGIADFWYKYVGFDGRIIGMTTFGESAPADQLFEMFGFTVENVVNTAKEL 662          
The following BLAST results are available for this feature:
BLAST of CF833026 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 57
Match NameE-valueIdentityDescription
TKT_STAAW3.594e-2344.00Transketolase OS=Staphylococcus aureus (strain MW2... [more]
TKT_STAAS3.594e-2344.00Transketolase OS=Staphylococcus aureus (strain MSS... [more]
TKT_STAAR3.594e-2344.00Transketolase OS=Staphylococcus aureus (strain MRS... [more]
TKT_STAAN3.594e-2344.00Transketolase OS=Staphylococcus aureus (strain N31... [more]
TKT_STAAM3.594e-2344.00Transketolase OS=Staphylococcus aureus (strain Mu5... [more]
TKT_STAAC3.594e-2344.00Transketolase OS=Staphylococcus aureus (strain COL... [more]
TKT1_VIBVY3.594e-2346.51Transketolase 1 OS=Vibrio vulnificus (strain YJ016... [more]
TKT_BACSU6.130e-2344.68Transketolase OS=Bacillus subtilis GN=tkt PE=3 SV=... [more]
TKT2_VIBVU8.007e-2345.74Transketolase 2 OS=Vibrio vulnificus GN=tkt2 PE=3 ... [more]
TKT1_VIBVU8.007e-2345.74Transketolase 1 OS=Vibrio vulnificus GN=tkt1 PE=3 ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_02N10_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa02N10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF833026 ID=CF833026; Name=CF833026; organism=Citrus sinensis; type=EST; length=735bp
TTTTTTTTGATCATGGACGAGCAAATTTGCATCAAAATCAACAGGAAACA
TTACAAATCTCAAGATAGGTCCAAGAGTTTGATACAAATTCATGAACATG
AACAAGCCCTACTCTCTCTCCCTCTCTCTCTCTTCAATCTACGATGCTCT
GCAGTGGAATAATAAGCAAAAGGAAGAAAAATAATCTTGCTTTTATTAAA
ACAAGAGAGACCATAATGAAGCAACTCTCTTGGGAATGGTCTCTTCACTG
TAATCACCAATTCCCAAATGCATATGGAATAATAAGAAGTTTTTGACTAA
CCAAGCTTAGCAGACTTCTTTGGCTGCAGTGATAACAGCCTCCGCGGTGA
TACCAAACTCCTTGTATATTTTGCCTGCTGGTGCACTAGCACCGAATCGG
TCAATGCCGATGGCCTTTCCTTTGCTTCCAACAATCTTCTCCCACCCAAA
TGTAGATCCAGCTTCAATGCTAACTCTAGCTGAGACAGCAGCCGGAAGCA
CACTTTCCTTGTAGGCATCTGATTGCTCATCAAAAAGCTCCCAAGAAACA
AAGGAGACAACTCTTACAGCCTTTCCTCCCTTTCTAAGTTCCTCAGCTGC
TTTGGCGGCAATTTCCAATTCAGAACCAGTTCCAATCAAAATGACATCAG
GTTTGTTACCAGAAGAATTGTCCGAAATTATGTAGGCACCCTTTTCAACA
CCATCAATGGAAGTTCCAGCAAGGTGGGGAAGCTT
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