CF833026

Overview
NameCF833026
Unique NameCF833026
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length735
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF833026 vs. ExPASy Swiss-Prot
Match: TKT2_VIBPA (Transketolase 2 OS=Vibrio parahaemolyticus GN=tkt2 PE=3 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 2.330e-22
Identity = 59/129 (45.74%), Postives = 79/129 (61.24%), Query Frame = -1
Query:  313 VEKGAYIISDNSSGNKPDVILIGTGSXXXXXXXXXXXLRKGGKAVRVVSFVSWELFDEQSDAYKESVLPAAVSARVSIEAGSTFGWEKIVGSKGKAIGIDRFGASAPAGKIYKEFGITAEAVITAAKEV 699
            + KG YI+ D  S  KP++ILI TGS           L   GK VRVVS  S + FD+Q   Y+E+VLP+ V+AR++IEAG    W K VG  G+ IG+  FG SAPA ++++ FG T E V+  AKE+
Sbjct:  535 IAKGGYILKD--SEGKPELILIATGSEVELAVKAAEQLTAEGKKVRVVSMPSTDAFDKQDADYREAVLPSDVTARIAIEAGIADFWYKYVGFDGRIIGMTTFGESAPADQLFEMFGFTVENVVNTAKEL 661          
BLAST of CF833026 vs. ExPASy Swiss-Prot
Match: TKT_STAES (Transketolase OS=Staphylococcus epidermidis (strain ATCC 12228) GN=tkt PE=3 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 1.972e-21
Identity = 51/131 (38.93%), Postives = 79/131 (60.31%), Query Frame = -1
Query:  313 DGVEKGAYIISDNSSGNKPDVILIGTGSXXXXXXXXXXXLRKGGKAVRVVSFVSWELFDEQSDAYKESVLPAAVSARVSIEAGSTFGWEKIVGSKGKAIGIDRFGASAPAGKIYKEFGITAEAVITAAKEV 705
            +GV KGAYI+ +     + + +L+ +GS           L + GK VRV+S  +W  F++QS  YKES+LP+ V+ R++IE  S  GW K VG +GK IGI+ FGASAP   + +++G T E ++   + +
Sbjct:  534 NGVRKGAYIVFETEQ--QLEYLLLASGSEVNLAVEAAKELEQQGKGVRVISMPNWYAFEQQSSEYKESILPSDVTKRIAIEMASPLGWHKYVGIEGKVIGINSFGASAPGDLVVEKYGFTKENILKQVRSL 662          
BLAST of CF833026 vs. ExPASy Swiss-Prot
Match: TKT_STAEQ (Transketolase OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=tkt PE=3 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 1.972e-21
Identity = 51/131 (38.93%), Postives = 79/131 (60.31%), Query Frame = -1
Query:  313 DGVEKGAYIISDNSSGNKPDVILIGTGSXXXXXXXXXXXLRKGGKAVRVVSFVSWELFDEQSDAYKESVLPAAVSARVSIEAGSTFGWEKIVGSKGKAIGIDRFGASAPAGKIYKEFGITAEAVITAAKEV 705
            +GV KGAYI+ +     + + +L+ +GS           L + GK VRV+S  +W  F++QS  YKES+LP+ V+ R++IE  S  GW K VG +GK IGI+ FGASAP   + +++G T E ++   + +
Sbjct:  534 NGVRKGAYIVFETEQ--QLEYLLLASGSEVNLAVEAAKELEQQGKGVRVISMPNWYAFEQQSSEYKESILPSDVTKRIAIEMASPLGWHKYVGIEGKVIGINSFGASAPGDLVVEKYGFTKENILKQVRSL 662          
BLAST of CF833026 vs. ExPASy Swiss-Prot
Match: TKT_MYCTU (Transketolase OS=Mycobacterium tuberculosis GN=tkt PE=3 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 3.364e-21
Identity = 57/141 (40.43%), Postives = 80/141 (56.74%), Query Frame = -1
Query:  319 LPHLAGTSIDGVEKGAYIISDNSS---GNKPDVILIGTGSXXXXXXXXXXXLRKGGKAVRVVSFVSWELFDEQSDAYKESVLPAAVSARVSIEAGSTFGWEKIVGSKGKAIGIDRFGASAPAGKIYKEFGITAEAVITAAK 732
            +P L GT  +GV +G Y++SD      G +PDVILI TGS           L       RVVS    E F+ Q   Y+++VLP  VSARV++EAG    W ++VG  G+ + I+ +G SA    +++E+G TAEAV  AA+
Sbjct:  555 VPVLDGTDAEGVARGGYVLSDAGGLQPGEEPDVILIATGSEVQLAVAAQTLLADNDILARVVSMPCLEWFEAQPYEYRDAVLPPTVSARVAVEAGVAQCWHQLVGDTGEIVSIEHYGESADHKTLFREYGFTAEAVAAAAE 695          
BLAST of CF833026 vs. ExPASy Swiss-Prot
Match: TKT_MYCBO (Transketolase OS=Mycobacterium bovis GN=tkt PE=3 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 3.364e-21
Identity = 57/141 (40.43%), Postives = 80/141 (56.74%), Query Frame = -1
Query:  319 LPHLAGTSIDGVEKGAYIISDNSS---GNKPDVILIGTGSXXXXXXXXXXXLRKGGKAVRVVSFVSWELFDEQSDAYKESVLPAAVSARVSIEAGSTFGWEKIVGSKGKAIGIDRFGASAPAGKIYKEFGITAEAVITAAK 732
            +P L GT  +GV +G Y++SD      G +PDVILI TGS           L       RVVS    E F+ Q   Y+++VLP  VSARV++EAG    W ++VG  G+ + I+ +G SA    +++E+G TAEAV  AA+
Sbjct:  555 VPVLDGTDAEGVARGGYVLSDAGGLQPGEEPDVILIATGSEVQLAVAAQTLLADNDILARVVSMPCLEWFEAQPYEYRDAVLPPTVSARVAVEAGVAQCWHQLVGDTGEIVSIEHYGESADHKTLFREYGFTAEAVAAAAE 695          
BLAST of CF833026 vs. ExPASy Swiss-Prot
Match: TKT_AQUAE (Transketolase OS=Aquifex aeolicus GN=tkt PE=3 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 3.364e-21
Identity = 55/126 (43.65%), Postives = 73/126 (57.94%), Query Frame = -1
Query:  334 SIDGVEKGAYIISDNSSGNKPDVILIGTGSXXXXXXXXXXXLRKGGKAVRVVSFVSWELFDEQSDAYKESVLPAAVSARVSIEAGSTFGWEKIVGSKGKAIGIDRFGASAPAGKIYKEFGITAEAV 711
            S +GV KGAY+I+D     KPDV++I TGS           L + G   RVV+    ELF+EQ + YK  VLP  V+ RV++EAG   GW K VGS G  I ++ FG SAP   +++ +G T E V
Sbjct:  556 SPEGVRKGAYVIADTEG--KPDVVIIATGSEVQVALGAKEILEQKGIKTRVVNMACCELFEEQPEEYKREVLPPEVTKRVAVEAGRDTGWYKYVGSDGLVISLNEFGKSAPGSVLFEYYGFTPENV 679          
BLAST of CF833026 vs. ExPASy Swiss-Prot
Match: TKT2_PASMU (Transketolase 2 OS=Pasteurella multocida GN=tktB PE=3 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 3.364e-21
Identity = 57/130 (43.85%), Postives = 78/130 (60.00%), Query Frame = -1
Query:  313 VEKGAYIISDNSSG-NKPDVILIGTGSXXXXXXXXXXXLRKGGKAVRVVSFVSWELFDEQSDAYKESVLPAAVSARVSIEAGSTFGWEKIVGSKGKAIGIDRFGASAPAGKIYKEFGITAEAVITAAKEV 699
            V +G Y++       N PD+ILI TGS           L   G  VRVVS  S  +FD+Q  AY+ESVLP+ ++ RV+IEAG    W K VG +G+ +G++ FG SAPA +++K FG T E V+  AKE+
Sbjct:  538 VARGGYVLRHCCENQNCPDLILIATGSEVELAMKAADVLDAEGVKVRVVSMPSTNVFDKQDAAYRESVLPSHITKRVAIEAGIADFWYKYVGFEGRVVGMNSFGESAPADQLFKLFGFTVENVVAKAKEI 667          
BLAST of CF833026 vs. ExPASy Swiss-Prot
Match: TKT_PHYPO (Transketolase OS=Physarum polycephalum GN=tkt PE=2 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 9.787e-21
Identity = 64/141 (45.39%), Postives = 80/141 (56.74%), Query Frame = -1
Query:  322 LPHLAGTSI----DGVEKGAYIISDNSSGNKPDVILIGTGSXXXXXXXXXXXLRKGGKAVRVVSFVSWELFDEQSDAYKESVLPAAVSARVSIEAGSTFGWEKIVGSKGKAIGIDRFGASAPAGKIYKEFGITAEAVITAA 732
            LP+L+   +    +GV KG YI+   +   K  VI+I TGS            ++ G  VRVVS  S   FD+Q   YKE VLP++   RV IEAG T  W K VG +GK IGIDRFG SAP   + K  GITA+AV+ AA
Sbjct:  523 LPNLSQFDVNARREGVLKGGYILQKETGALK--VIVISTGSELNVAVEAA---KRLGDGVRVVSMPSTYRFDQQPAEYKEEVLPSSCKKRVVIEAGVTPLWHKYVGLEGKIIGIDRFGTSAPGATVLKTLGITADAVVAAA 658          
BLAST of CF833026 vs. ExPASy Swiss-Prot
Match: TKT1_ECOLI (Transketolase 1 OS=Escherichia coli (strain K12) GN=tktA PE=1 SV=5)

HSP 1 Score: 99.3673 bits (246), Expect = 2.180e-20
Identity = 54/129 (41.86%), Postives = 75/129 (58.14%), Query Frame = -1
Query:  313 VEKGAYIISDNSSGNKPDVILIGTGSXXXXXXXXXXXLRKGGKAVRVVSFVSWELFDEQSDAYKESVLPAAVSARVSIEAGSTFGWEKIVGSKGKAIGIDRFGASAPAGKIYKEFGITAEAVITAAKEV 699
            + +G Y++ D     +P++I I TGS           L   G   RVVS  S + FD+Q  AY+ESVLP AV+ARV++EAG    W K VG  G  +G+  FG SAPA  +++EFG T + V+  AKE+
Sbjct:  536 IARGGYVLKD--CAGQPELIFIATGSEVELAVAAYEKLTAEGVKARVVSMPSTDAFDKQDAAYRESVLPKAVTARVAVEAGIADYWYKYVGLNGAIVGMTTFGESAPAELLFEEFGFTVDNVVAKAKEL 662          
BLAST of CF833026 vs. ExPASy Swiss-Prot
Match: TKT1_PASMU (Transketolase 1 OS=Pasteurella multocida GN=tktA PE=3 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 2.848e-20
Identity = 55/130 (42.31%), Postives = 77/130 (59.23%), Query Frame = -1
Query:  313 VEKGAYIISDNSSG-NKPDVILIGTGSXXXXXXXXXXXLRKGGKAVRVVSFVSWELFDEQSDAYKESVLPAAVSARVSIEAGSTFGWEKIVGSKGKAIGIDRFGASAPAGKIYKEFGITAEAVITAAKEV 699
            V +G Y++       N PD+ILI TGS           L   G  VRVVS  S  +FD+Q  AY+ESVLP+ ++ RV+IEAG    W K VG +G+ +G++ FG SAPA +++K FG T E ++  AK +
Sbjct:  538 VARGGYVLRHCCENQNCPDLILIATGSEVELAMKAADVLDAEGVKVRVVSMPSTNVFDKQDAAYRESVLPSHITKRVAIEAGIADFWYKYVGFEGRVVGMNSFGESAPADQLFKLFGFTVENIVEKAKAI 667          
The following BLAST results are available for this feature:
BLAST of CF833026 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 57
Match NameE-valueIdentityDescription
TKT2_VIBPA2.330e-2245.74Transketolase 2 OS=Vibrio parahaemolyticus GN=tkt2... [more]
TKT_STAES1.972e-2138.93Transketolase OS=Staphylococcus epidermidis (strai... [more]
TKT_STAEQ1.972e-2138.93Transketolase OS=Staphylococcus epidermidis (strai... [more]
TKT_MYCTU3.364e-2140.43Transketolase OS=Mycobacterium tuberculosis GN=tkt... [more]
TKT_MYCBO3.364e-2140.43Transketolase OS=Mycobacterium bovis GN=tkt PE=3 S... [more]
TKT_AQUAE3.364e-2143.65Transketolase OS=Aquifex aeolicus GN=tkt PE=3 SV=1[more]
TKT2_PASMU3.364e-2143.85Transketolase 2 OS=Pasteurella multocida GN=tktB P... [more]
TKT_PHYPO9.787e-2145.39Transketolase OS=Physarum polycephalum GN=tkt PE=2... [more]
TKT1_ECOLI2.180e-2041.86Transketolase 1 OS=Escherichia coli (strain K12) G... [more]
TKT1_PASMU2.848e-2042.31Transketolase 1 OS=Pasteurella multocida GN=tktA P... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_02N10_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa02N10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF833026 ID=CF833026; Name=CF833026; organism=Citrus sinensis; type=EST; length=735bp
TTTTTTTTGATCATGGACGAGCAAATTTGCATCAAAATCAACAGGAAACA
TTACAAATCTCAAGATAGGTCCAAGAGTTTGATACAAATTCATGAACATG
AACAAGCCCTACTCTCTCTCCCTCTCTCTCTCTTCAATCTACGATGCTCT
GCAGTGGAATAATAAGCAAAAGGAAGAAAAATAATCTTGCTTTTATTAAA
ACAAGAGAGACCATAATGAAGCAACTCTCTTGGGAATGGTCTCTTCACTG
TAATCACCAATTCCCAAATGCATATGGAATAATAAGAAGTTTTTGACTAA
CCAAGCTTAGCAGACTTCTTTGGCTGCAGTGATAACAGCCTCCGCGGTGA
TACCAAACTCCTTGTATATTTTGCCTGCTGGTGCACTAGCACCGAATCGG
TCAATGCCGATGGCCTTTCCTTTGCTTCCAACAATCTTCTCCCACCCAAA
TGTAGATCCAGCTTCAATGCTAACTCTAGCTGAGACAGCAGCCGGAAGCA
CACTTTCCTTGTAGGCATCTGATTGCTCATCAAAAAGCTCCCAAGAAACA
AAGGAGACAACTCTTACAGCCTTTCCTCCCTTTCTAAGTTCCTCAGCTGC
TTTGGCGGCAATTTCCAATTCAGAACCAGTTCCAATCAAAATGACATCAG
GTTTGTTACCAGAAGAATTGTCCGAAATTATGTAGGCACCCTTTTCAACA
CCATCAATGGAAGTTCCAGCAAGGTGGGGAAGCTT
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