CF833068
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF833068 vs. ExPASy Swiss-Prot
Match: NLT2B_ORYSJ (Non-specific lipid-transfer protein 2B OS=Oryza sativa subsp. japonica GN=LTP2-B PE=2 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 1.272e-20 Identity = 52/113 (46.02%), Postives = 70/113 (61.95%), Query Frame = -1 Query: 265 LVLVCLMGSAFVS----TKAQVTCRTVVNDLSPCISYVSYGGAVTTNCCNGVRTLYNAARSTADRQTVCTCLKQAVSGISYTRYQLGLAAGLPGKCGLNIPYQISPSTDCSRV 591 LVLV L+ + ++ T A ++C V + +SPC+SY G + CC+GVR+L +AA +TADR+T C CLK IS G AA +P KCG++IPY ISPS DCS V Sbjct: 6 LVLVALVAALLLAGPHTTMAAISCGQVNSAVSPCLSYARGGSGPSAACCSGVRSLNSAATTTADRRTACNCLKNVAGSIS--GLNAGNAASIPSKCGVSIPYTISPSIDCSSV 116
BLAST of CF833068 vs. ExPASy Swiss-Prot
Match: NLTP2_TOBAC (Non-specific lipid-transfer protein 2 OS=Nicotiana tabacum PE=3 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 1.662e-20 Identity = 48/93 (51.61%), Postives = 65/93 (69.89%), Query Frame = -1 Query: 262 VTCRTVVNDLSPCISYVSYGGAVTTNCCNGVRTLYNAARSTADRQTVCTCLKQAVSGISYTRYQLGLAAGLPGKCGLNIPYQISPSTDCSRVQ 540 ++C V + L+PC+ Y+ G + + CC GV+ L AA+S +DR+T CTCLK A + I +G AAGLPG CG+NIPY+ISPSTDCS+VQ Sbjct: 25 LSCGQVQSGLAPCLPYLQGRGPLGS-CCGGVKGLLGAAKSLSDRKTACTCLKSAANAIK--GIDMGKAAGLPGACGVNIPYKISPSTDCSKVQ 114
BLAST of CF833068 vs. ExPASy Swiss-Prot
Match: NLTP_SPIOL (Non-specific lipid-transfer protein OS=Spinacia oleracea PE=1 SV=2) HSP 1 Score: 98.9821 bits (245), Expect = 2.170e-20 Identity = 51/108 (47.22%), Postives = 71/108 (65.74%), Query Frame = -1 Query: 265 VLVCLMGSAFVSTKAQVTCRTVVNDLSPCISYVSYGGAVTTNCCNGVRTLYNAARSTADRQTVCTCLKQAVSGISYTRYQLGLAAGLPGKCGLNIPYQISPSTDCSRV 588 VL+C++ +A + +A +TC V + L+PCI Y+ GG + CC G++ L AA +T DR+T C CLK A + I Y G AAGLPG CG++IPY ISPST+C+ V Sbjct: 13 VLLCIVVAAPYA-EAGITCGMVSSKLAPCIGYLK-GGPLGGGCCGGIKALNAAAATTPDRKTACNCLKSAANAIKGINY--GKAAGLPGMCGVHIPYAISPSTNCNAV 116
BLAST of CF833068 vs. ExPASy Swiss-Prot
Match: NLTP_GERHY (Non-specific lipid-transfer protein OS=Gerbera hybrida PE=3 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 2.834e-20 Identity = 51/111 (45.95%), Postives = 71/111 (63.96%), Query Frame = -1 Query: 265 CILVLVCLMGSAFVSTKAQVTCRTVVNDLSPCISYVSYGGAVTTNCCNGVRTLYNAARSTADRQTVCTCLKQAVSGISYTRYQLGLAAGLPGKCGLNIPYQISPSTDCSRV 597 C+ V C++ SA S ++C V + L PC Y++ GG V CCNGVR L NAA++T DRQT C CLK ++ + TR L A LPGKCG++I Y+I+P+ DCS++ Sbjct: 10 CVAV-ACMVFSA--SYADAISCGQVTSGLVPCFGYLAAGGPVPPACCNGVRGLNNAAKTTPDRQTACGCLKGILA--ANTRINLNNANSLPGKCGISIGYKITPNIDCSKI 115
BLAST of CF833068 vs. ExPASy Swiss-Prot
Match: NLTPB_BRAOT (Non-specific lipid-transfer protein B OS=Brassica oleracea var. italica GN=WAX9B PE=3 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 2.834e-20 Identity = 50/116 (43.10%), Postives = 70/116 (60.34%), Query Frame = -1 Query: 262 LVTGCILVLVCLMGSAFVSTKAQVTCRTVVNDLSPCISYVSYGGAVTTNCCNGVRTLYNAARSTADRQTVCTCLKQAVSGISYTRYQLGLAAGLPGKCGLNIPYQISPSTDCSRVQ 609 LV LVL C++ + ++T A ++C TV +L+ CI Y++ G + CC GV L N AR+T DRQ C CL A + S+ AAGLP CG+NIPY+IS ST+C+ V+ Sbjct: 4 LVKLSCLVLACMIVAGPIATNAALSCGTVSGNLAACIGYLTQNGPLPRGCCTGVTNLNNMARTTPDRQQACRCLVGAAN--SFPTLNAARAAGLPKACGVNIPYKISKSTNCNSVR 117
BLAST of CF833068 vs. ExPASy Swiss-Prot
Match: NLTP1_PRUPE (Non-specific lipid-transfer protein 1 OS=Prunus persica PE=1 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 2.834e-20 Identity = 49/96 (51.04%), Postives = 64/96 (66.67%), Query Frame = -1 Query: 262 VTCRTVVNDLSPCISYVSYGGAVTTNCCNGVRTLYNAARSTADRQTVCTCLKQ---AVSGISYTRYQLGLAAGLPGKCGLNIPYQISPSTDCSRVQ 540 +TC V + L+PCI YV GGAV CCNG+R + N AR+T DRQ C CLKQ +V G++ AA LPGKCG++IPY+IS ST+C+ V+ Sbjct: 1 ITCGQVSSALAPCIPYVRGGGAVPPACCNGIRNVNNLARTTPDRQAACNCLKQLSASVPGVNPNN-----AAALPGKCGVHIPYKISASTNCATVK 91
BLAST of CF833068 vs. ExPASy Swiss-Prot
Match: NLTP2_BRANA (Non-specific lipid-transfer protein 2 OS=Brassica napus GN=LTP2 PE=3 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 3.702e-20 Identity = 51/119 (42.86%), Postives = 72/119 (60.50%), Query Frame = -1 Query: 262 LMKLVTGCILVLVCLMGSAFVSTKAQVTCRTVVNDLSPCISYVSYGGAVTTNCCNGVRTLYNAARSTADRQTVCTCLKQAVSGISYTRYQLGLAAGLPGKCGLNIPYQISPSTDCSRVQ 618 LMKL LVL C++ + +++ A ++C TV ++PCI Y++ G + CC GV L N AR+T DRQ C CL A + S+ AAGLP CG+NIPY+IS ST+C+ V+ Sbjct: 4 LMKLAC---LVLACMIVAGPITSNAALSCGTVSGYVAPCIGYLTQNGPLPRGCCTGVTNLNNMARTTPDRQQACRCLVGAAN--SFPTLNAARAAGLPKACGVNIPYKISKSTNCNSVR 117
BLAST of CF833068 vs. ExPASy Swiss-Prot
Match: NLTP_DAUCA (Non-specific lipid-transfer protein OS=Daucus carota GN=EP2 PE=2 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 6.314e-20 Identity = 48/99 (48.48%), Postives = 64/99 (64.65%), Query Frame = -1 Query: 265 STKAQVTCRTVVNDLSPCISYV--SYGGAVTTNCCNGVRTLYNAARSTADRQTVCTCLKQAVSGISYTRYQLGLAAGLPGKCGLNIPYQISPSTDCSRV 555 + +A +TC V L+PC+ Y+ V CCN VR L NAAR+T D++T C CLKQ + + T L AAGLP +CG+NIPY+ISP+TDC+RV Sbjct: 23 NAEAVLTCGQVTGALAPCLGYLRSQVNVPVPLTCCNVVRGLNNAARTTLDKRTACGCLKQTANAV--TGLNLNAAAGLPARCGVNIPYKISPTTDCNRV 119
BLAST of CF833068 vs. ExPASy Swiss-Prot
Match: NLTP1_SORBI (Non-specific lipid-transfer protein 1 OS=Sorghum bicolor GN=LTP1 PE=3 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 6.314e-20 Identity = 50/119 (42.02%), Postives = 74/119 (62.18%), Query Frame = -1 Query: 265 LMKLVTGCILVLVCLMGSAFVSTKAQVTCRTVVNDLSPCISYV-SYGGAVTTNCCNGVRTLYNAARSTADRQTVCTCLKQAVSGISYTRYQLGLAAGLPGKCGLNIPYQISPSTDCSRV 618 + +L +V ++ A +++A ++C V + ++ C+SY G A + CC+GVR+L +AAR+TADR+ C CLK A GIS G AA +P KCG+++PY IS STDCSRV Sbjct: 1 MARLAVAIAVVAAVVVVLAATTSEAAISCGQVSSAIALCLSYARGQGFAPSAGCCSGVRSLNSAARTTADRRAACNCLKNAARGIS--GLNAGNAASIPSKCGVSVPYTISTSTDCSRV 117
BLAST of CF833068 vs. ExPASy Swiss-Prot
Match: NLTP1_BRANA (Non-specific lipid-transfer protein 1 OS=Brassica napus GN=LTP1 PE=3 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 6.314e-20 Identity = 49/116 (42.24%), Postives = 70/116 (60.34%), Query Frame = -1 Query: 262 LVTGCILVLVCLMGSAFVSTKAQVTCRTVVNDLSPCISYVSYGGAVTTNCCNGVRTLYNAARSTADRQTVCTCLKQAVSGISYTRYQLGLAAGLPGKCGLNIPYQISPSTDCSRVQ 609 LV LVL C++ + ++T A ++C TV +L+ CI Y++ G + CC GV L N AR+T DRQ C CL A + ++ AAGLP CG+NIPY+IS ST+C+ V+ Sbjct: 4 LVKLSCLVLACMIVAGPIATNAALSCGTVSGNLAACIGYLTQNGPLPRGCCTGVTNLNNMARTTPDRQQACRCLVGAAN--AFPTLNAARAAGLPKACGVNIPYKISKSTNCNSVR 117 The following BLAST results are available for this feature:
BLAST of CF833068 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 75
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Sequences
The
following sequences are available for this feature:
EST sequence >CF833068 ID=CF833068; Name=CF833068; organism=Citrus sinensis; type=EST; length=633bpback to top |