CF833083

Overview
NameCF833083
Unique NameCF833083
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length784
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CF833083 vs. ExPASy Swiss-Prot
Match: QKI_FELCA (Protein quaking OS=Felis catus GN=QKI PE=2 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 5.906e-27
Identity = 59/115 (51.30%), Postives = 81/115 (70.43%), Query Frame = -3 
Query:  438 KYPNFNFVGRILGPRGNSLKRVEAMTECRVFIRGRGSVKDSIKEEKLKDKPGYEHLNEPLHVLVEAEFPEDIINSRLDHAVAILENLLKPVDESLDHYKKQQLRELAMLNGTLRE 782
            +YP+FNFVGRILGPRG + K++EA T C++ +RG+GS++D  KEE+ + KP +EHLNE LHVL+  E  ++    +L  AV  ++ LL P  E  D  KK QL ELA+LNGT R+
Sbjct:   92 EYPDFNFVGRILGPRGLTAKQLEAETGCKIMVRGKGSMRDKKKEEQNRGKPNWEHLNEDLHVLITVEDAQNRAEIKLKRAVEEVKKLLVPAAEGEDSLKKMQLMELAILNGTYRD 206
[Close]
BLAST of CF833083 vs. ExPASy Swiss-Prot
Match: QKI_CANFA (Protein quaking OS=Canis familiaris GN=QKI PE=2 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 5.906e-27
Identity = 59/115 (51.30%), Postives = 81/115 (70.43%), Query Frame = -3 
Query:  438 KYPNFNFVGRILGPRGNSLKRVEAMTECRVFIRGRGSVKDSIKEEKLKDKPGYEHLNEPLHVLVEAEFPEDIINSRLDHAVAILENLLKPVDESLDHYKKQQLRELAMLNGTLRE 782
            +YP+FNFVGRILGPRG + K++EA T C++ +RG+GS++D  KEE+ + KP +EHLNE LHVL+  E  ++    +L  AV  ++ LL P  E  D  KK QL ELA+LNGT R+
Sbjct:   92 EYPDFNFVGRILGPRGLTAKQLEAETGCKIMVRGKGSMRDKKKEEQNRGKPNWEHLNEDLHVLITVEDAQNRAEIKLKRAVEEVKKLLVPAAEGEDSLKKMQLMELAILNGTYRD 206
[Close]
BLAST of CF833083 vs. ExPASy Swiss-Prot
Match: QKI_BOVIN (Protein quaking OS=Bos taurus GN=QKI PE=2 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 5.906e-27
Identity = 59/115 (51.30%), Postives = 81/115 (70.43%), Query Frame = -3 
Query:  438 KYPNFNFVGRILGPRGNSLKRVEAMTECRVFIRGRGSVKDSIKEEKLKDKPGYEHLNEPLHVLVEAEFPEDIINSRLDHAVAILENLLKPVDESLDHYKKQQLRELAMLNGTLRE 782
            +YP+FNFVGRILGPRG + K++EA T C++ +RG+GS++D  KEE+ + KP +EHLNE LHVL+  E  ++    +L  AV  ++ LL P  E  D  KK QL ELA+LNGT R+
Sbjct:   92 EYPDFNFVGRILGPRGLTAKQLEAETGCKIMVRGKGSMRDKKKEEQNRGKPNWEHLNEDLHVLITVEDAQNRAEIKLKRAVEEVKKLLVPAAEGEDSLKKMQLMELAILNGTYRD 206
[Close]
BLAST of CF833083 vs. ExPASy Swiss-Prot
Match: QKIB_XENLA (Protein quaking-B OS=Xenopus laevis GN=qki-B PE=1 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 5.906e-27
Identity = 59/115 (51.30%), Postives = 81/115 (70.43%), Query Frame = -3 
Query:  438 KYPNFNFVGRILGPRGNSLKRVEAMTECRVFIRGRGSVKDSIKEEKLKDKPGYEHLNEPLHVLVEAEFPEDIINSRLDHAVAILENLLKPVDESLDHYKKQQLRELAMLNGTLRE 782
            +YP+FNFVGRILGPRG + K++EA T C++ +RG+GS++D  KEE+ + KP +EHLNE LHVL+  E  ++    +L  AV  ++ LL P  E  D  KK QL ELA+LNGT R+
Sbjct:   93 EYPDFNFVGRILGPRGLTAKQLEAETGCKIMVRGKGSMRDKKKEEQNRGKPNWEHLNEDLHVLITVEDAQNRAEIKLKRAVEEVKKLLVPAAEGEDSLKKMQLMELAILNGTYRD 207
[Close]
BLAST of CF833083 vs. ExPASy Swiss-Prot
Match: QKIB_DANRE (Protein quaking-B OS=Danio rerio GN=qkib PE=2 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 5.906e-27
Identity = 59/115 (51.30%), Postives = 81/115 (70.43%), Query Frame = -3 
Query:  438 KYPNFNFVGRILGPRGNSLKRVEAMTECRVFIRGRGSVKDSIKEEKLKDKPGYEHLNEPLHVLVEAEFPEDIINSRLDHAVAILENLLKPVDESLDHYKKQQLRELAMLNGTLRE 782
            +YP+FNFVGRILGPRG + K++EA T C++ +RG+GS++D  KEE+ + KP +EHLNE LHVL+  E  ++    +L  AV  ++ LL P  E  D  KK QL ELA+LNGT R+
Sbjct:   92 EYPDFNFVGRILGPRGLTAKQLEAETGCKIMVRGKGSMRDKKKEEQNRGKPNWEHLNEDLHVLITVEDSQNRAEIKLKRAVEEVKKLLVPAAEGEDSLKKMQLMELAILNGTYRD 206
[Close]
BLAST of CF833083 vs. ExPASy Swiss-Prot
Match: QKIA_XENLA (Protein quaking-A OS=Xenopus laevis GN=qki-A PE=1 SV=2)

HSP 1 Score: 121.324 bits (303), Expect = 5.906e-27
Identity = 59/115 (51.30%), Postives = 81/115 (70.43%), Query Frame = -3 
Query:  438 KYPNFNFVGRILGPRGNSLKRVEAMTECRVFIRGRGSVKDSIKEEKLKDKPGYEHLNEPLHVLVEAEFPEDIINSRLDHAVAILENLLKPVDESLDHYKKQQLRELAMLNGTLRE 782
            +YP+FNFVGRILGPRG + K++EA T C++ +RG+GS++D  KEE+ + KP +EHLNE LHVL+  E  ++    +L  AV  ++ LL P  E  D  KK QL ELA+LNGT R+
Sbjct:   93 EYPDFNFVGRILGPRGLTAKQLEAETGCKIMVRGKGSMRDKKKEEQNRGKPNWEHLNEDLHVLITVEDAQNRAELKLKRAVEEVKKLLVPAAEGEDSLKKMQLMELAILNGTYRD 207
[Close]
BLAST of CF833083 vs. ExPASy Swiss-Prot
Match: QKI_CHICK (Protein quaking OS=Gallus gallus GN=QKI PE=2 SV=2)

HSP 1 Score: 120.939 bits (302), Expect = 7.713e-27
Identity = 59/115 (51.30%), Postives = 81/115 (70.43%), Query Frame = -3 
Query:  438 KYPNFNFVGRILGPRGNSLKRVEAMTECRVFIRGRGSVKDSIKEEKLKDKPGYEHLNEPLHVLVEAEFPEDIINSRLDHAVAILENLLKPVDESLDHYKKQQLRELAMLNGTLRE 782
            +YP+FNFVGRILGPRG + K++EA T C++ +RG+GS++D  KEE+ + KP +EHLNE LHVL+  E  ++    +L  AV  ++ LL P  E  D  KK QL ELA+LNGT R+
Sbjct:   92 EYPDFNFVGRILGPRGLTAKQLEAETGCKIMVRGKGSMRDKKKEEQNRGKPNWEHLNEDLHVLITVEDAQNRAEIKLKRAVEEVKKLLIPAAEGEDSLKKMQLMELAILNGTYRD 206
[Close]
BLAST of CF833083 vs. ExPASy Swiss-Prot
Match: QKIA_DANRE (Protein quaking-A OS=Danio rerio GN=qkia PE=2 SV=2)

HSP 1 Score: 117.857 bits (294), Expect = 6.530e-26
Identity = 57/115 (49.57%), Postives = 80/115 (69.57%), Query Frame = -3 
Query:  438 KYPNFNFVGRILGPRGNSLKRVEAMTECRVFIRGRGSVKDSIKEEKLKDKPGYEHLNEPLHVLVEAEFPEDIINSRLDHAVAILENLLKPVDESLDHYKKQQLRELAMLNGTLRE 782
            +YP++NFVGRILGPRG + K++EA T C++ +RGR S++D  KEE+ + KP +EHLNE LHVL+  E  +     ++  AV  ++ LL P  E  D+ KK QL ELA+LNGT R+
Sbjct:   92 EYPDYNFVGRILGPRGLTAKQLEAETGCKIMVRGRSSMRDKKKEEQNRGKPNWEHLNEDLHVLITVEDTQTRAEIKMRRAVEEVKKLLVPAAEGEDNLKKMQLMELAILNGTYRD 206
[Close]
BLAST of CF833083 vs. ExPASy Swiss-Prot
Match: HOW_DROME (Protein held out wings OS=Drosophila melanogaster GN=how PE=1 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 4.232e-25
Identity = 55/115 (47.83%), Postives = 81/115 (70.43%), Query Frame = -3 
Query:  438 KYPNFNFVGRILGPRGNSLKRVEAMTECRVFIRGRGSVKDSIKEEKLKDKPGYEHLNEPLHVLVEAEFPEDIINSRLDHAVAILENLLKPVDESLDHYKKQQLRELAMLNGTLRE 782
            ++P+FNFVGRILGPRG + K++E  T C++ +RG+GS++D  KE+  + KP +EHL++ LHVL+  E  E+    +L  AVA ++ LL P  E  D  KK+QL ELA++NGT R+
Sbjct:  147 EHPDFNFVGRILGPRGMTAKQLEQETGCKIMVRGKGSMRDKKKEDANRGKPNWEHLSDDLHVLITVEDTENRATVKLAQAVAEVQKLLVPQAEGEDELKKRQLMELAIINGTYRD 261
[Close]
BLAST of CF833083 vs. ExPASy Swiss-Prot
Match: GLD1_CAEEL (Female germline-specific tumor suppressor gld-1 OS=Caenorhabditis elegans GN=gld-1 PE=1 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 6.112e-24
Identity = 52/114 (45.61%), Postives = 79/114 (69.30%), Query Frame = -3 
Query:  441 KYPNFNFVGRILGPRGNSLKRVEAMTECRVFIRGRGSVKDSIKEEKLKDKPGYEHLNEPLHVLVEAEFPEDIINSRLDHAVAILENLLKPVDESLDHYKKQQLRELAMLNGTLR 782
            +YP++NFVGRILGPRG + K++E  T C++ +RG+GS++D  KE   + K  +EHL + LHVLV+ E  E+ ++ +L  A+  ++ LL P  E  D  K++QL ELA++NGT R
Sbjct:  215 EYPDYNFVGRILGPRGMTAKQLEQDTGCKIMVRGKGSMRDKSKESAHRGKANWEHLEDDLHVLVQCEDTENRVHIKLQAALEQVKKLLIPAPEGTDELKRKQLMELAIINGTYR 328
The following BLAST results are available for this feature:
BLAST of CF833083 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 46
Match NameE-valueIdentityDescription
QKI_FELCA5.906e-2751.30Protein quaking OS=Felis catus GN=QKI PE=2 SV=1[more]
QKI_CANFA5.906e-2751.30Protein quaking OS=Canis familiaris GN=QKI PE=2 SV... [more]
QKI_BOVIN5.906e-2751.30Protein quaking OS=Bos taurus GN=QKI PE=2 SV=1[more]
QKIB_XENLA5.906e-2751.30Protein quaking-B OS=Xenopus laevis GN=qki-B PE=1 ... [more]
QKIB_DANRE5.906e-2751.30Protein quaking-B OS=Danio rerio GN=qkib PE=2 SV=1[more]
QKIA_XENLA5.906e-2751.30Protein quaking-A OS=Xenopus laevis GN=qki-A PE=1 ... [more]
QKI_CHICK7.713e-2751.30Protein quaking OS=Gallus gallus GN=QKI PE=2 SV=2[more]
QKIA_DANRE6.530e-2649.57Protein quaking-A OS=Danio rerio GN=qkia PE=2 SV=2[more]
HOW_DROME4.232e-2547.83Protein held out wings OS=Drosophila melanogaster ... [more]
GLD1_CAEEL6.112e-2445.61Female germline-specific tumor suppressor gld-1 OS... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_03A01_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa03A01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF833083 ID=CF833083; Name=CF833083; organism=Citrus sinensis; type=EST; length=784bp
TTTTTTTTTTTTTTTTTAAAAATTAATTAGGGGAATCGAGTTTTTTTTAA
TCCATATAAGTAACAAATCTCGATACTCAAGCAGGAATAATACACCAAAG
AAATCATGGATTGCTGACAAACATGTTTAGCTATATAAAACACAAACAGT
GGGAAGCAGATACCCGGTCTGAGATGCCAACAGTTGAGCGCAAAACTAAC
TCAGGATTTCGACCAACTGTTCTCGAATCAAGTCCCTCCCCAAGGTTCTG
AAAAACAAAACCAATGAAGATTGTCAGGACAGCAATCCATCAGCTGCAGT
GATCCAGGGGTTCATCGATGGTCCATTTCATCATTGATATGTATAACATG
TTATCTTCCGGTCTTGGCGCGTTTCATTCCAGCATTGTTAAAGGGCGACA
TACTAGGACTCATACTCGGACTCATGCTTGGGCTTTCTTCTCTTAAAGTA
CCGTTCAGCATAGCTAATTCCCGCAGTTGTTGCTTCTTGTAATGATCCAA
GGATTCATCCACGGGCTTCAAAAGGTTCTCTAGTATTGCTACAGCATGAT
CCAAGCGGGAATTTATTATATCCTCTGGAAATTCGGCCTCCACTAACACG
TGCAGTGGCTCATTAAGATGCTCATATCCAGGTTTATCTTTAAGTTTTTC
TTCCTTTATCGAATCCTTGACTGAACCCCGGCCTCTAATGAACACCCTAC
ATTCTGTCATGGCTTCGACTCTTTTGAGCGAGTTCCCACGCGGTCCCAAA
ATCCGGCCGACAAAATTAAAATTTGGATATTTAT
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