CF833100

Overview
NameCF833100
Unique NameCF833100
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length800
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF833100 vs. ExPASy Swiss-Prot
Match: EI3F1_DROSI (Eukaryotic translation initiation factor 3 subunit F-1 OS=Drosophila simulans GN=eIF3-S5-1 PE=3 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 2.337e-26
Identity = 70/197 (35.53%), Postives = 103/197 (52.28%), Query Frame = -3
Query:  238 VNPQEVIVGWFSTGLGVTGGSALIHEFYCREVPNPVHLTVDTGFRNGEGTVKAYVSVNLSLGDRQLAAQFQEIPLDLRMIEAERVGFDILKSTSVDKLPS----------DLEGMEVLMERLLTLINDIYKYVDDTVEGHAVPDNSVGRILSETVASLPKLSPPAFDKLVNXXXXXXXXXXXXXSITRTQLSLAEKL 798
            VN  E +VGW++TG  VT  S++IHE+Y RE  NPVHLTVDT  + G   ++AYV + L +   +    F  IP++L   E E  G  +L+ T V   P+          DL  +     +L +L++ I KYVDD +     PDN+VGR L + + S+P ++   F ++ N              + +TQL L EKL
Sbjct:   79 VNSNESVVGWWATGNDVTNHSSVIHEYYARECNNPVHLTVDTSLQGGRMGLRAYVCIQLGVPGGKSGCMFTPIPVELTSYEPETFGLKLLQKT-VGVSPAHRPKTVPPMLDLAQISEASTKLQSLLDLILKYVDDVIAHKVTPDNAVGRQLLDLIHSVPHMTHEQFTQMFNANVRNLLLVITLSQLIKTQLQLNEKL 274          
BLAST of CF833100 vs. ExPASy Swiss-Prot
Match: EI3F1_DROSE (Eukaryotic translation initiation factor 3 subunit F-1 OS=Drosophila sechellia GN=eIF3-S5-1 PE=3 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 2.337e-26
Identity = 70/197 (35.53%), Postives = 103/197 (52.28%), Query Frame = -3
Query:  238 VNPQEVIVGWFSTGLGVTGGSALIHEFYCREVPNPVHLTVDTGFRNGEGTVKAYVSVNLSLGDRQLAAQFQEIPLDLRMIEAERVGFDILKSTSVDKLPS----------DLEGMEVLMERLLTLINDIYKYVDDTVEGHAVPDNSVGRILSETVASLPKLSPPAFDKLVNXXXXXXXXXXXXXSITRTQLSLAEKL 798
            VN  E +VGW++TG  VT  S++IHE+Y RE  NPVHLTVDT  + G   ++AYV + L +   +    F  IP++L   E E  G  +L+ T V   P+          DL  +     +L +L++ I KYVDD +     PDN+VGR L + + S+P ++   F ++ N              + +TQL L EKL
Sbjct:   79 VNSNESVVGWWATGNDVTNHSSVIHEYYARECNNPVHLTVDTSLQGGRMGLRAYVCIQLGVPGGKSGCMFTPIPVELTSYEPETFGLKLLQKT-VGVSPAHRPKTVPPMLDLAQISEASTKLQSLLDLILKYVDDVIAHKVTPDNAVGRQLLDLIHSVPHMTHEQFTQMFNANVRNLLLVITLSQLIKTQLQLNEKL 274          
BLAST of CF833100 vs. ExPASy Swiss-Prot
Match: EI3F1_DROME (Eukaryotic translation initiation factor 3 subunit F-1 OS=Drosophila melanogaster GN=eIF3-S5-1 PE=1 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 2.337e-26
Identity = 70/197 (35.53%), Postives = 103/197 (52.28%), Query Frame = -3
Query:  238 VNPQEVIVGWFSTGLGVTGGSALIHEFYCREVPNPVHLTVDTGFRNGEGTVKAYVSVNLSLGDRQLAAQFQEIPLDLRMIEAERVGFDILKSTSVDKLPS----------DLEGMEVLMERLLTLINDIYKYVDDTVEGHAVPDNSVGRILSETVASLPKLSPPAFDKLVNXXXXXXXXXXXXXSITRTQLSLAEKL 798
            VN  E +VGW++TG  VT  S++IHE+Y RE  NPVHLTVDT  + G   ++AYV + L +   +    F  IP++L   E E  G  +L+ T V   P+          DL  +     +L +L++ I KYVDD +     PDN+VGR L + + S+P ++   F ++ N              + +TQL L EKL
Sbjct:   79 VNSNESVVGWWATGNDVTNHSSVIHEYYARECNNPVHLTVDTSLQGGRMGLRAYVCIQLGVPGGKSGCMFTPIPVELTSYEPETFGLKLLQKT-VGVSPAHRPKTVPPMLDLAQISEASTKLQSLLDLILKYVDDVIAHKVTPDNAVGRQLLDLIHSVPHMTHEQFTQMFNANVRNLLLVITLSQLIKTQLQLNEKL 274          
BLAST of CF833100 vs. ExPASy Swiss-Prot
Match: EI3F1_DROER (Eukaryotic translation initiation factor 3 subunit F-1 OS=Drosophila erecta GN=eIF3-S5-1 PE=3 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 2.337e-26
Identity = 70/197 (35.53%), Postives = 103/197 (52.28%), Query Frame = -3
Query:  238 VNPQEVIVGWFSTGLGVTGGSALIHEFYCREVPNPVHLTVDTGFRNGEGTVKAYVSVNLSLGDRQLAAQFQEIPLDLRMIEAERVGFDILKSTSVDKLPS----------DLEGMEVLMERLLTLINDIYKYVDDTVEGHAVPDNSVGRILSETVASLPKLSPPAFDKLVNXXXXXXXXXXXXXSITRTQLSLAEKL 798
            VN  E +VGW++TG  VT  S++IHE+Y RE  NPVHLTVDT  + G   ++AYV + L +   +    F  IP++L   E E  G  +L+ T V   P+          DL  +     +L +L++ I KYVDD +     PDN+VGR L + + S+P ++   F ++ N              + +TQL L EKL
Sbjct:   79 VNSNESVVGWWATGNDVTNHSSVIHEYYARECNNPVHLTVDTSLQGGRMGLRAYVCIQLGVPGGKSGCMFTPIPVELTSYEPETFGLKLLQKT-VGVSPAHRPKTVPPMLDLAQISEASTKLQSLLDLILKYVDDVIAHKVTPDNAVGRQLLDLIHSVPHMTHEQFTQMFNANVRNLLLVITLSQLIKTQLQLNEKL 274          
BLAST of CF833100 vs. ExPASy Swiss-Prot
Match: EI3F1_DROVI (Eukaryotic translation initiation factor 3 subunit F-1 OS=Drosophila virilis GN=eIF3-S5-1 PE=3 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 3.052e-26
Identity = 70/197 (35.53%), Postives = 102/197 (51.78%), Query Frame = -3
Query:  238 VNPQEVIVGWFSTGLGVTGGSALIHEFYCREVPNPVHLTVDTGFRNGEGTVKAYVSVNLSLGDRQLAAQFQEIPLDLRMIEAERVGFDILKSTSVDKLPS----------DLEGMEVLMERLLTLINDIYKYVDDTVEGHAVPDNSVGRILSETVASLPKLSPPAFDKLVNXXXXXXXXXXXXXSITRTQLSLAEKL 798
            VN  E +VGW++TG  VT  S++IHE+Y RE  NPVHLTVDT  + G   ++AYV + L +   +    F  IP++L   E E  G  +L+ T V   P+          DL  +     +L +L+  I KYVDD +     PDN+VGR L + + S+P ++   F ++ N              + +TQL L EKL
Sbjct:   79 VNANESVVGWWATGNEVTNHSSVIHEYYARECNNPVHLTVDTSLQGGRMGLRAYVCIQLGVPGGKTGCMFTPIPVELTSYEPETFGLKLLQKT-VGVSPAHRPKTVPPMLDLAQISEASTKLQSLLELILKYVDDVIAHKVTPDNAVGRQLLDLIHSVPHMTHEQFTQMFNANVRDLLMVITLSQLIKTQLQLNEKL 274          
BLAST of CF833100 vs. ExPASy Swiss-Prot
Match: EI3F1_DROMO (Eukaryotic translation initiation factor 3 subunit F-1 OS=Drosophila mojavensis GN=eIF3-S5-1 PE=3 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 3.052e-26
Identity = 69/197 (35.03%), Postives = 104/197 (52.79%), Query Frame = -3
Query:  238 VNPQEVIVGWFSTGLGVTGGSALIHEFYCREVPNPVHLTVDTGFRNGEGTVKAYVSVNLSLGDRQLAAQFQEIPLDLRMIEAERVGFDILKSTSVDKLPS----------DLEGMEVLMERLLTLINDIYKYVDDTVEGHAVPDNSVGRILSETVASLPKLSPPAFDKLVNXXXXXXXXXXXXXSITRTQLSLAEKL 798
            VN  E +VGW++TG  VT  S++IHE+Y RE  NPVHLTVDT  ++G   ++AY+ + L +   +    F  IP++L   E E  G  +L+ T V   P+          DL  +     +L +L++ I KYVDD +     PDN+VGR L + + S+P ++   F ++ N              + +TQL L EKL
Sbjct:   79 VNANENVVGWWATGNEVTNHSSVIHEYYARECNNPVHLTVDTSLQSGRMGLRAYICIQLGVPGGKTGCMFTPIPVELTSYEPETFGLKLLQKT-VTVSPAHRPKTVAPMLDLAQISEAATKLQSLLDLILKYVDDVIAHKVTPDNAVGRQLLDLIHSVPHMTHEQFTQMFNANVRDLLMVITLSQLIKTQLQLNEKL 274          
BLAST of CF833100 vs. ExPASy Swiss-Prot
Match: EIF3F_AEDAE (Eukaryotic translation initiation factor 3 subunit F OS=Aedes aegypti GN=eIF3-S5 PE=2 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 5.206e-26
Identity = 69/199 (34.67%), Postives = 104/199 (52.26%), Query Frame = -3
Query:  232 VNPQEVIVGWFSTGLGVTGGSALIHEFYCREVPNPVHLTVDTGFRNGEGTVKAYVSVNLSLGDRQLAAQFQEIPLDLRMIEAERVGFDIL-KSTSVDKLPS---------DLEGMEVLMERLLTLINDIYKYVDDTVEGHAVPDNSVGRILSETVASLPKLSPPAFDKLVNXXXXXXXXXXXXXSITRTQLSLAEKLNT 798
            VNP E IVGW++TG  VT  S++IHE+Y RE  NP+HLT+DT        +KAYV V+L +   +    F  I +++   E E VG  +  K+  V +  S         DL  +    ++LLTL+ ++  YV+D +     PDNSVGR L + + S+P ++   F ++ N              + +TQL L EKL +
Sbjct:   83 VNPSENIVGWWATGQEVTNHSSVIHEYYARECNNPIHLTLDTSLSAARMGIKAYVCVSLGVPGGKTGCMFTPINVEISSYEPEVVGLQLCSKTIGVQQNASRPRTVSPMLDLAQITEASDKLLTLLGEVLNYVEDVLAEKQQPDNSVGRALLDLIHSVPNMTSDQFAQMFNSNVKDLLMVVTLSQLIKTQLQLNEKLTS 281          
BLAST of CF833100 vs. ExPASy Swiss-Prot
Match: EI3F1_DROWI (Eukaryotic translation initiation factor 3 subunit F-1 OS=Drosophila willistoni GN=eIF3-S5-1 PE=3 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 1.515e-25
Identity = 68/197 (34.52%), Postives = 103/197 (52.28%), Query Frame = -3
Query:  238 VNPQEVIVGWFSTGLGVTGGSALIHEFYCREVPNPVHLTVDTGFRNGEGTVKAYVSVNLSLGDRQLAAQFQEIPLDLRMIEAERVGFDILKSTSVDKLPS----------DLEGMEVLMERLLTLINDIYKYVDDTVEGHAVPDNSVGRILSETVASLPKLSPPAFDKLVNXXXXXXXXXXXXXSITRTQLSLAEKL 798
            VN  E +VGW++TG  VT  S++IHE+Y RE  NPVH+TVDT  + G   ++AYV + L +   +    F  IP++L   E E  G  +L+ T V   P+          DL  +     +L +L++ I KYVDD +     PDN+VGR L + + ++P ++   F ++ N              + +TQL L EKL
Sbjct:   79 VNSNESVVGWWATGNEVTNHSSVIHEYYARECNNPVHVTVDTSLQGGRMGLRAYVCIQLGVPGGKSGCMFTPIPVELTSYEPETFGLKLLQKT-VGVSPAHRPKTVPPMLDLAQISEASTKLQSLLDLILKYVDDVIAHKVTPDNAVGRQLLDLIHAVPHMTHEQFTQMFNANVRDLLMVITLSQLIKTQLQLNEKL 274          
BLAST of CF833100 vs. ExPASy Swiss-Prot
Match: EIF3F_ANOGA (Eukaryotic translation initiation factor 3 subunit F OS=Anopheles gambiae GN=eIF3-S5 PE=3 SV=3)

HSP 1 Score: 116.316 bits (290), Expect = 1.978e-25
Identity = 68/199 (34.17%), Postives = 104/199 (52.26%), Query Frame = -3
Query:  232 VNPQEVIVGWFSTGLGVTGGSALIHEFYCREVPNPVHLTVDTGFRNGEGTVKAYVSVNLSLGDRQLAAQFQEIPLDLRMIEAERVGFDI-LKSTSVDKLPS---------DLEGMEVLMERLLTLINDIYKYVDDTVEGHAVPDNSVGRILSETVASLPKLSPPAFDKLVNXXXXXXXXXXXXXSITRTQLSLAEKLNT 798
            VN  E IVGW++TG  VT  S++IHE+Y RE  NPVHLT+DT        +KAYV V+L +   +    F  I +++   E E VG  + +K+  V   PS         DL  +    ++LL L++D+  YV+D +     P+N+VGR L + + S+P ++   F ++ N              + +TQL L EKL +
Sbjct:   83 VNASENIVGWWATGQEVTNHSSVIHEYYARECTNPVHLTLDTSLTGARMGIKAYVCVSLGVPGGKSGCMFTPINVEVTSYEPEIVGLQLCMKTIGVQSNPSRPRTVSPMLDLAQVTDASDKLLALLSDVLAYVEDVLSEKQQPENTVGRALLDLIHSVPNMTGDQFAQMFNSNVKDLLMVVTLSQLIKTQLQLNEKLTS 281          
BLAST of CF833100 vs. ExPASy Swiss-Prot
Match: EIF3F_DICDI (Eukaryotic translation initiation factor 3 subunit F OS=Dictyostelium discoideum GN=eif3f PE=3 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 4.408e-25
Identity = 64/194 (32.99%), Postives = 109/194 (56.19%), Query Frame = -3
Query:  235 NPQEVIVGWFSTGLGVTGGSALIHEFYCREVPN--PVHLTVDTGFRNGEGTVKAYVSVNLSLG-DRQLAAQFQEIPLDLRMIEAERVGFDILKSTSVDK----LPSDLEGMEVLMERLLTLINDIYKYVDDTVEGHAVPDNSVGRILSETVASLPKLSPPAFDKLVNXXXXXXXXXXXXXSITRTQLSLAEKLN 795
            +P+E I+GW++TG  +   S  I+ FY  E+ N  P+HLTVDTG  N    + AY++ NLSL  +  L + F ++PL++   EAE  G + +  T  D+    L S+LE ++  + +L  ++  I  Y++   +G    D  +GR L++T+ +LPK +    DK++N             S+TR+QL++A K++
Sbjct:   86 SPREPIIGWYATGNDINENSVHINNFYRDEMGNSTPIHLTVDTGLTNDTMGIHAYMAHNLSLNPESSLGSYFSQLPLEILTFEAENAGLESIAQTKYDQQSTSLLSELESLQGSLTKLDEMLESITSYIESVEKGEIQGDPRLGRFLAKTIQALPKANAQVMDKVINNSVKDLLMIVYLSSLTRSQLAVATKIS 279          
The following BLAST results are available for this feature:
BLAST of CF833100 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 47
Match NameE-valueIdentityDescription
EI3F1_DROSI2.337e-2635.53Eukaryotic translation initiation factor 3 subunit... [more]
EI3F1_DROSE2.337e-2635.53Eukaryotic translation initiation factor 3 subunit... [more]
EI3F1_DROME2.337e-2635.53Eukaryotic translation initiation factor 3 subunit... [more]
EI3F1_DROER2.337e-2635.53Eukaryotic translation initiation factor 3 subunit... [more]
EI3F1_DROVI3.052e-2635.53Eukaryotic translation initiation factor 3 subunit... [more]
EI3F1_DROMO3.052e-2635.03Eukaryotic translation initiation factor 3 subunit... [more]
EIF3F_AEDAE5.206e-2634.67Eukaryotic translation initiation factor 3 subunit... [more]
EI3F1_DROWI1.515e-2534.52Eukaryotic translation initiation factor 3 subunit... [more]
EIF3F_ANOGA1.978e-2534.17Eukaryotic translation initiation factor 3 subunit... [more]
EIF3F_DICDI4.408e-2532.99Eukaryotic translation initiation factor 3 subunit... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_03A11_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa03A11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF833100 ID=CF833100; Name=CF833100; organism=Citrus sinensis; type=EST; length=800bp
TTTTTTTTTTTTTTTGACCAAAATGGATATTTGTTTCTCAATAGAACCCA
AACCATTACAAAGCAATCTTGTTAAAATTGTGCAACTAATTTAAACTCTA
GCTCATAAAATACAGCCTTTCCAGAAAGTAAATACGCACATTCCTCAGAG
TTTGTGATATATTAATTCAAACTCAAATCGCCTTAGCACATGAATTCATA
TGTCAGCGAGAAATTATGGCATCTGAGCAGCGGTGTTCAACTTTTCTGCT
AAGCTGAGCTGGGTCCTGGTGATACTTGACAAATATAGCAAGAGCAACTG
GTCCTGTAGGCTGTCATTTACAAGCTTGTCAAAAGCTGGAGGTGACAGTT
TGGGAAGGGAGGCTACAGTCTCTGAAAGAATACGCCCTACACTATTATCA
GGTACAGCATGCCCTTCCACAGTGTCATCAACATATTTGTAGATATCGTT
AATAAGAGTTAGTAGCCGTTCCATCAGGACTTCCATTCCTTCCAAATCAC
TAGGGAGTTTGTCAACCGATGTTGACTTCAGAATATCGAATCCAACTCGC
TCAGCTTCAATCATTCGAAGATCAAGAGGGATTTCTTGAAATTGTGCAGC
AAGCTGTCGATCTCCAAGAGACAAATTGACAGAAACATAAGCTTTTACAG
TACCCTCTCCATTTCTGAATCCTGTATCTACAGTCAGGTGGACAGGATTA
GGAACTTCGCGACAATAGAATTCATGGATCAAGGCACTGCCACCAGTGAC
TCCCAACCCTGTAGAAAACCATCCAACAATCACTTCCTGAGGATTCACCC
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