CF833116
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF833116 vs. ExPASy Swiss-Prot
Match: GLYA_MACCJ (Serine hydroxymethyltransferase OS=Macrococcus caseolyticus (strain JCSC5402) GN=glyA PE=3 SV=1) HSP 1 Score: 137.887 bits (346), Expect = 6.909e-32 Identity = 76/184 (41.30%), Postives = 103/184 (55.98%), Query Frame = 2 Query: 11 NPFEYCHIVTTTTHKSLRGPRAGMIFYRXXXXXXXXXXXEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAV-FGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFL 559 NP + VTTTTHK+LRGPR GMI + ++ I+ +FP +QGGP H I A AVA +A T FKAY +QV NA L + LT KG +V+GGT+NH++ D+ +TG E+ D IT NKN + F S G+RIGTPA+T+RG E+D ++I + Sbjct: 212 NPVPHADFVTTTTHKTLRGPRGGMIICKE---------------EYAKAIDKMIFPGIQGGPLMHVIAAKAVAFGEALTADFKAYQQQVVLNAKTLADALTEKGLRIVSGGTDNHVMSIDVTSFNITGKVAERALDDVGITTNKNTIPFDKESPFVTSGIRIGTPAVTTRGFNEEDMKEIASII 380
BLAST of CF833116 vs. ExPASy Swiss-Prot
Match: GLYA_LEPBL (Serine hydroxymethyltransferase OS=Leptospira borgpetersenii serovar Hardjo-bovis (strain L550) GN=glyA PE=3 SV=1) HSP 1 Score: 137.887 bits (346), Expect = 6.909e-32 Identity = 86/236 (36.44%), Postives = 118/236 (50.00%), Query Frame = 2 Query: 11 NPFEYCHIVTTTTHKSLRGPRAGMIFYRXXXXXXXXXXXEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAV-FGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFLHRAVTLTLEIQKEYGKLLKDFNKGLVNNKDIEALKADVEKFASSFDMPGFKM 715 +P VTTTTHK+LRGPR G+I + + E +N VFP +QGGP H I A AVA K+A P +K Y + V ANA L +GY +V+GGT+NHLVL D+ GLTG + D +TVNKNA+ F + G+R+GTPA+T+RGL D E + G L+ DF K+ + +K V++ F M F++ Sbjct: 212 SPVGLFDFVTTTTHKTLRGPRGGLIL---------------STLENEKVLNSRVFPGIQGGPLMHVIAAKAVAFKEALQPEYKKYIEIVLANAKTLAEVFLKRGYRVVSGGTDNHLVLLDVSVKGLTGVQAADGLDEVGVTVNKNAIPFDKNPPAVASGIRLGTPALTTRGLKPADMETV------------------GNLICDFLDNPNEEKNKKRVKGGVQEITRKFPMDQFRL 414
BLAST of CF833116 vs. ExPASy Swiss-Prot
Match: GLYA_LEPBJ (Serine hydroxymethyltransferase OS=Leptospira borgpetersenii serovar Hardjo-bovis (strain JB197) GN=glyA PE=3 SV=1) HSP 1 Score: 137.887 bits (346), Expect = 6.909e-32 Identity = 86/236 (36.44%), Postives = 118/236 (50.00%), Query Frame = 2 Query: 11 NPFEYCHIVTTTTHKSLRGPRAGMIFYRXXXXXXXXXXXEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAV-FGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFLHRAVTLTLEIQKEYGKLLKDFNKGLVNNKDIEALKADVEKFASSFDMPGFKM 715 +P VTTTTHK+LRGPR G+I + + E +N VFP +QGGP H I A AVA K+A P +K Y + V ANA L +GY +V+GGT+NHLVL D+ GLTG + D +TVNKNA+ F + G+R+GTPA+T+RGL D E + G L+ DF K+ + +K V++ F M F++ Sbjct: 212 SPVGLFDFVTTTTHKTLRGPRGGLIL---------------STLENEKVLNSRVFPGIQGGPLMHVIAAKAVAFKEALQPEYKKYIEIVLANAKTLAEVFLKRGYRVVSGGTDNHLVLLDVSVKGLTGVQAADGLDEVGVTVNKNAIPFDKNPPAVASGIRLGTPALTTRGLKPADMETV------------------GNLICDFLDNPNEEKNKKRVKGGVQEITRKFPMDQFRL 414
BLAST of CF833116 vs. ExPASy Swiss-Prot
Match: GLYA_HAES1 (Serine hydroxymethyltransferase OS=Haemophilus somnus (strain 129Pt) GN=glyA PE=3 SV=1) HSP 1 Score: 137.887 bits (346), Expect = 6.909e-32 Identity = 78/184 (42.39%), Postives = 101/184 (54.89%), Query Frame = 2 Query: 11 NPFEYCHIVTTTTHKSLRGPRAGMIFYRXXXXXXXXXXXEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAVFGD-SSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFL 559 +P + H+VTTTTHK+L GPR G+I + K+N AVFP+ QGGP H I A AV K+A P FK Y QV NA A+ +GY++V+ GTENHL L DL GLTG + NITVNKNAV D G+R+GTPA+T RG E+D ++ ++ Sbjct: 215 SPMPHAHVVTTTTHKTLAGPRGGLILANGNE-------------ELYKKLNSAVFPAGQGGPLVHVIAAKAVCFKEALEPEFKTYQAQVVKNAKAMVEVFKQRGYNVVSNGTENHLFLVDLVSHGLTGKAADAALSRANITVNKNAVPNDPQKPFVTSGIRVGTPAVTRRGFNEEDVAELAGWM 385
BLAST of CF833116 vs. ExPASy Swiss-Prot
Match: GLYA_DESAH (Serine hydroxymethyltransferase OS=Desulfobacterium autotrophicum (strain ATCC 43914 / DSM 3382 / HRM2) GN=glyA PE=3 SV=1) HSP 1 Score: 137.887 bits (346), Expect = 6.909e-32 Identity = 77/188 (40.96%), Postives = 109/188 (57.98%), Query Frame = 2 Query: 11 NPFEYCHIVTTTTHKSLRGPRAGMIFYRXXXXXXXXXXXEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAVFGD-SSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFLHRAV 571 +P + IVTTTTHK+LRGPR G+I + + KI+ +FP +QGGP H I A AVALK+A +P+F Y +QV ANA L + L +G LV+ GT+NHL+L +L G++G E ITVNKNAV D + G+RIGTP +T+RG+ E + + + E + +A+ Sbjct: 214 SPVPHADIVTTTTHKTLRGPRGGLIL---------------SSNEIGPKISSQIFPGIQGGPLMHVIAAKAVALKEALSPSFAQYQRQVVANAATLADALMDRGMKLVSNGTDNHLMLLNLTHNGISGKDAENRLGAAGITVNKNAVPNDPRGPMITSGIRIGTPLVTTRGMGETEMDLVAELITQAL 386
BLAST of CF833116 vs. ExPASy Swiss-Prot
Match: GLYA_CAMJE (Serine hydroxymethyltransferase OS=Campylobacter jejuni GN=glyA PE=1 SV=2) HSP 1 Score: 137.887 bits (346), Expect = 6.909e-32 Identity = 85/232 (36.64%), Postives = 118/232 (50.86%), Query Frame = 2 Query: 2 EAANPFEYCHIVTTTTHKSLRGPRAGMIFYRXXXXXXXXXXXEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAVFGD-SSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFLHRAVTLTLEIQKEYGKLLKDFNKGLVNNKDIEALKADVEKFASSF 694 E +PF Y H+V++TTHK+LRGPR G+I + KIN A+FP +QGGP H I A AV K + +K YAKQV+ NA L N L + + LV+ GT+NHLVL +G + IT NKN V G+ S G+R+GTPA+T+RG EK+ E + ++ +L D N N K E +K +++K AS+F Sbjct: 207 EHPSPFPYAHVVSSTTHKTLRGPRGGIIMTNDE--------------ELAKKINSAIFPGIQGGPLMHVIAAKAVGFKFNLSDEWKVYAKQVRTNAQVLANVLMDRKFKLVSDGTDNHLVLMSFLDREFSGKDADLALGNAGITANKNTVPGEIRSPFITSGLRLGTPALTARGFKEKEMEIVSNYI--------------ADILDDVN----NEKLQENIKQELKKLASNF 406
BLAST of CF833116 vs. ExPASy Swiss-Prot
Match: GLYA_BACHK (Serine hydroxymethyltransferase OS=Bacillus thuringiensis subsp. konkukian GN=glyA PE=3 SV=1) HSP 1 Score: 137.887 bits (346), Expect = 6.909e-32 Identity = 90/231 (38.96%), Postives = 117/231 (50.65%), Query Frame = 2 Query: 11 NPFEYCHIVTTTTHKSLRGPRAGMIFYRXXXXXXXXXXXEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAV-FGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFLHRAVTLTLEIQKEYGKLLKDFNKGLVNNKDIEALKADVEKFASSFDM 700 NP + H VTTTTHK+LRGPR GMI F +I+ ++FP +QGGP H I A AVA +A FK YA+ + NA L L +G +LV+GGT+NHL+L D+R L +TG E + D ITVNKN + F +S GVRIGT A+TSRG +D ++I + A TL K N +E + VE S F M Sbjct: 213 NPVPHAHFVTTTTHKTLRGPRGGMILCEE---------------QFAKQIDKSIFPGIQGGPLMHVIAAKAVAFGEALQDDFKTYAQNIINNANRLAEGLQKEGLTLVSGGTDNHLILIDVRNLEITGKVAEHVLDEVGITVNKNTIPFETASPFVTSGVRIGTAAVTSRGFGLEDMDEIASLI--AYTL----------------KNHENEAALEEARKRVEALTSKFPM 410
BLAST of CF833116 vs. ExPASy Swiss-Prot
Match: GLYA_BACC3 (Serine hydroxymethyltransferase OS=Bacillus cereus (strain 03BB102) GN=glyA PE=3 SV=1) HSP 1 Score: 137.887 bits (346), Expect = 6.909e-32 Identity = 90/231 (38.96%), Postives = 117/231 (50.65%), Query Frame = 2 Query: 11 NPFEYCHIVTTTTHKSLRGPRAGMIFYRXXXXXXXXXXXEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAV-FGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFLHRAVTLTLEIQKEYGKLLKDFNKGLVNNKDIEALKADVEKFASSFDM 700 NP + H VTTTTHK+LRGPR GMI F +I+ ++FP +QGGP H I A AVA +A FK YA+ + NA L L +G +LV+GGT+NHL+L D+R L +TG E + D ITVNKN + F +S GVRIGT A+TSRG +D ++I + A TL K N +E + VE S F M Sbjct: 212 NPVPHAHFVTTTTHKTLRGPRGGMILCEE---------------QFAKQIDKSIFPGIQGGPLMHVIAAKAVAFGEALQDDFKTYAQNIINNANRLAEGLQKEGLTLVSGGTDNHLILIDVRNLEITGKVAEHVLDEVGITVNKNTIPFETASPFVTSGVRIGTAAVTSRGFGLEDMDEIASLI--AYTL----------------KNHENEAALEEARKRVEALTSKFPM 409
BLAST of CF833116 vs. ExPASy Swiss-Prot
Match: GLYA_BACC0 (Serine hydroxymethyltransferase OS=Bacillus cereus (strain AH820) GN=glyA PE=3 SV=1) HSP 1 Score: 137.887 bits (346), Expect = 6.909e-32 Identity = 90/231 (38.96%), Postives = 117/231 (50.65%), Query Frame = 2 Query: 11 NPFEYCHIVTTTTHKSLRGPRAGMIFYRXXXXXXXXXXXEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAV-FGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFLHRAVTLTLEIQKEYGKLLKDFNKGLVNNKDIEALKADVEKFASSFDM 700 NP + H VTTTTHK+LRGPR GMI F +I+ ++FP +QGGP H I A AVA +A FK YA+ + NA L L +G +LV+GGT+NHL+L D+R L +TG E + D ITVNKN + F +S GVRIGT A+TSRG +D ++I + A TL K N +E + VE S F M Sbjct: 212 NPVPHAHFVTTTTHKTLRGPRGGMILCEE---------------QFAKQIDKSIFPGIQGGPLMHVIAAKAVAFGEALQDDFKTYAQNIINNANRLAEGLQKEGLTLVSGGTDNHLILIDVRNLEITGKVAEHVLDEVGITVNKNTIPFETASPFVTSGVRIGTAAVTSRGFGLEDMDEIASLI--AYTL----------------KNHENEAALEEARKRVEALTSKFPM 409
BLAST of CF833116 vs. ExPASy Swiss-Prot
Match: GLYA_BACAN (Serine hydroxymethyltransferase OS=Bacillus anthracis GN=glyA PE=3 SV=1) HSP 1 Score: 137.887 bits (346), Expect = 6.909e-32 Identity = 90/231 (38.96%), Postives = 117/231 (50.65%), Query Frame = 2 Query: 11 NPFEYCHIVTTTTHKSLRGPRAGMIFYRXXXXXXXXXXXEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAV-FGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFLHRAVTLTLEIQKEYGKLLKDFNKGLVNNKDIEALKADVEKFASSFDM 700 NP + H VTTTTHK+LRGPR GMI F +I+ ++FP +QGGP H I A AVA +A FK YA+ + NA L L +G +LV+GGT+NHL+L D+R L +TG E + D ITVNKN + F +S GVRIGT A+TSRG +D ++I + A TL K N +E + VE S F M Sbjct: 212 NPVPHAHFVTTTTHKTLRGPRGGMILCEE---------------QFAKQIDKSIFPGIQGGPLMHVIAAKAVAFGEALQDDFKTYAQNIINNANRLAEGLQKEGLTLVSGGTDNHLILIDVRNLEITGKVAEHVLDEVGITVNKNTIPFETASPFVTSGVRIGTAAVTSRGFGLEDMDEIASLI--AYTL----------------KNHENEAALEEARKRVEALTSKFPM 409 The following BLAST results are available for this feature:
BLAST of CF833116 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CF833116 ID=CF833116; Name=CF833116; organism=Citrus sinensis; type=EST; length=846bpback to top |