CF834243

Overview
NameCF834243
Unique NameCF834243
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length609
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF834243 vs. ExPASy Swiss-Prot
Match: C71BG_ARATH (Cytochrome P450 71B16 OS=Arabidopsis thaliana GN=CYP71B16 PE=2 SV=1)

HSP 1 Score: 136.732 bits (343), Expect = 8.669e-32
Identity = 62/131 (47.33%), Postives = 84/131 (64.12%), Query Frame = -2
Query:  210 DFQNLHYLQCVVKESMRLHPPTPLMLPHKANADVKISGYNVPKGSVVHVNVWAIGRDPADWKNPLEFRPERFLEEDIDMKGHDYRLLPFGSGRRICPGIQLGINLVTSMLGHLLHHFWWAPAKGVKPEEID 602
            D   + +L  V+KE+ RLHP  PL+LP +    +K+ GY++P    + VN WAIGRDP  W NP EF PERF+   +D +G  + LLPFGSGRRICPG+ LGI +V   L +LL+ F W    G+  ++ID
Sbjct:  349 DLNKVPFLNMVIKETFRLHPVAPLLLPRETMTHIKVQGYDIPPKRRILVNTWAIGRDPTLWINPEEFNPERFINNPVDYRGQHFELLPFGSGRRICPGMGLGITIVELGLLNLLYFFDWRAPDGMTHKDID 479          
BLAST of CF834243 vs. ExPASy Swiss-Prot
Match: C71DC_CATRO (Tabersonine 16-hydroxylase (Fragment) OS=Catharanthus roseus GN=CYP71D12 PE=1 SV=1)

HSP 1 Score: 136.346 bits (342), Expect = 1.132e-31
Identity = 62/121 (51.24%), Postives = 75/121 (61.98%), Query Frame = -2
Query:  246 EADFQNLHYLQCVVKESMRLHPPTPLMLPHKANADVKISGYNVPKGSVVHVNVWAIGRDPADWKNPLEFRPERFLEEDIDMKGHDYRLLPFGSGRRICPGIQLGINLVTSMLGHLLHHFWW 608
            E     L YLQ V+KE++RLHPP PL+LP +     KI GY +P  S V VN WAIGRDP  W  P +F P+RFLE  +D KG+ +  LPFG GRRICPGI   +  +   L  LL HF W
Sbjct:  339 ETKLHQLKYLQAVIKETLRLHPPVPLLLPRECREQCKIKGYTIPSKSRVIVNAWAIGRDPNYWIEPEKFNPDRFLESKVDFKGNSFEYLPFGGGRRICPGITFALANIELPLAQLLFHFDW 459          
BLAST of CF834243 vs. ExPASy Swiss-Prot
Match: C82A2_SOYBN (Cytochrome P450 82A2 OS=Glycine max GN=CYP82A2 PE=2 SV=1)

HSP 1 Score: 135.961 bits (341), Expect = 1.479e-31
Identity = 74/159 (46.54%), Postives = 92/159 (57.86%), Query Frame = -2
Query:  138 EADFQNLHYLQCVVKESMRLHPPTPLMLPHKANADVKISGYNVPKGSVVHVNVWAIGRDPADWKNPLEFRPERFL--EEDIDMKGHDYRLLPFGSGRRICPGIQLGINLVTSMLGHLLHHFWWAPAKGVKPEEIDMAGNPGQVTYMTTPLEVVATPRLA 608
            E+D   L YLQ VVKE++RL+PP PL  P +   D  I GY V KG+ +  N+  I  D   W NPLEF+PERFL  ++DIDMKG  ++LLPFG GRRICPGI LG+  V   L   LH F          E +DM           TPLE++  PRL+
Sbjct:  360 ESDLSKLTYLQAVVKETLRLYPPAPLSRPREFEEDCTIGGYTVKKGTRLITNLSKIHTDHNVWSNPLEFKPERFLTTDKDIDMKGQHFQLLPFGGGRRICPGINLGLQTVRLTLASFLHSF---EILNPSTEPLDMTEVFRATNTKATPLEILIKPRLS 515          
BLAST of CF834243 vs. ExPASy Swiss-Prot
Match: C7D95_MENSP (Cytochrome P450 71D95 OS=Mentha spicata GN=CYP71D95 PE=1 SV=1)

HSP 1 Score: 135.961 bits (341), Expect = 1.479e-31
Identity = 63/151 (41.72%), Postives = 93/151 (61.59%), Query Frame = -2
Query:  150 DFQNLHYLQCVVKESMRLHPPTPLMLPHKANADVKISGYNVPKGSVVHVNVWAIGRDPADWKNPLEFRPERFLEEDIDMKGHDYRLLPFGSGRRICPGIQLGINLVTSMLGHLLHHFWWAPAKGVKPEEIDMAGNPGQVTYMTTPLEVVAT 602
            D Q L Y++ VVKE+MR+HPP PL +P     + +++GY +P  + + +NVW++GR+P  W+ P  F PERF +   D  G D+  +PFG+GRRICPG+  G+  V   L  LL+HF W  A+G+KP ++DM+   G        L +V T
Sbjct:  342 DVQELKYMKSVVKETMRMHPPIPL-IPRSCREECEVNGYKIPNKARIMINVWSMGRNPLYWEKPETFWPERFDQVSRDFMGSDFEFIPFGAGRRICPGLNFGLANVEVPLAQLLYHFDWKLAEGMKPSDMDMSEAEGLTGIRKNNLLLVPT 491          
BLAST of CF834243 vs. ExPASy Swiss-Prot
Match: C71C1_MAIZE (Cytochrome P450 71C1 OS=Zea mays GN=CYP71C1 PE=2 SV=1)

HSP 1 Score: 135.576 bits (340), Expect = 1.931e-31
Identity = 71/162 (43.83%), Postives = 97/162 (59.88%), Query Frame = -2
Query:  141 EADFQNLHYLQCVVKESMRLHPPTPLMLPHKANADVKISGYNVPKGSVVHVNVWAIGRDPADWKNPLEFRPERFLEE----DIDMKGHDYRLLPFGSGRRICPGIQLGINLVTSMLGHLLHHF-WWAPAKGVKP-EEIDMAGNPGQVTYMTTPLEVVATPRL 608
            E D   + YL+  +KESMR+HPP P +LPH +  D +I+GY +P G+ V VN WA+ RDP  W    EF PERFLE+    ++DM G D R +PFG+GRRIC G    I  V  ML +L++HF W  PA+  +   ++DM+   G     T  L +V  PR+
Sbjct:  369 EEDLSRMPYLKATIKESMRIHPPAPFLLPHFSTHDCEINGYTIPAGTRVIVNAWALARDPTCWDKAEEFFPERFLEQGRDAEVDMYGKDIRFVPFGAGRRICAGATFAIATVEIMLANLIYHFDWEMPAEMERTGAKVDMSDQFGMTLRRTQKLYLV--PRI 528          
BLAST of CF834243 vs. ExPASy Swiss-Prot
Match: C71D6_SOLCH (Cytochrome P450 71D6 OS=Solanum chacoense GN=CYP71D6 PE=2 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 2.522e-31
Identity = 65/154 (42.21%), Postives = 94/154 (61.04%), Query Frame = -2
Query:  147 EADFQNLHYLQCVVKESMRLHPPTPLMLPHKANADVKISGYNVPKGSVVHVNVWAIGRDPADWKNPLEFRPERFLEEDIDMKGHDYRLLPFGSGRRICPGIQLGINLVTSMLGHLLHHFWWAPAKGVKPEEIDMAGNPGQVTYMTTPLEVVATP 608
            E D ++L YL+ V+KE+MRLH P PL++P +   + +I+GY +P  + V VNVWA+GRDP  W +   F+PERF +  ID  G+++  LPFG GRRICPG   G+      L  LL HF W    G++P+++D+    G        L ++ATP
Sbjct:  345 ENDVEDLKYLKLVIKETMRLHAPIPLLVPRECRKETEINGYTIPVKTKVMVNVWALGRDPKYWDDVECFKPERFEQCSIDFIGNNFEYLPFGGGRRICPGTSFGLANDYLPLAQLLCHFDWKLPTGMEPKDLDLTELAGMSAASKDDLYLIATP 498          
BLAST of CF834243 vs. ExPASy Swiss-Prot
Match: C71BS_ARATH (Cytochrome P450 71B28 OS=Arabidopsis thaliana GN=CYP71B28 PE=2 SV=1)

HSP 1 Score: 134.42 bits (337), Expect = 4.302e-31
Identity = 65/137 (47.45%), Postives = 90/137 (65.69%), Query Frame = -2
Query:  198 EADFQNLHYLQCVVKESMRLHPPTPLMLPHKANADVKISGYNVPKGSVVHVNVWAIGRDPADWKNPLEFRPERFLEEDIDMKGHDYRLLPFGSGRRICPGIQLGINLVTSMLGHLLHHFWWAPAKGVKPEEIDMAGN 608
            E D   LHY + +VKE  RLHP  PL+LP +  + VKI GY++P  + + +N +AI RDP  W NP EF P+RFL+  ID +G ++ LLPFGSGRRICPG+ +GI +V   L +LL+ F W   +  + +EI + GN
Sbjct:  343 EEDLNQLHYFKLMVKEIFRLHPAAPLLLPRETLSHVKIQGYDIPAKTQIMINAYAIARDPKLWTNPDEFNPDRFLDSSIDYRGLNFELLPFGSGRRICPGMTMGIAIVELGLLNLLYFFDWGLPEKEEAKEI-ITGN 478          
BLAST of CF834243 vs. ExPASy Swiss-Prot
Match: C71BH_ARATH (Cytochrome P450 71B17 OS=Arabidopsis thaliana GN=CYP71B17 PE=2 SV=1)

HSP 1 Score: 133.65 bits (335), Expect = 7.339e-31
Identity = 60/131 (45.80%), Postives = 86/131 (65.65%), Query Frame = -2
Query:  210 DFQNLHYLQCVVKESMRLHPPTPLMLPHKANADVKISGYNVPKGSVVHVNVWAIGRDPADWKNPLEFRPERFLEEDIDMKGHDYRLLPFGSGRRICPGIQLGINLVTSMLGHLLHHFWWAPAKGVKPEEID 602
            D   + +L  V+KE+ RLHP  PL+LP +  A VK+ GY++P    + VN WAIGRDP  W +P EF+PERF++  +D +G  + LLPFGSGRRICPG+ +G+  +   L +LL+ F W    G+  ++ID
Sbjct:  349 DLDKVPFLNLVIKETFRLHPVAPLLLPRETMAHVKVQGYDIPPKRRILVNAWAIGRDPKLWTDPEEFKPERFIDSPVDYRGQHFELLPFGSGRRICPGMAMGMATLELGLLNLLYFFDWKLPDGMSHKDID 479          
BLAST of CF834243 vs. ExPASy Swiss-Prot
Match: C99A1_SORBI (Cytochrome P450 CYP99A1 (Fragment) OS=Sorghum bicolor GN=CYP99A1 PE=2 SV=1)

HSP 1 Score: 133.265 bits (334), Expect = 9.584e-31
Identity = 64/161 (39.75%), Postives = 90/161 (55.90%), Query Frame = -2
Query:  147 EADFQNLHYLQCVVKESMRLHPPTPLMLPHKANADVKISGYNVPKGSVVHVNVWAIGRDPADWKNPLEFRPERFLEED-------IDMKGHDYRLLPFGSGRRICPGIQLGINLVTSMLGHLLHHFWWAPAKGVKPEEIDMAGNPGQVTYMTTPLEVVATP 608
            E     L Y + VVKE +RLHP  PL+LP        + G+ V KG+ V VN WA+ R P  W +P EFRPERF ++D       +D +G  +  +PFGSGRR+CPG   G+  +  M+  LL++F W+   G++PEE+DM    G        L +V +P
Sbjct:  349 EGQMDKLSYTRMVVKEGLRLHPVLPLLLPRSCQETCDVGGFEVTKGTKVIVNAWALARSPERWHDPEEFRPERFADDDGSSAAVAVDYRGSQFEYIPFGSGRRMCPGNTFGLAALELMVARLLYYFDWSLPDGMRPEELDMDTVVGSTMRRRNHLHLVPSP 509          
BLAST of CF834243 vs. ExPASy Swiss-Prot
Match: C7D94_MENGR (Cytochrome P450 71D94 OS=Mentha gracilis GN=CYP71D94 PE=2 SV=1)

HSP 1 Score: 132.88 bits (333), Expect = 1.252e-30
Identity = 59/138 (42.75%), Postives = 92/138 (66.67%), Query Frame = -2
Query:  192 ADFQNLHYLQCVVKESMRLHPPTPLMLPHKANADVKISGYNVPKGSVVHVNVWAIGRDPADWKNPLEFRPERFLEEDIDMKGHDYRLLPFGSGRRICPGIQLGINLVTSMLGHLLHHFWWAPAKGVKPEEIDMAGNPG 605
            ++ Q L Y++ VVKE++RLHPP PL +P ++  + +I+G+ +P  + + +N W+IGRDP  W++P  FRPERF E   D  G+D+  +PFG+G+RICPG+  G+  V   L  LL+HF W   +G+   ++ +AG PG
Sbjct:  339 SEMQELKYMRSVVKETLRLHPPFPL-IPRQSREECEINGFYIPARTRILINAWSIGRDPLYWEDPDTFRPERFDEVSRDFMGNDFEFIPFGAGQRICPGLHFGLANVEIPLAQLLYHFDWKLPQGMTDADLYVAGTPG 475          
The following BLAST results are available for this feature:
BLAST of CF834243 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 387
Match NameE-valueIdentityDescription
C71BG_ARATH8.669e-3247.33Cytochrome P450 71B16 OS=Arabidopsis thaliana GN=C... [more]
C71DC_CATRO1.132e-3151.24Tabersonine 16-hydroxylase (Fragment) OS=Catharant... [more]
C82A2_SOYBN1.479e-3146.54Cytochrome P450 82A2 OS=Glycine max GN=CYP82A2 PE=... [more]
C7D95_MENSP1.479e-3141.72Cytochrome P450 71D95 OS=Mentha spicata GN=CYP71D9... [more]
C71C1_MAIZE1.931e-3143.83Cytochrome P450 71C1 OS=Zea mays GN=CYP71C1 PE=2 S... [more]
C71D6_SOLCH2.522e-3142.21Cytochrome P450 71D6 OS=Solanum chacoense GN=CYP71... [more]
C71BS_ARATH4.302e-3147.45Cytochrome P450 71B28 OS=Arabidopsis thaliana GN=C... [more]
C71BH_ARATH7.339e-3145.80Cytochrome P450 71B17 OS=Arabidopsis thaliana GN=C... [more]
C99A1_SORBI9.584e-3139.75Cytochrome P450 CYP99A1 (Fragment) OS=Sorghum bico... [more]
C7D94_MENGR1.252e-3042.75Cytochrome P450 71D94 OS=Mentha gracilis GN=CYP71D... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_05C22_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa05C22, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF834243 ID=CF834243; Name=CF834243; organism=Citrus sinensis; type=EST; length=609bp
TTTTTTTTTTTTTTTTTGAAGAAAAGAAGGGCGCTCAGGTTTACTCATTT
GCCAAAAAACAAGGAACCATATTTTATCACACGACAAACTTAATTAAATC
ACATGTCCACAAGGACACGTTTGTACAGGCCATGATCAGCCAACCGCGGG
GTAGCCACAACCTCAAGGGGTGTGGTCATGTACGTGACCTGTCCAGGGTT
CCCGGCCATATCAATTTCCTCAGGCTTCACTCCTTTAGCCGGTGCCCACC
AAAAATGGTGCAAAAGATGACCCAACATCGAGGTCACTAAATTTATGCCA
AGTTGTATGCCGGGACAAATTCTTCTCCCCGAACCAAATGGTAACAATCG
ATAATCGTGTCCTTTCATGTCAATGTCCTCCTCTAAGAACCTCTCAGGCC
TAAATTCCAACGGGTTTTTCCAATCAGCAGGGTCTCTGCCTATGGCCCAA
ACGTTTACATGTACGACTGATCCTTTCGGGACGTTGTAGCCGCTGATTTT
TACATCGGCGTTGGCTTTGTGGGGCAACATTAGAGGCGTTGGTGGGTGTA
ACCGCATTGATTCTTTGACCACGCACTGGAGATAGTGCAGGTTTTGAAAG
TCTGCTTCT
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