CF834295

Overview
NameCF834295
Unique NameCF834295
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length598
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CF834295 vs. ExPASy Swiss-Prot
Match: METK_NEIMA (S-adenosylmethionine synthetase OS=Neisseria meningitidis serogroup A GN=metK PE=3 SV=1)

HSP 1 Score: 132.88 bits (333), Expect = 1.211e-30
Identity = 65/117 (55.56%), Postives = 86/117 (73.50%), Query Frame = -2 
Query:  241 HGGCAFFGKDPPKVDRTGAYIVRQAAKSIVASGLAPRCIVQVSYAIGVPEPLSLFVDSYGTGKIPDKEILKIVKESSDFRPGMMTINLDLKRGGNGRFLKPAAYGHFGRDDPDFTWE 591
            HGG AF GKDP KVDR+ AY  R  AK+IVA+GLA +C +QVSYAIGV EP S+ +D++GTGKI +++++ +V+E  D RP  +   LDL R     + K AAYGHFGR++P+FTWE
Sbjct:  262 HGGGAFSGKDPSKVDRSAAYACRYVAKNIVAAGLATQCQIQVSYAIGVAEPTSISIDTFGTGKISEEKLITLVREHFDLRPKGIVQMLDLLR---PIYSKSAAYGHFGREEPEFTWE 375
[Close]
BLAST of CF834295 vs. ExPASy Swiss-Prot
Match: METK_NEIM0 (S-adenosylmethionine synthetase OS=Neisseria meningitidis serogroup C (strain 053442) GN=metK PE=3 SV=1)

HSP 1 Score: 132.88 bits (333), Expect = 1.211e-30
Identity = 65/117 (55.56%), Postives = 86/117 (73.50%), Query Frame = -2 
Query:  241 HGGCAFFGKDPPKVDRTGAYIVRQAAKSIVASGLAPRCIVQVSYAIGVPEPLSLFVDSYGTGKIPDKEILKIVKESSDFRPGMMTINLDLKRGGNGRFLKPAAYGHFGRDDPDFTWE 591
            HGG AF GKDP KVDR+ AY  R  AK+IVA+GLA +C +QVSYAIGV EP S+ +D++GTGKI +++++ +V+E  D RP  +   LDL R     + K AAYGHFGR++P+FTWE
Sbjct:  262 HGGGAFSGKDPSKVDRSAAYACRYVAKNIVAAGLATQCQIQVSYAIGVAEPTSISIDTFGTGKISEEKLITLVREHFDLRPKGIVQMLDLLR---PIYSKSAAYGHFGREEPEFTWE 375
[Close]
BLAST of CF834295 vs. ExPASy Swiss-Prot
Match: METK_PELCD (S-adenosylmethionine synthetase OS=Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1) GN=metK PE=3 SV=1)

HSP 1 Score: 132.494 bits (332), Expect = 1.581e-30
Identity = 64/119 (53.78%), Postives = 86/119 (72.27%), Query Frame = -2 
Query:  241 GAHGGCAFFGKDPPKVDRTGAYIVRQAAKSIVASGLAPRCIVQVSYAIGVPEPLSLFVDSYGTGKIPDKEILKIVKESSDFRPGMMTINLDLKRGGNGRFLKPAAYGHFGRDDPDFTWE 597
            G+HGG AF GKDP KVDR+ +Y+ R  AK++VA+ LA +C VQ++YAIGV EP+S+ V+++GTG +P  EI +IV+E  D RP  +   LDL R     + K AAYGHFGR+ P+FTWE
Sbjct:  260 GSHGGGAFSGKDPSKVDRSASYMARYVAKNVVAAKLARKCEVQIAYAIGVAEPVSIMVNTFGTGVLPSNEIARIVREEFDMRPAAIIETLDLLR---PIYRKTAAYGHFGRELPEFTWE 375
[Close]
BLAST of CF834295 vs. ExPASy Swiss-Prot
Match: METK_FRATW (S-adenosylmethionine synthetase OS=Francisella tularensis subsp. tularensis (strain WY96-3418) GN=metK PE=3 SV=1)

HSP 1 Score: 132.494 bits (332), Expect = 1.581e-30
Identity = 68/119 (57.14%), Postives = 87/119 (73.11%), Query Frame = -2 
Query:  235 HGGCAFFGKDPPKVDRTGAYIVRQAAKSIVASGLAPRCIVQVSYAIGVPEPLSLFVDSYGTGKIPDKEILKIVKESSDFRPGMMTINLDLKRGGNGRFLKPAAYGHFGRDDPDFTWEVV 591
            HGG AF GKDP KVDR+GAY+ R  AK+IVA+GLA +C VQV+YAIGV +P+SL V+++GTGKI D +I K+V E  D R G +  NLDL R     + K + YGHFGR+ P+FTWE +
Sbjct:  259 HGGGAFSGKDPSKVDRSGAYMGRYIAKNIVAAGLADKCEVQVAYAIGVAKPVSLMVNTFGTGKITDNQIEKLVAEVFDLRVGKIIENLDLLR---PIYRKTSNYGHFGRELPEFTWEKI 374
[Close]
BLAST of CF834295 vs. ExPASy Swiss-Prot
Match: METK_FRATT (S-adenosylmethionine synthetase OS=Francisella tularensis subsp. tularensis GN=metK PE=3 SV=1)

HSP 1 Score: 132.494 bits (332), Expect = 1.581e-30
Identity = 68/119 (57.14%), Postives = 87/119 (73.11%), Query Frame = -2 
Query:  235 HGGCAFFGKDPPKVDRTGAYIVRQAAKSIVASGLAPRCIVQVSYAIGVPEPLSLFVDSYGTGKIPDKEILKIVKESSDFRPGMMTINLDLKRGGNGRFLKPAAYGHFGRDDPDFTWEVV 591
            HGG AF GKDP KVDR+GAY+ R  AK+IVA+GLA +C VQV+YAIGV +P+SL V+++GTGKI D +I K+V E  D R G +  NLDL R     + K + YGHFGR+ P+FTWE +
Sbjct:  259 HGGGAFSGKDPSKVDRSGAYMGRYIAKNIVAAGLADKCEVQVAYAIGVAKPVSLMVNTFGTGKITDNQIEKLVAEVFDLRVGKIIENLDLLR---PIYRKTSNYGHFGRELPEFTWEKI 374
[Close]
BLAST of CF834295 vs. ExPASy Swiss-Prot
Match: METK_FRATO (S-adenosylmethionine synthetase OS=Francisella tularensis subsp. holarctica (strain OSU18) GN=metK PE=3 SV=1)

HSP 1 Score: 132.494 bits (332), Expect = 1.581e-30
Identity = 68/119 (57.14%), Postives = 87/119 (73.11%), Query Frame = -2 
Query:  235 HGGCAFFGKDPPKVDRTGAYIVRQAAKSIVASGLAPRCIVQVSYAIGVPEPLSLFVDSYGTGKIPDKEILKIVKESSDFRPGMMTINLDLKRGGNGRFLKPAAYGHFGRDDPDFTWEVV 591
            HGG AF GKDP KVDR+GAY+ R  AK+IVA+GLA +C VQV+YAIGV +P+SL V+++GTGKI D +I K+V E  D R G +  NLDL R     + K + YGHFGR+ P+FTWE +
Sbjct:  259 HGGGAFSGKDPSKVDRSGAYMGRYIAKNIVAAGLADKCEVQVAYAIGVAKPVSLMVNTFGTGKITDNQIEKLVAEVFDLRVGKIIENLDLLR---PIYRKTSNYGHFGRELPEFTWEKI 374
[Close]
BLAST of CF834295 vs. ExPASy Swiss-Prot
Match: METK_FRATN (S-adenosylmethionine synthetase OS=Francisella tularensis subsp. novicida (strain U112) GN=metK PE=3 SV=1)

HSP 1 Score: 132.494 bits (332), Expect = 1.581e-30
Identity = 68/119 (57.14%), Postives = 87/119 (73.11%), Query Frame = -2 
Query:  235 HGGCAFFGKDPPKVDRTGAYIVRQAAKSIVASGLAPRCIVQVSYAIGVPEPLSLFVDSYGTGKIPDKEILKIVKESSDFRPGMMTINLDLKRGGNGRFLKPAAYGHFGRDDPDFTWEVV 591
            HGG AF GKDP KVDR+GAY+ R  AK+IVA+GLA +C VQV+YAIGV +P+SL V+++GTGKI D +I K+V E  D R G +  NLDL R     + K + YGHFGR+ P+FTWE +
Sbjct:  259 HGGGAFSGKDPSKVDRSGAYMGRYIAKNIVAAGLADKCEVQVAYAIGVAKPVSLMVNTFGTGKITDNQIEKLVAEVFDLRVGKIIENLDLLR---PIYRKTSNYGHFGRELPEFTWEKI 374
[Close]
BLAST of CF834295 vs. ExPASy Swiss-Prot
Match: METK_FRATM (S-adenosylmethionine synthetase OS=Francisella tularensis subsp. mediasiatica (strain FSC147) GN=metK PE=3 SV=1)

HSP 1 Score: 132.494 bits (332), Expect = 1.581e-30
Identity = 68/119 (57.14%), Postives = 87/119 (73.11%), Query Frame = -2 
Query:  235 HGGCAFFGKDPPKVDRTGAYIVRQAAKSIVASGLAPRCIVQVSYAIGVPEPLSLFVDSYGTGKIPDKEILKIVKESSDFRPGMMTINLDLKRGGNGRFLKPAAYGHFGRDDPDFTWEVV 591
            HGG AF GKDP KVDR+GAY+ R  AK+IVA+GLA +C VQV+YAIGV +P+SL V+++GTGKI D +I K+V E  D R G +  NLDL R     + K + YGHFGR+ P+FTWE +
Sbjct:  259 HGGGAFSGKDPSKVDRSGAYMGRYIAKNIVAAGLADKCEVQVAYAIGVAKPVSLMVNTFGTGKITDNQIEKLVAEVFDLRVGKIIENLDLLR---PIYRKTSNYGHFGRELPEFTWEKI 374
[Close]
BLAST of CF834295 vs. ExPASy Swiss-Prot
Match: METK_FRATH (S-adenosylmethionine synthetase OS=Francisella tularensis subsp. holarctica (strain LVS) GN=metK PE=3 SV=1)

HSP 1 Score: 132.494 bits (332), Expect = 1.581e-30
Identity = 68/119 (57.14%), Postives = 87/119 (73.11%), Query Frame = -2 
Query:  235 HGGCAFFGKDPPKVDRTGAYIVRQAAKSIVASGLAPRCIVQVSYAIGVPEPLSLFVDSYGTGKIPDKEILKIVKESSDFRPGMMTINLDLKRGGNGRFLKPAAYGHFGRDDPDFTWEVV 591
            HGG AF GKDP KVDR+GAY+ R  AK+IVA+GLA +C VQV+YAIGV +P+SL V+++GTGKI D +I K+V E  D R G +  NLDL R     + K + YGHFGR+ P+FTWE +
Sbjct:  259 HGGGAFSGKDPSKVDRSGAYMGRYIAKNIVAAGLADKCEVQVAYAIGVAKPVSLMVNTFGTGKITDNQIEKLVAEVFDLRVGKIIENLDLLR---PIYRKTSNYGHFGRELPEFTWEKI 374
[Close]
BLAST of CF834295 vs. ExPASy Swiss-Prot
Match: METK_FRATF (S-adenosylmethionine synthetase OS=Francisella tularensis subsp. holarctica (strain FTNF002-00 / FTA) GN=metK PE=3 SV=1)

HSP 1 Score: 132.494 bits (332), Expect = 1.581e-30
Identity = 68/119 (57.14%), Postives = 87/119 (73.11%), Query Frame = -2 
Query:  235 HGGCAFFGKDPPKVDRTGAYIVRQAAKSIVASGLAPRCIVQVSYAIGVPEPLSLFVDSYGTGKIPDKEILKIVKESSDFRPGMMTINLDLKRGGNGRFLKPAAYGHFGRDDPDFTWEVV 591
            HGG AF GKDP KVDR+GAY+ R  AK+IVA+GLA +C VQV+YAIGV +P+SL V+++GTGKI D +I K+V E  D R G +  NLDL R     + K + YGHFGR+ P+FTWE +
Sbjct:  259 HGGGAFSGKDPSKVDRSGAYMGRYIAKNIVAAGLADKCEVQVAYAIGVAKPVSLMVNTFGTGKITDNQIEKLVAEVFDLRVGKIIENLDLLR---PIYRKTSNYGHFGRELPEFTWEKI 374
The following BLAST results are available for this feature:
BLAST of CF834295 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK_NEIMA1.211e-3055.56S-adenosylmethionine synthetase OS=Neisseria menin... [more]
METK_NEIM01.211e-3055.56S-adenosylmethionine synthetase OS=Neisseria menin... [more]
METK_PELCD1.581e-3053.78S-adenosylmethionine synthetase OS=Pelobacter carb... [more]
METK_FRATW1.581e-3057.14S-adenosylmethionine synthetase OS=Francisella tul... [more]
METK_FRATT1.581e-3057.14S-adenosylmethionine synthetase OS=Francisella tul... [more]
METK_FRATO1.581e-3057.14S-adenosylmethionine synthetase OS=Francisella tul... [more]
METK_FRATN1.581e-3057.14S-adenosylmethionine synthetase OS=Francisella tul... [more]
METK_FRATM1.581e-3057.14S-adenosylmethionine synthetase OS=Francisella tul... [more]
METK_FRATH1.581e-3057.14S-adenosylmethionine synthetase OS=Francisella tul... [more]
METK_FRATF1.581e-3057.14S-adenosylmethionine synthetase OS=Francisella tul... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_05E14_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa05E14, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF834295 ID=CF834295; Name=CF834295; organism=Citrus sinensis; type=EST; length=598bp
GGAACATTAAACCAAAACCAAAAAAGACCTCGGGGAAAGAAGAAAAAGAA
AGGAATTGAATGGGGAACATGTATGAGTTCCGAACACAGGAGATTTGCTT
AGTATTACAAAGCAGCAGCAAGATAATATTCAAATTATTCATCCACTACC
AATAGAAGCAAACTTGAACAGGAGGGATAGTTTGCACTTTTCAACTCAAA
TTTAAGCTTGAGGCTTTTCCCACTTGAGGGGCTTCACAACTTCCCAAGTG
AAGTCTGGGTCATCCCTGCCAAAGTGTCCATAGGCAGCAGGCTTCAAGAA
CCTGCCATTACCGCCCCTTTTGAGATCCAAATTGATGGTCATCATTCCTG
GCCTGAAATCAGAGCTTTCCTTCACAATTTTGAGGATCTCCTTGTCAGGA
ATCTTGCCGGTTCCATATGAGTCCACAAAAAGAGACAATGGCTCAGGCAC
ACCTATGGCATACGAGACTTGGACAATGCACCTGGGAGCAAGCCCGCTTG
CAACAATGCTCTTAGCAGCCTGCCTAACAATGTATGCACCAGTCCTATCC
ACCTTAGGAGGGTCTTTTCCAAAGAAAGCACAGCCACCATGGGCTCCC
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