CF834295

Overview
NameCF834295
Unique NameCF834295
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length598
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF834295 vs. ExPASy Swiss-Prot
Match: METK_POLSQ (S-adenosylmethionine synthetase OS=Polynucleobacter sp. (strain QLW-P1DMWA-1) GN=metK PE=3 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 6.008e-30
Identity = 63/117 (53.85%), Postives = 86/117 (73.50%), Query Frame = -2
Query:  241 HGGCAFFGKDPPKVDRTGAYIVRQAAKSIVASGLAPRCIVQVSYAIGVPEPLSLFVDSYGTGKIPDKEILKIVKESSDFRPGMMTINLDLKRGGNGRFLKPAAYGHFGRDDPDFTWE 591
            HGG AF GKDP KVDR+ AY  R  AK++VA+GLA +C++Q+SYAIGV +P S+ V ++GTGKI D++I ++V E+ D RP  +   L+L R     + K AAYGHFGR++P+FTWE
Sbjct:  261 HGGGAFSGKDPSKVDRSAAYAGRYVAKNVVAAGLASKCLIQISYAIGVAKPTSVMVSTFGTGKISDEKIAQLVSENFDLRPKGIVKMLNLLR---PIYRKTAAYGHFGREEPEFTWE 374          
BLAST of CF834295 vs. ExPASy Swiss-Prot
Match: METK_DESVV (S-adenosylmethionine synthetase OS=Desulfovibrio vulgaris subsp. vulgaris (strain DP4) GN=metK PE=3 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 6.008e-30
Identity = 65/119 (54.62%), Postives = 83/119 (69.75%), Query Frame = -2
Query:  241 GAHGGCAFFGKDPPKVDRTGAYIVRQAAKSIVASGLAPRCIVQVSYAIGVPEPLSLFVDSYGTGKIPDKEILKIVKESSDFRPGMMTINLDLKRGGNGRFLKPAAYGHFGRDDPDFTWE 597
            G HGG AF GKD  KVDR+GAY+ R  AK++VASGLAP+C VQ++Y IGV EP+S+ V S GT  +PD+ + + V+E  D RP  +T  LDL R   G   K + YGHFGR+ P+FTWE
Sbjct:  262 GHHGGGAFSGKDASKVDRSGAYMARYIAKNVVASGLAPKCEVQIAYCIGVAEPVSVLVSSQGTASVPDEVLTRAVREVFDLRPFHITRRLDLLRPIYG---KTSCYGHFGRELPEFTWE 377          
BLAST of CF834295 vs. ExPASy Swiss-Prot
Match: METK_DESVH (S-adenosylmethionine synthetase OS=Desulfovibrio vulgaris (strain Hildenborough / ATCC 29579 / NCIMB 8303) GN=metK PE=3 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 6.008e-30
Identity = 65/119 (54.62%), Postives = 83/119 (69.75%), Query Frame = -2
Query:  241 GAHGGCAFFGKDPPKVDRTGAYIVRQAAKSIVASGLAPRCIVQVSYAIGVPEPLSLFVDSYGTGKIPDKEILKIVKESSDFRPGMMTINLDLKRGGNGRFLKPAAYGHFGRDDPDFTWE 597
            G HGG AF GKD  KVDR+GAY+ R  AK++VASGLAP+C VQ++Y IGV EP+S+ V S GT  +PD+ + + V+E  D RP  +T  LDL R   G   K + YGHFGR+ P+FTWE
Sbjct:  262 GHHGGGAFSGKDASKVDRSGAYMARYIAKNVVASGLAPKCEVQIAYCIGVAEPVSVLVSSQGTASVPDEVLTRAVREVFDLRPFHITRRLDLLRPIYG---KTSCYGHFGRELPEFTWE 377          
BLAST of CF834295 vs. ExPASy Swiss-Prot
Match: METK_COXBN (S-adenosylmethionine synthetase OS=Coxiella burnetii (strain Dugway 5J108-111) GN=metK PE=3 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 6.008e-30
Identity = 64/117 (54.70%), Postives = 81/117 (69.23%), Query Frame = -2
Query:  241 HGGCAFFGKDPPKVDRTGAYIVRQAAKSIVASGLAPRCIVQVSYAIGVPEPLSLFVDSYGTGKIPDKEILKIVKESSDFRPGMMTINLDLKRGGNGRFLKPAAYGHFGRDDPDFTWE 591
            HGG  F GKDP KVDR+GAY  R  AK+IVA GLA RC +QVSYAIGV EP S+ V+++GTGKI +    +++KE  D RPG +   L+L R     +   A YGHFGR++P+FTWE
Sbjct:  259 HGGGCFSGKDPSKVDRSGAYAARYVAKNIVAGGLADRCEIQVSYAIGVAEPTSISVETFGTGKIDEVRTQQLIKEHFDLRPGKIIEELNLLR---SIYKATATYGHFGREEPEFTWE 372          
BLAST of CF834295 vs. ExPASy Swiss-Prot
Match: METK_BRAHW (S-adenosylmethionine synthetase OS=Brachyspira hyodysenteriae (strain ATCC 49526 / WA1) GN=metK PE=3 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 6.008e-30
Identity = 64/119 (53.78%), Postives = 84/119 (70.59%), Query Frame = -2
Query:  241 GAHGGCAFFGKDPPKVDRTGAYIVRQAAKSIVASGLAPRCIVQVSYAIGVPEPLSLFVDSYGTGKIPDKEILKIVKESSDFRPGMMTINLDLKRGGNGRFLKPAAYGHFGRDDPDFTWE 597
            GAHGG AF GKDP KVDR+  Y+ R  AK+IVASG+A R +VQ +YAIGVPEPLS++V+++GT K+ D+ +  IV +  D  P  +   LDL+R     + K  AYGHFGR+ P+FTWE
Sbjct:  267 GAHGGGAFSGKDPTKVDRSACYMARYVAKNIVASGIADRALVQFAYAIGVPEPLSVYVNTFGTAKVHDEVLANIVSKELDLTPAGIIKRLDLRR---PIYEKTTAYGHFGRELPEFTWE 382          
BLAST of CF834295 vs. ExPASy Swiss-Prot
Match: METK_AZOSB (S-adenosylmethionine synthetase OS=Azoarcus sp. (strain BH72) GN=metK PE=3 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 6.008e-30
Identity = 64/117 (54.70%), Postives = 85/117 (72.65%), Query Frame = -2
Query:  241 HGGCAFFGKDPPKVDRTGAYIVRQAAKSIVASGLAPRCIVQVSYAIGVPEPLSLFVDSYGTGKIPDKEILKIVKESSDFRPGMMTINLDLKRGGNGRFLKPAAYGHFGRDDPDFTWE 591
            HGG AF GKDP KVDR+ AY  R  AK++VA+GLA +C VQV+YAIGV +P+SL V+++GTGKI D +I+ +++   D RP  +   LDL R     + + AAYGHFGRD+P+FTWE
Sbjct:  261 HGGGAFSGKDPSKVDRSAAYAGRYVAKNVVAAGLADKCEVQVAYAIGVAKPVSLMVNTFGTGKIADDKIVDLIRAHFDLRPKAIIQTLDLLR---PIYSRTAAYGHFGRDEPEFTWE 374          
BLAST of CF834295 vs. ExPASy Swiss-Prot
Match: METK_LARHH (S-adenosylmethionine synthetase OS=Laribacter hongkongensis (strain HLHK9) GN=metK PE=3 SV=1)

HSP 1 Score: 130.183 bits (326), Expect = 7.846e-30
Identity = 65/117 (55.56%), Postives = 85/117 (72.65%), Query Frame = -2
Query:  241 HGGCAFFGKDPPKVDRTGAYIVRQAAKSIVASGLAPRCIVQVSYAIGVPEPLSLFVDSYGTGKIPDKEILKIVKESSDFRPGMMTINLDLKRGGNGRFLKPAAYGHFGRDDPDFTWE 591
            HGG AF GKDP KVDR+ AY  R  AK+IVA+GLA +C +QVSYAIG+ EP S+ VD++GT  IP+++I+++VK   D RP  +   LDL R     + K AAYGHFGR++P+FTWE
Sbjct:  262 HGGGAFSGKDPSKVDRSAAYAGRYVAKNIVAAGLARQCQIQVSYAIGIAEPTSISVDTFGTNAIPNEKIVELVKRHFDLRPKGIIQMLDLLR---PIYTKTAAYGHFGREEPEFTWE 375          
BLAST of CF834295 vs. ExPASy Swiss-Prot
Match: METK_BORPE (S-adenosylmethionine synthetase OS=Bordetella pertussis GN=metK PE=3 SV=1)

HSP 1 Score: 130.183 bits (326), Expect = 7.846e-30
Identity = 66/117 (56.41%), Postives = 84/117 (71.79%), Query Frame = -2
Query:  241 HGGCAFFGKDPPKVDRTGAYIVRQAAKSIVASGLAPRCIVQVSYAIGVPEPLSLFVDSYGTGKIPDKEILKIVKESSDFRPGMMTINLDLKRGGNGRFLKPAAYGHFGRDDPDFTWE 591
            HGG AF GKDP KVDR+ AY  R  AK++VA+GLA +C VQVSYAIGV EP+++ V + GTG IPD++I K+V+E  D RP  +   LDL R     + K AAYGHFGR +P+F+WE
Sbjct:  262 HGGGAFSGKDPSKVDRSAAYAARYVAKNVVAAGLARQCQVQVSYAIGVAEPINITVYTEGTGVIPDEQIAKLVREHFDLRPKGIVNMLDLLR---PIYTKTAAYGHFGRSEPEFSWE 375          
BLAST of CF834295 vs. ExPASy Swiss-Prot
Match: METK_BORPA (S-adenosylmethionine synthetase OS=Bordetella parapertussis GN=metK PE=3 SV=2)

HSP 1 Score: 130.183 bits (326), Expect = 7.846e-30
Identity = 66/117 (56.41%), Postives = 84/117 (71.79%), Query Frame = -2
Query:  241 HGGCAFFGKDPPKVDRTGAYIVRQAAKSIVASGLAPRCIVQVSYAIGVPEPLSLFVDSYGTGKIPDKEILKIVKESSDFRPGMMTINLDLKRGGNGRFLKPAAYGHFGRDDPDFTWE 591
            HGG AF GKDP KVDR+ AY  R  AK++VA+GLA +C VQVSYAIGV EP+++ V + GTG IPD++I K+V+E  D RP  +   LDL R     + K AAYGHFGR +P+F+WE
Sbjct:  262 HGGGAFSGKDPSKVDRSAAYAARYVAKNVVAAGLARQCQVQVSYAIGVAEPINITVYTEGTGVIPDEQIAKLVREHFDLRPKGIVNMLDLLR---PIYTKTAAYGHFGRSEPEFSWE 375          
BLAST of CF834295 vs. ExPASy Swiss-Prot
Match: METK_BORBR (S-adenosylmethionine synthetase OS=Bordetella bronchiseptica GN=metK PE=3 SV=2)

HSP 1 Score: 130.183 bits (326), Expect = 7.846e-30
Identity = 66/117 (56.41%), Postives = 84/117 (71.79%), Query Frame = -2
Query:  241 HGGCAFFGKDPPKVDRTGAYIVRQAAKSIVASGLAPRCIVQVSYAIGVPEPLSLFVDSYGTGKIPDKEILKIVKESSDFRPGMMTINLDLKRGGNGRFLKPAAYGHFGRDDPDFTWE 591
            HGG AF GKDP KVDR+ AY  R  AK++VA+GLA +C VQVSYAIGV EP+++ V + GTG IPD++I K+V+E  D RP  +   LDL R     + K AAYGHFGR +P+F+WE
Sbjct:  262 HGGGAFSGKDPSKVDRSAAYAARYVAKNVVAAGLARQCQVQVSYAIGVAEPINITVYTEGTGVIPDEQIAKLVREHFDLRPKGIVNMLDLLR---PIYTKTAAYGHFGRSEPEFSWE 375          
The following BLAST results are available for this feature:
BLAST of CF834295 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK_POLSQ6.008e-3053.85S-adenosylmethionine synthetase OS=Polynucleobacte... [more]
METK_DESVV6.008e-3054.62S-adenosylmethionine synthetase OS=Desulfovibrio v... [more]
METK_DESVH6.008e-3054.62S-adenosylmethionine synthetase OS=Desulfovibrio v... [more]
METK_COXBN6.008e-3054.70S-adenosylmethionine synthetase OS=Coxiella burnet... [more]
METK_BRAHW6.008e-3053.78S-adenosylmethionine synthetase OS=Brachyspira hyo... [more]
METK_AZOSB6.008e-3054.70S-adenosylmethionine synthetase OS=Azoarcus sp. (s... [more]
METK_LARHH7.846e-3055.56S-adenosylmethionine synthetase OS=Laribacter hong... [more]
METK_BORPE7.846e-3056.41S-adenosylmethionine synthetase OS=Bordetella pert... [more]
METK_BORPA7.846e-3056.41S-adenosylmethionine synthetase OS=Bordetella para... [more]
METK_BORBR7.846e-3056.41S-adenosylmethionine synthetase OS=Bordetella bron... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_05E14_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa05E14, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF834295 ID=CF834295; Name=CF834295; organism=Citrus sinensis; type=EST; length=598bp
GGAACATTAAACCAAAACCAAAAAAGACCTCGGGGAAAGAAGAAAAAGAA
AGGAATTGAATGGGGAACATGTATGAGTTCCGAACACAGGAGATTTGCTT
AGTATTACAAAGCAGCAGCAAGATAATATTCAAATTATTCATCCACTACC
AATAGAAGCAAACTTGAACAGGAGGGATAGTTTGCACTTTTCAACTCAAA
TTTAAGCTTGAGGCTTTTCCCACTTGAGGGGCTTCACAACTTCCCAAGTG
AAGTCTGGGTCATCCCTGCCAAAGTGTCCATAGGCAGCAGGCTTCAAGAA
CCTGCCATTACCGCCCCTTTTGAGATCCAAATTGATGGTCATCATTCCTG
GCCTGAAATCAGAGCTTTCCTTCACAATTTTGAGGATCTCCTTGTCAGGA
ATCTTGCCGGTTCCATATGAGTCCACAAAAAGAGACAATGGCTCAGGCAC
ACCTATGGCATACGAGACTTGGACAATGCACCTGGGAGCAAGCCCGCTTG
CAACAATGCTCTTAGCAGCCTGCCTAACAATGTATGCACCAGTCCTATCC
ACCTTAGGAGGGTCTTTTCCAAAGAAAGCACAGCCACCATGGGCTCCC
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