CF834295

Overview
NameCF834295
Unique NameCF834295
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length598
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CF834295 vs. ExPASy Swiss-Prot
Match: METK_BURTA (S-adenosylmethionine synthetase OS=Burkholderia thailandensis (strain E264 / ATCC 700388 / DSM 13276 / CIP 106301) GN=metK PE=3 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 1.025e-29
Identity = 65/117 (55.56%), Postives = 85/117 (72.65%), Query Frame = -2 
Query:  241 HGGCAFFGKDPPKVDRTGAYIVRQAAKSIVASGLAPRCIVQVSYAIGVPEPLSLFVDSYGTGKIPDKEILKIVKESSDFRPGMMTINLDLKRGGNGRFLKPAAYGHFGRDDPDFTWE 591
            HGG AF GKDP KVDR+ AY  R  AK+IVA+GLA R ++QVSYAIGV EP S+ V+++GTG++ D+ I K+V+E  D RP  +   LDL R     + K AAYGHFGR++P+F+WE
Sbjct:  261 HGGGAFSGKDPSKVDRSAAYAGRYVAKNIVAAGLASRALIQVSYAIGVAEPTSVMVNTFGTGRVSDETITKLVREHFDLRPKGIIQMLDLLR---PIYEKTAAYGHFGREEPEFSWE 374
[Close]
BLAST of CF834295 vs. ExPASy Swiss-Prot
Match: METK_BURPS (S-adenosylmethionine synthetase OS=Burkholderia pseudomallei GN=metK PE=1 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 1.025e-29
Identity = 65/117 (55.56%), Postives = 85/117 (72.65%), Query Frame = -2 
Query:  241 HGGCAFFGKDPPKVDRTGAYIVRQAAKSIVASGLAPRCIVQVSYAIGVPEPLSLFVDSYGTGKIPDKEILKIVKESSDFRPGMMTINLDLKRGGNGRFLKPAAYGHFGRDDPDFTWE 591
            HGG AF GKDP KVDR+ AY  R  AK+IVA+GLA R ++QVSYAIGV EP S+ V+++GTG++ D+ I K+V+E  D RP  +   LDL R     + K AAYGHFGR++P+F+WE
Sbjct:  261 HGGGAFSGKDPSKVDRSAAYAGRYVAKNIVAAGLASRALIQVSYAIGVAEPTSVMVNTFGTGRVSDETITKLVREHFDLRPKGIIQMLDLLR---PIYEKTAAYGHFGREEPEFSWE 374
[Close]
BLAST of CF834295 vs. ExPASy Swiss-Prot
Match: METK_BURP6 (S-adenosylmethionine synthetase OS=Burkholderia pseudomallei (strain 668) GN=metK PE=3 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 1.025e-29
Identity = 65/117 (55.56%), Postives = 85/117 (72.65%), Query Frame = -2 
Query:  241 HGGCAFFGKDPPKVDRTGAYIVRQAAKSIVASGLAPRCIVQVSYAIGVPEPLSLFVDSYGTGKIPDKEILKIVKESSDFRPGMMTINLDLKRGGNGRFLKPAAYGHFGRDDPDFTWE 591
            HGG AF GKDP KVDR+ AY  R  AK+IVA+GLA R ++QVSYAIGV EP S+ V+++GTG++ D+ I K+V+E  D RP  +   LDL R     + K AAYGHFGR++P+F+WE
Sbjct:  261 HGGGAFSGKDPSKVDRSAAYAGRYVAKNIVAAGLASRALIQVSYAIGVAEPTSVMVNTFGTGRVSDETITKLVREHFDLRPKGIIQMLDLLR---PIYEKTAAYGHFGREEPEFSWE 374
[Close]
BLAST of CF834295 vs. ExPASy Swiss-Prot
Match: METK_BURP1 (S-adenosylmethionine synthetase OS=Burkholderia pseudomallei (strain 1710b) GN=metK PE=3 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 1.025e-29
Identity = 65/117 (55.56%), Postives = 85/117 (72.65%), Query Frame = -2 
Query:  241 HGGCAFFGKDPPKVDRTGAYIVRQAAKSIVASGLAPRCIVQVSYAIGVPEPLSLFVDSYGTGKIPDKEILKIVKESSDFRPGMMTINLDLKRGGNGRFLKPAAYGHFGRDDPDFTWE 591
            HGG AF GKDP KVDR+ AY  R  AK+IVA+GLA R ++QVSYAIGV EP S+ V+++GTG++ D+ I K+V+E  D RP  +   LDL R     + K AAYGHFGR++P+F+WE
Sbjct:  261 HGGGAFSGKDPSKVDRSAAYAGRYVAKNIVAAGLASRALIQVSYAIGVAEPTSVMVNTFGTGRVSDETITKLVREHFDLRPKGIIQMLDLLR---PIYEKTAAYGHFGREEPEFSWE 374
[Close]
BLAST of CF834295 vs. ExPASy Swiss-Prot
Match: METK_BURP0 (S-adenosylmethionine synthetase OS=Burkholderia pseudomallei (strain 1106a) GN=metK PE=3 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 1.025e-29
Identity = 65/117 (55.56%), Postives = 85/117 (72.65%), Query Frame = -2 
Query:  241 HGGCAFFGKDPPKVDRTGAYIVRQAAKSIVASGLAPRCIVQVSYAIGVPEPLSLFVDSYGTGKIPDKEILKIVKESSDFRPGMMTINLDLKRGGNGRFLKPAAYGHFGRDDPDFTWE 591
            HGG AF GKDP KVDR+ AY  R  AK+IVA+GLA R ++QVSYAIGV EP S+ V+++GTG++ D+ I K+V+E  D RP  +   LDL R     + K AAYGHFGR++P+F+WE
Sbjct:  261 HGGGAFSGKDPSKVDRSAAYAGRYVAKNIVAAGLASRALIQVSYAIGVAEPTSVMVNTFGTGRVSDETITKLVREHFDLRPKGIIQMLDLLR---PIYEKTAAYGHFGREEPEFSWE 374
[Close]
BLAST of CF834295 vs. ExPASy Swiss-Prot
Match: METK_BURMS (S-adenosylmethionine synthetase OS=Burkholderia mallei (strain SAVP1) GN=metK PE=3 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 1.025e-29
Identity = 65/117 (55.56%), Postives = 85/117 (72.65%), Query Frame = -2 
Query:  241 HGGCAFFGKDPPKVDRTGAYIVRQAAKSIVASGLAPRCIVQVSYAIGVPEPLSLFVDSYGTGKIPDKEILKIVKESSDFRPGMMTINLDLKRGGNGRFLKPAAYGHFGRDDPDFTWE 591
            HGG AF GKDP KVDR+ AY  R  AK+IVA+GLA R ++QVSYAIGV EP S+ V+++GTG++ D+ I K+V+E  D RP  +   LDL R     + K AAYGHFGR++P+F+WE
Sbjct:  261 HGGGAFSGKDPSKVDRSAAYAGRYVAKNIVAAGLASRALIQVSYAIGVAEPTSVMVNTFGTGRVSDETITKLVREHFDLRPKGIIQMLDLLR---PIYEKTAAYGHFGREEPEFSWE 374
[Close]
BLAST of CF834295 vs. ExPASy Swiss-Prot
Match: METK_BURMA (S-adenosylmethionine synthetase OS=Burkholderia mallei GN=metK PE=3 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 1.025e-29
Identity = 65/117 (55.56%), Postives = 85/117 (72.65%), Query Frame = -2 
Query:  241 HGGCAFFGKDPPKVDRTGAYIVRQAAKSIVASGLAPRCIVQVSYAIGVPEPLSLFVDSYGTGKIPDKEILKIVKESSDFRPGMMTINLDLKRGGNGRFLKPAAYGHFGRDDPDFTWE 591
            HGG AF GKDP KVDR+ AY  R  AK+IVA+GLA R ++QVSYAIGV EP S+ V+++GTG++ D+ I K+V+E  D RP  +   LDL R     + K AAYGHFGR++P+F+WE
Sbjct:  261 HGGGAFSGKDPSKVDRSAAYAGRYVAKNIVAAGLASRALIQVSYAIGVAEPTSVMVNTFGTGRVSDETITKLVREHFDLRPKGIIQMLDLLR---PIYEKTAAYGHFGREEPEFSWE 374
[Close]
BLAST of CF834295 vs. ExPASy Swiss-Prot
Match: METK_BURM9 (S-adenosylmethionine synthetase OS=Burkholderia mallei (strain NCTC 10229) GN=metK PE=3 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 1.025e-29
Identity = 65/117 (55.56%), Postives = 85/117 (72.65%), Query Frame = -2 
Query:  241 HGGCAFFGKDPPKVDRTGAYIVRQAAKSIVASGLAPRCIVQVSYAIGVPEPLSLFVDSYGTGKIPDKEILKIVKESSDFRPGMMTINLDLKRGGNGRFLKPAAYGHFGRDDPDFTWE 591
            HGG AF GKDP KVDR+ AY  R  AK+IVA+GLA R ++QVSYAIGV EP S+ V+++GTG++ D+ I K+V+E  D RP  +   LDL R     + K AAYGHFGR++P+F+WE
Sbjct:  261 HGGGAFSGKDPSKVDRSAAYAGRYVAKNIVAAGLASRALIQVSYAIGVAEPTSVMVNTFGTGRVSDETITKLVREHFDLRPKGIIQMLDLLR---PIYEKTAAYGHFGREEPEFSWE 374
[Close]
BLAST of CF834295 vs. ExPASy Swiss-Prot
Match: METK_BURM7 (S-adenosylmethionine synthetase OS=Burkholderia mallei (strain NCTC 10247) GN=metK PE=3 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 1.025e-29
Identity = 65/117 (55.56%), Postives = 85/117 (72.65%), Query Frame = -2 
Query:  241 HGGCAFFGKDPPKVDRTGAYIVRQAAKSIVASGLAPRCIVQVSYAIGVPEPLSLFVDSYGTGKIPDKEILKIVKESSDFRPGMMTINLDLKRGGNGRFLKPAAYGHFGRDDPDFTWE 591
            HGG AF GKDP KVDR+ AY  R  AK+IVA+GLA R ++QVSYAIGV EP S+ V+++GTG++ D+ I K+V+E  D RP  +   LDL R     + K AAYGHFGR++P+F+WE
Sbjct:  261 HGGGAFSGKDPSKVDRSAAYAGRYVAKNIVAAGLASRALIQVSYAIGVAEPTSVMVNTFGTGRVSDETITKLVREHFDLRPKGIIQMLDLLR---PIYEKTAAYGHFGREEPEFSWE 374
[Close]
BLAST of CF834295 vs. ExPASy Swiss-Prot
Match: METK_BORPD (S-adenosylmethionine synthetase OS=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) GN=metK PE=3 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 1.025e-29
Identity = 69/127 (54.33%), Postives = 89/127 (70.08%), Query Frame = -2 
Query:  214 HGGCAFFGKDPPKVDRTGAYIVRQAAKSIVASGLAPRCIVQVSYAIGVPEPLSLFVDSYGTGKIPDKEILKIVKESSDFRPGMMTINLDLKRGGNGRFLKPAAYGHFGRDDPDFTWEVV-KPLKWEK 591
            HGG AF GKDP KVDR+ AY  R  AK++VA+GLA +C VQVSYAIGV EP+++ V + GTG IPD++I K+V+E  D RP  +   LDL R     + K AAYGHFGR +P+F+WE   K L+ +K
Sbjct:  262 HGGGAFSGKDPSKVDRSAAYAARYVAKNVVAAGLARQCQVQVSYAIGVAEPINITVYTEGTGVIPDEQIAKLVREHFDLRPKGIVNMLDLLR---PIYAKTAAYGHFGRAEPEFSWEATDKALELKK 385
The following BLAST results are available for this feature:
BLAST of CF834295 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK_BURTA1.025e-2955.56S-adenosylmethionine synthetase OS=Burkholderia th... [more]
METK_BURPS1.025e-2955.56S-adenosylmethionine synthetase OS=Burkholderia ps... [more]
METK_BURP61.025e-2955.56S-adenosylmethionine synthetase OS=Burkholderia ps... [more]
METK_BURP11.025e-2955.56S-adenosylmethionine synthetase OS=Burkholderia ps... [more]
METK_BURP01.025e-2955.56S-adenosylmethionine synthetase OS=Burkholderia ps... [more]
METK_BURMS1.025e-2955.56S-adenosylmethionine synthetase OS=Burkholderia ma... [more]
METK_BURMA1.025e-2955.56S-adenosylmethionine synthetase OS=Burkholderia ma... [more]
METK_BURM91.025e-2955.56S-adenosylmethionine synthetase OS=Burkholderia ma... [more]
METK_BURM71.025e-2955.56S-adenosylmethionine synthetase OS=Burkholderia ma... [more]
METK_BORPD1.025e-2954.33S-adenosylmethionine synthetase OS=Bordetella petr... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_05E14_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa05E14, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF834295 ID=CF834295; Name=CF834295; organism=Citrus sinensis; type=EST; length=598bp
GGAACATTAAACCAAAACCAAAAAAGACCTCGGGGAAAGAAGAAAAAGAA
AGGAATTGAATGGGGAACATGTATGAGTTCCGAACACAGGAGATTTGCTT
AGTATTACAAAGCAGCAGCAAGATAATATTCAAATTATTCATCCACTACC
AATAGAAGCAAACTTGAACAGGAGGGATAGTTTGCACTTTTCAACTCAAA
TTTAAGCTTGAGGCTTTTCCCACTTGAGGGGCTTCACAACTTCCCAAGTG
AAGTCTGGGTCATCCCTGCCAAAGTGTCCATAGGCAGCAGGCTTCAAGAA
CCTGCCATTACCGCCCCTTTTGAGATCCAAATTGATGGTCATCATTCCTG
GCCTGAAATCAGAGCTTTCCTTCACAATTTTGAGGATCTCCTTGTCAGGA
ATCTTGCCGGTTCCATATGAGTCCACAAAAAGAGACAATGGCTCAGGCAC
ACCTATGGCATACGAGACTTGGACAATGCACCTGGGAGCAAGCCCGCTTG
CAACAATGCTCTTAGCAGCCTGCCTAACAATGTATGCACCAGTCCTATCC
ACCTTAGGAGGGTCTTTTCCAAAGAAAGCACAGCCACCATGGGCTCCC
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