CF834295

Overview
NameCF834295
Unique NameCF834295
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length598
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF834295 vs. ExPASy Swiss-Prot
Match: METK_BDEBA (S-adenosylmethionine synthetase OS=Bdellovibrio bacteriovorus GN=metK PE=3 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 2.982e-29
Identity = 65/119 (54.62%), Postives = 83/119 (69.75%), Query Frame = -2
Query:  241 GAHGGCAFFGKDPPKVDRTGAYIVRQAAKSIVASGLAPRCIVQVSYAIGVPEPLSLFVDSYGTGKIPDKEILKIVKESSDFRPGMMTINLDLKRGGNGRFLKPAAYGHFGRDDPDFTWE 597
            GAHGG AF GKDP KVDR+ AY  R  AK+IV +GLA RC+VQV+YAIGV EP+S+ V+ YGT K+  + + K V++  D RP  +T +LDL R     +   AAYGHFGR++  FTWE
Sbjct:  256 GAHGGGAFSGKDPSKVDRSAAYASRHIAKNIVGAGLAERCLVQVAYAIGVAEPVSITVNDYGTSKVGPEVLEKAVRQVFDLRPARITKDLDLLR---PIYSPTAAYGHFGRNEESFTWE 371          
BLAST of CF834295 vs. ExPASy Swiss-Prot
Match: METK_RALPJ (S-adenosylmethionine synthetase OS=Ralstonia pickettii (strain 12J) GN=metK PE=3 SV=1)

HSP 1 Score: 127.872 bits (320), Expect = 3.894e-29
Identity = 65/117 (55.56%), Postives = 84/117 (71.79%), Query Frame = -2
Query:  241 HGGCAFFGKDPPKVDRTGAYIVRQAAKSIVASGLAPRCIVQVSYAIGVPEPLSLFVDSYGTGKIPDKEILKIVKESSDFRPGMMTINLDLKRGGNGRFLKPAAYGHFGRDDPDFTWE 591
            HGG AF GKDP KVDR+ AY  R  AK++VA+GLA +C VQVSYAIGV  P+++ V + GTG IPD++I K+V+E  D RP  +   LDL R     + K AAYGHFGR++P+F+WE
Sbjct:  260 HGGGAFSGKDPSKVDRSAAYAARYVAKNVVAAGLARQCQVQVSYAIGVARPINITVYTEGTGVIPDEQIAKLVQEHFDLRPKGIVQMLDLLR---PVYEKTAAYGHFGREEPEFSWE 373          
BLAST of CF834295 vs. ExPASy Swiss-Prot
Match: METK_POLNS (S-adenosylmethionine synthetase OS=Polynucleobacter necessarius (strain STIR1) GN=metK PE=3 SV=1)

HSP 1 Score: 127.872 bits (320), Expect = 3.894e-29
Identity = 62/117 (52.99%), Postives = 85/117 (72.65%), Query Frame = -2
Query:  241 HGGCAFFGKDPPKVDRTGAYIVRQAAKSIVASGLAPRCIVQVSYAIGVPEPLSLFVDSYGTGKIPDKEILKIVKESSDFRPGMMTINLDLKRGGNGRFLKPAAYGHFGRDDPDFTWE 591
            HGG AF GKDP KVDR+ AY  R  AK++VA+GLA +C++Q+SYAIGV +P S+ V ++GTGKI D++I ++V E  D RP  +   L+L R     + K AAYGHFGR++P+F+WE
Sbjct:  261 HGGGAFSGKDPSKVDRSAAYAGRYVAKNVVAAGLASKCLIQISYAIGVAKPTSVMVSAFGTGKIVDEKIAQLVSEHFDLRPKGIVKMLNLLR---PIYKKTAAYGHFGREEPEFSWE 374          
BLAST of CF834295 vs. ExPASy Swiss-Prot
Match: METK_NITEC (S-adenosylmethionine synthetase OS=Nitrosomonas eutropha (strain C91) GN=metK PE=3 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 5.086e-29
Identity = 61/117 (52.14%), Postives = 85/117 (72.65%), Query Frame = -2
Query:  241 HGGCAFFGKDPPKVDRTGAYIVRQAAKSIVASGLAPRCIVQVSYAIGVPEPLSLFVDSYGTGKIPDKEILKIVKESSDFRPGMMTINLDLKRGGNGRFLKPAAYGHFGRDDPDFTWE 591
            HGG AF GKDP KVDR+ AY  R  AK+IVA+GLA +C VQV+YAIGV +P+SL ++++GTGK+ D+++ +++  + D RP  +   L+L R     + K AAYGHFGR++P FTWE
Sbjct:  260 HGGGAFSGKDPSKVDRSAAYAARYVAKNIVAAGLARKCEVQVAYAIGVAKPVSLMLETFGTGKVSDEKLAELITRNFDLRPRAIIHELNLLR---PIYSKTAAYGHFGREEPSFTWE 373          
BLAST of CF834295 vs. ExPASy Swiss-Prot
Match: METK_CLOCE (S-adenosylmethionine synthetase OS=Clostridium cellulolyticum (strain ATCC 35319 / DSM 5812 / JCM 6584 / H10) GN=metK PE=3 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 5.086e-29
Identity = 62/117 (52.99%), Postives = 85/117 (72.65%), Query Frame = -2
Query:  241 HGGCAFFGKDPPKVDRTGAYIVRQAAKSIVASGLAPRCIVQVSYAIGVPEPLSLFVDSYGTGKIPDKEILKIVKESSDFRPGMMTINLDLKRGGNGRFLKPAAYGHFGRDDPDFTWE 591
            HGG AF GKDP KVDR+ AY  R  AK+IVASG+A +C VQ++YAIGV +P+S+ VD++GT  IP+++I ++V +  D RP  +   L+L+R     + K AAYGHFGRDD +F+WE
Sbjct:  269 HGGGAFSGKDPTKVDRSAAYAARYVAKNIVASGIARKCEVQLAYAIGVAKPVSVLVDTFGTAVIPEEKISELVNKHFDLRPAAIINKLNLRR---PIYRKTAAYGHFGRDDAEFSWE 382          
BLAST of CF834295 vs. ExPASy Swiss-Prot
Match: METK_CYAP8 (S-adenosylmethionine synthetase OS=Cyanothece sp. (strain PCC 8801) GN=metK PE=3 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 6.642e-29
Identity = 66/121 (54.55%), Postives = 86/121 (71.07%), Query Frame = -2
Query:  241 HGGCAFFGKDPPKVDRTGAYIVRQAAKSIVASGLAPRCIVQVSYAIGVPEPLSLFVDSYGTGKIPDKEILKIVKESSDFRPG--MMTINL-DLKRGGNGRFLKP-AAYGHFGRDDPDFTWE 591
            HGG AF GKDP KVDR+ AY  R  AK+IVA+GLA +C VQVSYAIGV  P+S+ V+++GTGK+ + ++LK+V+E  + RP   + T+NL +L     GRF +  AAYGHFGR D D  WE
Sbjct:  279 HGGGAFSGKDPTKVDRSAAYACRYVAKNIVAAGLADKCEVQVSYAIGVARPVSILVETFGTGKVDEDKLLKVVQELFELRPAGILQTLNLRELPSQRGGRFYQDVAAYGHFGRTDLDLPWE 399          
BLAST of CF834295 vs. ExPASy Swiss-Prot
Match: METK2_PONAB (S-adenosylmethionine synthetase isoform type-2 OS=Pongo abelii GN=MAT2A PE=2 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 6.642e-29
Identity = 68/126 (53.97%), Postives = 87/126 (69.05%), Query Frame = -2
Query:  220 GAHGGCAFFGKDPPKVDRTGAYIVRQAAKSIVASGLAPRCIVQVSYAIGVPEPLSLFVDSYGTGKIPDKEILKIVKESSDFRPGMMTINLDLKRGGNGRFLKPAAYGHFGRDDPDFTWEVVKPLKW 597
            GAHGG AF GKD  KVDR+ AY  R  AKS+V  GL  R +VQVSYAIGV  PLS+ +  YGT +  ++E+L+IVK++ D RPG++  +LDLK+     + + AAYGHFGRD   F WEV K LK+
Sbjct:  275 GAHGGGAFSGKDYTKVDRSAAYAARWVAKSLVKGGLCRRVLVQVSYAIGVSHPLSISIFHYGTSQKSERELLEIVKKNFDLRPGVIVRDLDLKK---PIYQRTAAYGHFGRD--SFPWEVPKKLKY 395          
BLAST of CF834295 vs. ExPASy Swiss-Prot
Match: METK2_MOUSE (S-adenosylmethionine synthetase isoform type-2 OS=Mus musculus GN=Mat2a PE=2 SV=2)

HSP 1 Score: 127.102 bits (318), Expect = 6.642e-29
Identity = 68/126 (53.97%), Postives = 87/126 (69.05%), Query Frame = -2
Query:  220 GAHGGCAFFGKDPPKVDRTGAYIVRQAAKSIVASGLAPRCIVQVSYAIGVPEPLSLFVDSYGTGKIPDKEILKIVKESSDFRPGMMTINLDLKRGGNGRFLKPAAYGHFGRDDPDFTWEVVKPLKW 597
            GAHGG AF GKD  KVDR+ AY  R  AKS+V  GL  R +VQVSYAIGV  PLS+ +  YGT +  ++E+L+IVK++ D RPG++  +LDLK+     + + AAYGHFGRD   F WEV K LK+
Sbjct:  275 GAHGGGAFSGKDYTKVDRSAAYAARWVAKSLVKGGLCRRVLVQVSYAIGVSHPLSISIFHYGTSQKSERELLEIVKKNFDLRPGVIVRDLDLKK---PIYQRTAAYGHFGRD--SFPWEVPKKLKY 395          
BLAST of CF834295 vs. ExPASy Swiss-Prot
Match: METK2_MACFA (S-adenosylmethionine synthetase isoform type-2 OS=Macaca fascicularis GN=MAT2A PE=2 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 6.642e-29
Identity = 68/126 (53.97%), Postives = 87/126 (69.05%), Query Frame = -2
Query:  220 GAHGGCAFFGKDPPKVDRTGAYIVRQAAKSIVASGLAPRCIVQVSYAIGVPEPLSLFVDSYGTGKIPDKEILKIVKESSDFRPGMMTINLDLKRGGNGRFLKPAAYGHFGRDDPDFTWEVVKPLKW 597
            GAHGG AF GKD  KVDR+ AY  R  AKS+V  GL  R +VQVSYAIGV  PLS+ +  YGT +  ++E+L+IVK++ D RPG++  +LDLK+     + + AAYGHFGRD   F WEV K LK+
Sbjct:  275 GAHGGGAFSGKDYTKVDRSAAYAARWVAKSLVKGGLCRRVLVQVSYAIGVSHPLSISIFHYGTSQKSERELLEIVKKNFDLRPGVIVRDLDLKK---PIYQRTAAYGHFGRD--SFPWEVPKKLKY 395          
BLAST of CF834295 vs. ExPASy Swiss-Prot
Match: METK2_HUMAN (S-adenosylmethionine synthetase isoform type-2 OS=Homo sapiens GN=MAT2A PE=1 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 6.642e-29
Identity = 68/126 (53.97%), Postives = 87/126 (69.05%), Query Frame = -2
Query:  220 GAHGGCAFFGKDPPKVDRTGAYIVRQAAKSIVASGLAPRCIVQVSYAIGVPEPLSLFVDSYGTGKIPDKEILKIVKESSDFRPGMMTINLDLKRGGNGRFLKPAAYGHFGRDDPDFTWEVVKPLKW 597
            GAHGG AF GKD  KVDR+ AY  R  AKS+V  GL  R +VQVSYAIGV  PLS+ +  YGT +  ++E+L+IVK++ D RPG++  +LDLK+     + + AAYGHFGRD   F WEV K LK+
Sbjct:  275 GAHGGGAFSGKDYTKVDRSAAYAARWVAKSLVKGGLCRRVLVQVSYAIGVSHPLSISIFHYGTSQKSERELLEIVKKNFDLRPGVIVRDLDLKK---PIYQRTAAYGHFGRD--SFPWEVPKKLKY 395          
The following BLAST results are available for this feature:
BLAST of CF834295 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK_BDEBA2.982e-2954.62S-adenosylmethionine synthetase OS=Bdellovibrio ba... [more]
METK_RALPJ3.894e-2955.56S-adenosylmethionine synthetase OS=Ralstonia picke... [more]
METK_POLNS3.894e-2952.99S-adenosylmethionine synthetase OS=Polynucleobacte... [more]
METK_NITEC5.086e-2952.14S-adenosylmethionine synthetase OS=Nitrosomonas eu... [more]
METK_CLOCE5.086e-2952.99S-adenosylmethionine synthetase OS=Clostridium cel... [more]
METK_CYAP86.642e-2954.55S-adenosylmethionine synthetase OS=Cyanothece sp. ... [more]
METK2_PONAB6.642e-2953.97S-adenosylmethionine synthetase isoform type-2 OS=... [more]
METK2_MOUSE6.642e-2953.97S-adenosylmethionine synthetase isoform type-2 OS=... [more]
METK2_MACFA6.642e-2953.97S-adenosylmethionine synthetase isoform type-2 OS=... [more]
METK2_HUMAN6.642e-2953.97S-adenosylmethionine synthetase isoform type-2 OS=... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_05E14_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa05E14, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF834295 ID=CF834295; Name=CF834295; organism=Citrus sinensis; type=EST; length=598bp
GGAACATTAAACCAAAACCAAAAAAGACCTCGGGGAAAGAAGAAAAAGAA
AGGAATTGAATGGGGAACATGTATGAGTTCCGAACACAGGAGATTTGCTT
AGTATTACAAAGCAGCAGCAAGATAATATTCAAATTATTCATCCACTACC
AATAGAAGCAAACTTGAACAGGAGGGATAGTTTGCACTTTTCAACTCAAA
TTTAAGCTTGAGGCTTTTCCCACTTGAGGGGCTTCACAACTTCCCAAGTG
AAGTCTGGGTCATCCCTGCCAAAGTGTCCATAGGCAGCAGGCTTCAAGAA
CCTGCCATTACCGCCCCTTTTGAGATCCAAATTGATGGTCATCATTCCTG
GCCTGAAATCAGAGCTTTCCTTCACAATTTTGAGGATCTCCTTGTCAGGA
ATCTTGCCGGTTCCATATGAGTCCACAAAAAGAGACAATGGCTCAGGCAC
ACCTATGGCATACGAGACTTGGACAATGCACCTGGGAGCAAGCCCGCTTG
CAACAATGCTCTTAGCAGCCTGCCTAACAATGTATGCACCAGTCCTATCC
ACCTTAGGAGGGTCTTTTCCAAAGAAAGCACAGCCACCATGGGCTCCC
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