CF834295

Overview
NameCF834295
Unique NameCF834295
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length598
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF834295 vs. ExPASy Swiss-Prot
Match: METK_CLOBL (S-adenosylmethionine synthetase OS=Clostridium botulinum (strain Langeland / NCTC 10281 / Type F) GN=metK PE=3 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 3.297e-28
Identity = 62/119 (52.10%), Postives = 85/119 (71.43%), Query Frame = -2
Query:  241 GAHGGCAFFGKDPPKVDRTGAYIVRQAAKSIVASGLAPRCIVQVSYAIGVPEPLSLFVDSYGTGKIPDKEILKIVKESSDFRPGMMTINLDLKRGGNGRFLKPAAYGHFGRDDPDFTWE 597
            G HGG AF GKDP KVDR+ AY  R  AK++VA+G+A +  +Q++YAIGV +P+S+ VD++GTGK+ D+EI+ IV +  D RPG +  +LDL+R     + + AAYGHFGR D D  WE
Sbjct:  264 GRHGGGAFSGKDPTKVDRSAAYAARWVAKNLVAAGVADKLEIQLAYAIGVAKPVSISVDTFGTGKMTDEEIVSIVNKVFDLRPGAIIRDLDLRR---PIYKQVAAYGHFGRTDIDVPWE 379          
BLAST of CF834295 vs. ExPASy Swiss-Prot
Match: METK_CLOBK (S-adenosylmethionine synthetase OS=Clostridium botulinum (strain Okra / Type B1) GN=metK PE=3 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 3.297e-28
Identity = 62/119 (52.10%), Postives = 85/119 (71.43%), Query Frame = -2
Query:  241 GAHGGCAFFGKDPPKVDRTGAYIVRQAAKSIVASGLAPRCIVQVSYAIGVPEPLSLFVDSYGTGKIPDKEILKIVKESSDFRPGMMTINLDLKRGGNGRFLKPAAYGHFGRDDPDFTWE 597
            G HGG AF GKDP KVDR+ AY  R  AK++VA+G+A +  +Q++YAIGV +P+S+ VD++GTGK+ D+EI+ IV +  D RPG +  +LDL+R     + + AAYGHFGR D D  WE
Sbjct:  264 GRHGGGAFSGKDPTKVDRSAAYAARWVAKNLVAAGVADKLEIQLAYAIGVAKPVSISVDTFGTGKMTDEEIVSIVNKVFDLRPGAIIRDLDLRR---PIYKQVAAYGHFGRTDIDVPWE 379          
BLAST of CF834295 vs. ExPASy Swiss-Prot
Match: METK_CLOBJ (S-adenosylmethionine synthetase OS=Clostridium botulinum (strain Kyoto / Type A2) GN=metK PE=3 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 3.297e-28
Identity = 62/119 (52.10%), Postives = 85/119 (71.43%), Query Frame = -2
Query:  241 GAHGGCAFFGKDPPKVDRTGAYIVRQAAKSIVASGLAPRCIVQVSYAIGVPEPLSLFVDSYGTGKIPDKEILKIVKESSDFRPGMMTINLDLKRGGNGRFLKPAAYGHFGRDDPDFTWE 597
            G HGG AF GKDP KVDR+ AY  R  AK++VA+G+A +  +Q++YAIGV +P+S+ VD++GTGK+ D+EI+ IV +  D RPG +  +LDL+R     + + AAYGHFGR D D  WE
Sbjct:  264 GRHGGGAFSGKDPTKVDRSAAYAARWVAKNLVAAGVADKLEIQLAYAIGVAKPVSISVDTFGTGKMTDEEIVSIVNKVFDLRPGAIIRDLDLRR---PIYKQVAAYGHFGRTDIDVPWE 379          
BLAST of CF834295 vs. ExPASy Swiss-Prot
Match: METK_CLOBH (S-adenosylmethionine synthetase OS=Clostridium botulinum (strain Hall / ATCC 3502 / NCTC 13319 / Type A) GN=metK PE=3 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 3.297e-28
Identity = 62/119 (52.10%), Postives = 85/119 (71.43%), Query Frame = -2
Query:  241 GAHGGCAFFGKDPPKVDRTGAYIVRQAAKSIVASGLAPRCIVQVSYAIGVPEPLSLFVDSYGTGKIPDKEILKIVKESSDFRPGMMTINLDLKRGGNGRFLKPAAYGHFGRDDPDFTWE 597
            G HGG AF GKDP KVDR+ AY  R  AK++VA+G+A +  +Q++YAIGV +P+S+ VD++GTGK+ D+EI+ IV +  D RPG +  +LDL+R     + + AAYGHFGR D D  WE
Sbjct:  264 GRHGGGAFSGKDPTKVDRSAAYAARWVAKNLVAAGVADKLEIQLAYAIGVAKPVSISVDTFGTGKMTDEEIVSIVNKVFDLRPGAIIRDLDLRR---PIYKQVAAYGHFGRTDIDVPWE 379          
BLAST of CF834295 vs. ExPASy Swiss-Prot
Match: METK_CLOB1 (S-adenosylmethionine synthetase OS=Clostridium botulinum (strain ATCC 19397 / Type A) GN=metK PE=3 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 3.297e-28
Identity = 62/119 (52.10%), Postives = 85/119 (71.43%), Query Frame = -2
Query:  241 GAHGGCAFFGKDPPKVDRTGAYIVRQAAKSIVASGLAPRCIVQVSYAIGVPEPLSLFVDSYGTGKIPDKEILKIVKESSDFRPGMMTINLDLKRGGNGRFLKPAAYGHFGRDDPDFTWE 597
            G HGG AF GKDP KVDR+ AY  R  AK++VA+G+A +  +Q++YAIGV +P+S+ VD++GTGK+ D+EI+ IV +  D RPG +  +LDL+R     + + AAYGHFGR D D  WE
Sbjct:  264 GRHGGGAFSGKDPTKVDRSAAYAARWVAKNLVAAGVADKLEIQLAYAIGVAKPVSISVDTFGTGKMTDEEIVSIVNKVFDLRPGAIIRDLDLRR---PIYKQVAAYGHFGRTDIDVPWE 379          
BLAST of CF834295 vs. ExPASy Swiss-Prot
Match: METK_TREDE (S-adenosylmethionine synthetase OS=Treponema denticola GN=metK PE=3 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 4.305e-28
Identity = 63/119 (52.94%), Postives = 86/119 (72.27%), Query Frame = -2
Query:  241 GAHGGCAFFGKDPPKVDRTGAYIVRQAAKSIVASGLAPRCIVQVSYAIGVPEPLSLFVDSYGTGKIPDKEILKIVKESSDFRPGMMTINLDLKRGGNGRFLKPAAYGHFGRDDPDFTWE 597
            G HGG AF GKDP KVDR+ AY+ R  AK++VA+ LA RC VQ++YAIGVP P+++ VD++GTG++P+++I K +KE  D  P  +   LDLKR     + + AAYGHFGR  P+F+WE
Sbjct:  263 GRHGGGAFSGKDPSKVDRSAAYMARYIAKNVVAADLARRCEVQLAYAIGVPFPVAVRVDTFGTGEVPEEKIEKAIKEVFDMSPAGIIKTLDLKR---PIYKETAAYGHFGR--PEFSWE 376          
BLAST of CF834295 vs. ExPASy Swiss-Prot
Match: METK_RICAH (S-adenosylmethionine synthetase OS=Rickettsia akari (strain Hartford) GN=metK PE=3 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 4.305e-28
Identity = 56/117 (47.86%), Postives = 83/117 (70.94%), Query Frame = -2
Query:  241 HGGCAFFGKDPPKVDRTGAYIVRQAAKSIVASGLAPRCIVQVSYAIGVPEPLSLFVDSYGTGKIPDKEILKIVKESSDFRPGMMTINLDLKRGGNGRFLKPAAYGHFGRDDPDFTWE 591
            HGG  F GKDP K+DR+ AY+ R  AK++V +GLA RC +Q+SYAIGV  P+S++ +++GT K+ +++I K++ +  D RPG +  +L L+      + K A+YGHFGR+D DFTWE
Sbjct:  258 HGGGCFSGKDPTKIDRSAAYMARYIAKNVVGAGLADRCEIQISYAIGVAAPVSVYTETFGTSKLSNEQITKLITQHFDMRPGKIIKHLALR---TPCYQKTASYGHFGREDADFTWE 371          
BLAST of CF834295 vs. ExPASy Swiss-Prot
Match: METK_RALME (S-adenosylmethionine synthetase OS=Ralstonia metallidurans (strain CH34 / ATCC 43123 / DSM 2839) GN=metK PE=3 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 4.305e-28
Identity = 64/117 (54.70%), Postives = 83/117 (70.94%), Query Frame = -2
Query:  241 HGGCAFFGKDPPKVDRTGAYIVRQAAKSIVASGLAPRCIVQVSYAIGVPEPLSLFVDSYGTGKIPDKEILKIVKESSDFRPGMMTINLDLKRGGNGRFLKPAAYGHFGRDDPDFTWE 591
            HGG AF GKDP KVDR+ AY  R  AK++VA+GLA +C VQVSYAIGV  P+++ V + GTGKI D++I  +V+E  D RP  +   LDL R     + K AAYGHFGR++P+F+WE
Sbjct:  260 HGGGAFSGKDPSKVDRSAAYAARYVAKNVVAAGLARQCQVQVSYAIGVARPINVTVYTEGTGKISDEKIAALVQEHFDLRPKGIVQMLDLLR---PIYEKTAAYGHFGREEPEFSWE 373          
BLAST of CF834295 vs. ExPASy Swiss-Prot
Match: METK_RALEJ (S-adenosylmethionine synthetase OS=Ralstonia eutropha (strain JMP134) GN=metK PE=3 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 4.305e-28
Identity = 64/117 (54.70%), Postives = 83/117 (70.94%), Query Frame = -2
Query:  241 HGGCAFFGKDPPKVDRTGAYIVRQAAKSIVASGLAPRCIVQVSYAIGVPEPLSLFVDSYGTGKIPDKEILKIVKESSDFRPGMMTINLDLKRGGNGRFLKPAAYGHFGRDDPDFTWE 591
            HGG AF GKDP KVDR+ AY  R  AK++VA+GLA +C VQVSYAIGV  P+++ V + GTGKI D +I ++V+E  D RP  +   LDL R     + K AAYGHFGR++P+F+WE
Sbjct:  260 HGGGAFSGKDPSKVDRSAAYAARYVAKNVVAAGLARQCQVQVSYAIGVARPINVTVYTEGTGKISDAKIAELVQEHFDLRPKGIVQMLDLLR---PIYEKTAAYGHFGREEPEFSWE 373          
BLAST of CF834295 vs. ExPASy Swiss-Prot
Match: METK_NITSB (S-adenosylmethionine synthetase OS=Nitratiruptor sp. (strain SB155-2) GN=metK PE=3 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 4.305e-28
Identity = 62/117 (52.99%), Postives = 81/117 (69.23%), Query Frame = -2
Query:  241 HGGCAFFGKDPPKVDRTGAYIVRQAAKSIVASGLAPRCIVQVSYAIGVPEPLSLFVDSYGTGKIPDKEILKIVKESSDFRPGMMTINLDLKRGGNGRFLKPAAYGHFGRDDPDFTWE 591
            HGG AF GKDP KVDR+GAY  R  AK++VASG   +  VQ++YAIGV EP+S+ VDS+GT K+PD+++   V++  D  P  +   LDL R     + K AAYGHFGR+ P+FTWE
Sbjct:  258 HGGGAFSGKDPTKVDRSGAYAARYVAKNLVASGACEKATVQIAYAIGVVEPVSIMVDSHGTAKVPDEKLEACVRDLFDLTPRGIIKTLDLLR---PIYRKTAAYGHFGRELPEFTWE 371          
The following BLAST results are available for this feature:
BLAST of CF834295 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK_CLOBL3.297e-2852.10S-adenosylmethionine synthetase OS=Clostridium bot... [more]
METK_CLOBK3.297e-2852.10S-adenosylmethionine synthetase OS=Clostridium bot... [more]
METK_CLOBJ3.297e-2852.10S-adenosylmethionine synthetase OS=Clostridium bot... [more]
METK_CLOBH3.297e-2852.10S-adenosylmethionine synthetase OS=Clostridium bot... [more]
METK_CLOB13.297e-2852.10S-adenosylmethionine synthetase OS=Clostridium bot... [more]
METK_TREDE4.305e-2852.94S-adenosylmethionine synthetase OS=Treponema denti... [more]
METK_RICAH4.305e-2847.86S-adenosylmethionine synthetase OS=Rickettsia akar... [more]
METK_RALME4.305e-2854.70S-adenosylmethionine synthetase OS=Ralstonia metal... [more]
METK_RALEJ4.305e-2854.70S-adenosylmethionine synthetase OS=Ralstonia eutro... [more]
METK_NITSB4.305e-2852.99S-adenosylmethionine synthetase OS=Nitratiruptor s... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_05E14_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa05E14, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF834295 ID=CF834295; Name=CF834295; organism=Citrus sinensis; type=EST; length=598bp
GGAACATTAAACCAAAACCAAAAAAGACCTCGGGGAAAGAAGAAAAAGAA
AGGAATTGAATGGGGAACATGTATGAGTTCCGAACACAGGAGATTTGCTT
AGTATTACAAAGCAGCAGCAAGATAATATTCAAATTATTCATCCACTACC
AATAGAAGCAAACTTGAACAGGAGGGATAGTTTGCACTTTTCAACTCAAA
TTTAAGCTTGAGGCTTTTCCCACTTGAGGGGCTTCACAACTTCCCAAGTG
AAGTCTGGGTCATCCCTGCCAAAGTGTCCATAGGCAGCAGGCTTCAAGAA
CCTGCCATTACCGCCCCTTTTGAGATCCAAATTGATGGTCATCATTCCTG
GCCTGAAATCAGAGCTTTCCTTCACAATTTTGAGGATCTCCTTGTCAGGA
ATCTTGCCGGTTCCATATGAGTCCACAAAAAGAGACAATGGCTCAGGCAC
ACCTATGGCATACGAGACTTGGACAATGCACCTGGGAGCAAGCCCGCTTG
CAACAATGCTCTTAGCAGCCTGCCTAACAATGTATGCACCAGTCCTATCC
ACCTTAGGAGGGTCTTTTCCAAAGAAAGCACAGCCACCATGGGCTCCC
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