CF834295

Overview
NameCF834295
Unique NameCF834295
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length598
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF834295 vs. ExPASy Swiss-Prot
Match: METK_CHLSY (S-adenosylmethionine synthetase OS=Chloroflexus aurantiacus (strain ATCC 29364 / DSM 637 / Y-400-fl) GN=metK PE=3 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 4.305e-28
Identity = 67/117 (57.26%), Postives = 80/117 (68.38%), Query Frame = -2
Query:  241 HGGCAFFGKDPPKVDRTGAYIVRQAAKSIVASGLAPRCIVQVSYAIGVPEPLSLFVDSYGTGKIPDKEILKIVKESSDFRPGMMTINLDLKRGGNGRFLKPAAYGHFGRDDPDFTWE 591
            HGG AF GKDP KVDR+ AY  R  AK+IVA+GLA R  +QVSYAIGV  PLSL V+++GT  +PD+ ILK V E  D RPG +  +LDL+R     + K AA GHFGR D D  WE
Sbjct:  276 HGGGAFSGKDPSKVDRSAAYACRWVAKNIVAAGLARRVELQVSYAIGVARPLSLSVETFGTAAVPDEVILKAVNEVFDLRPGAIIRDLDLRR---PIYRKTAAGGHFGRTDIDLPWE 389          
BLAST of CF834295 vs. ExPASy Swiss-Prot
Match: METK_CHLAA (S-adenosylmethionine synthetase OS=Chloroflexus aurantiacus (strain ATCC 29366 / DSM 635 / J-10-fl) GN=metK PE=3 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 4.305e-28
Identity = 67/117 (57.26%), Postives = 80/117 (68.38%), Query Frame = -2
Query:  241 HGGCAFFGKDPPKVDRTGAYIVRQAAKSIVASGLAPRCIVQVSYAIGVPEPLSLFVDSYGTGKIPDKEILKIVKESSDFRPGMMTINLDLKRGGNGRFLKPAAYGHFGRDDPDFTWE 591
            HGG AF GKDP KVDR+ AY  R  AK+IVA+GLA R  +QVSYAIGV  PLSL V+++GT  +PD+ ILK V E  D RPG +  +LDL+R     + K AA GHFGR D D  WE
Sbjct:  276 HGGGAFSGKDPSKVDRSAAYACRWVAKNIVAAGLARRVELQVSYAIGVARPLSLSVETFGTAAVPDEVILKAVNEVFDLRPGAIIRDLDLRR---PIYRKTAAGGHFGRTDIDLPWE 389          
BLAST of CF834295 vs. ExPASy Swiss-Prot
Match: METK_THETN (S-adenosylmethionine synthetase OS=Thermoanaerobacter tengcongensis GN=metK PE=3 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 5.623e-28
Identity = 63/117 (53.85%), Postives = 83/117 (70.94%), Query Frame = -2
Query:  241 HGGCAFFGKDPPKVDRTGAYIVRQAAKSIVASGLAPRCIVQVSYAIGVPEPLSLFVDSYGTGKIPDKEILKIVKESSDFRPGMMTINLDLKRGGNGRFLKPAAYGHFGRDDPDFTWE 591
            HGG AF GKDP KVDR+ +Y  R  AK+IVA+GLA +C VQV+YAIGV  PL + ++++GTGKI D++I +IVK+  D RP  +  +LDL+R     + + AAYGHFGR D D  WE
Sbjct:  268 HGGGAFSGKDPTKVDRSASYAARYVAKNIVAAGLAKKCEVQVAYAIGVATPLEVEINTFGTGKISDEKISEIVKKVFDLRPAAIIRDLDLRR---PIYRQVAAYGHFGRHDLDLPWE 381          
BLAST of CF834295 vs. ExPASy Swiss-Prot
Match: METK_SYNY3 (S-adenosylmethionine synthetase OS=Synechocystis sp. (strain PCC 6803) GN=metK PE=3 SV=2)

HSP 1 Score: 124.02 bits (310), Expect = 5.623e-28
Identity = 68/139 (48.92%), Postives = 93/139 (66.91%), Query Frame = -2
Query:  205 HGGCAFFGKDPPKVDRTGAYIVRQAAKSIVASGLAPRCIVQVSYAIGVPEPLSLFVDSYGTGKIPDKEILKIVKESSDFRPG--MMTINL-DLKRGGNGRFLKP-AAYGHFGRDDPDFTWE------VVKPLKWEKPQA 591
            HGG AF GKDP KVDR+ AY  R  AK+IVA+GLA +C VQVSYAIGV  P+S+ +D++GTGK+ ++++L++V  + + RP   + ++NL +L     GRF +  AAYGHFGR+D D  WE      V+K      PQA
Sbjct:  285 HGGGAFSGKDPTKVDRSAAYAARYVAKNIVAAGLADKCEVQVSYAIGVARPVSVLIDTFGTGKVDEEKLLEVVLANFELRPAGIIQSLNLRNLPAERGGRFYQDVAAYGHFGRNDLDLPWEYTDKVDVLKAAFASSPQA 423          
BLAST of CF834295 vs. ExPASy Swiss-Prot
Match: METK_SYNJB (S-adenosylmethionine synthetase OS=Synechococcus sp. GN=metK PE=3 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 5.623e-28
Identity = 62/121 (51.24%), Postives = 82/121 (67.77%), Query Frame = -2
Query:  241 HGGCAFFGKDPPKVDRTGAYIVRQAAKSIVASGLAPRCIVQVSYAIGVPEPLSLFVDSYGTGKIPDKEILKIVKESSDFRPGMMTINLDLK---RGGNGRFLK-PAAYGHFGRDDPDFTWE 591
            HGG AF GKDP KVDR+ AY  R  AK+IVA+GLA +C VQVSYAIGV  P+++ V+++GTG+IPD+E+L++V+   D RP  +     L+   R   GRF +  A YGHFG+   D  WE
Sbjct:  273 HGGGAFSGKDPTKVDRSAAYAARYVAKNIVAAGLAQKCEVQVSYAIGVARPINILVETFGTGRIPDEELLRLVQRHFDLRPAAILAQFQLRELPRQRGGRFYQNVAVYGHFGQTHLDLPWE 393          
BLAST of CF834295 vs. ExPASy Swiss-Prot
Match: METK_RICPR (S-adenosylmethionine synthetase OS=Rickettsia prowazekii GN=metK PE=3 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 5.623e-28
Identity = 57/117 (48.72%), Postives = 81/117 (69.23%), Query Frame = -2
Query:  241 HGGCAFFGKDPPKVDRTGAYIVRQAAKSIVASGLAPRCIVQVSYAIGVPEPLSLFVDSYGTGKIPDKEILKIVKESSDFRPGMMTINLDLKRGGNGRFLKPAAYGHFGRDDPDFTWE 591
            HGG  F GKDP K+DR+ AY+ R  AK+IV +GLA RC +Q+SYAIGV +P+S++ +++GT K+ +++  K++ E  D RPG +  NL L       + K A YGHFGR+D +FTWE
Sbjct:  258 HGGGCFSGKDPTKIDRSAAYMARYIAKNIVGAGLADRCEIQISYAIGVADPVSVYAETFGTSKLSNEQTTKLITEHFDMRPGKIIKNLKLH---TQCYQKTATYGHFGREDENFTWE 371          
BLAST of CF834295 vs. ExPASy Swiss-Prot
Match: METK_RHOFD (S-adenosylmethionine synthetase OS=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) GN=metK PE=3 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 5.623e-28
Identity = 64/117 (54.70%), Postives = 83/117 (70.94%), Query Frame = -2
Query:  241 HGGCAFFGKDPPKVDRTGAYIVRQAAKSIVASGLAPRCIVQVSYAIGVPEPLSLFVDSYGTGKIPDKEILKIVKESSDFRPGMMTINLDLKRGGNGRFLKPAAYGHFGRDDPDFTWE 591
            HGG AF GKDP KVDR+ AY  R  AK+IVA+GLA +C +QV+YAIGV +P+++ V + GTG IPD +I ++V E  D RP  +   LDL R     + K AAYGHFGR++P+FTWE
Sbjct:  266 HGGGAFSGKDPSKVDRSAAYAARYVAKNIVAAGLARQCQIQVAYAIGVAKPMNVTVYTEGTGVIPDDKIAELVHELFDLRPKGIIQMLDLLR---PIYEKTAAYGHFGREEPEFTWE 379          
BLAST of CF834295 vs. ExPASy Swiss-Prot
Match: METK_PETMO (S-adenosylmethionine synthetase OS=Petrotoga mobilis (strain DSM 10674 / SJ95) GN=metK PE=3 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 5.623e-28
Identity = 61/123 (49.59%), Postives = 85/123 (69.11%), Query Frame = -2
Query:  223 HGGCAFFGKDPPKVDRTGAYIVRQAAKSIVASGLAPRCIVQVSYAIGVPEPLSLFVDSYGTGKIPDKEILKIVKESSDFRPGMMTINLDLKRGGNGRFLKPAAYGHFGRDDPDFTWEVVKPLK 591
            HGG AF GKDP KVDR+  Y+ R  AK++VASG A   ++Q+SYAIGV +P+S+ +D+ GT K+ +++I K+VKE  DFRP  +  NL+L +     + K AAYGHFGR D +F WE +  +K
Sbjct:  274 HGGGAFSGKDPTKVDRSATYMARYVAKNLVASGAADEVLIQLSYAIGVAQPVSINIDTKGTAKVDEEKIYKVVKEIFDFRPAAIISNLNLLQ---PIYQKTAAYGHFGRKDVEFPWERLDKVK 393          
BLAST of CF834295 vs. ExPASy Swiss-Prot
Match: METK_HAHCH (S-adenosylmethionine synthetase OS=Hahella chejuensis (strain KCTC 2396) GN=metK PE=3 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 5.623e-28
Identity = 65/117 (55.56%), Postives = 80/117 (68.38%), Query Frame = -2
Query:  241 HGGCAFFGKDPPKVDRTGAYIVRQAAKSIVASGLAPRCIVQVSYAIGVPEPLSLFVDSYGTGKIPDKEILKIVKESSDFRPGMMTINLDLKRGGNGRFLKPAAYGHFGRDDPDFTWE 591
            HGG AF GKDP KVDR+ AY  R  AK+IVASGLA +C +QVSYAIGV EP S+ V+++GTGKI D +I  +V+E  D RP  +   LDLKR     +   A+YGHFGR    F+WE
Sbjct:  259 HGGGAFSGKDPSKVDRSAAYAGRYVAKNIVASGLAAKCEIQVSYAIGVSEPTSISVNTFGTGKISDDKIATLVREHFDLRPRGLIDMLDLKR---PIYRPTASYGHFGRTGDSFSWE 372          
BLAST of CF834295 vs. ExPASy Swiss-Prot
Match: METK_GEOSW (S-adenosylmethionine synthetase OS=Geobacillus sp. (strain WCH70) GN=metK PE=3 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 5.623e-28
Identity = 63/129 (48.84%), Postives = 86/129 (66.67%), Query Frame = -2
Query:  205 HGGCAFFGKDPPKVDRTGAYIVRQAAKSIVASGLAPRCIVQVSYAIGVPEPLSLFVDSYGTGKIPDKEILKIVKESSDFRPGMMTINLDLKRGGNGRFLKPAAYGHFGRDDPDFTWEVVKPLKWEKPQA 591
            HGG AF GKDP KVDR+ AY  R  AK+IVASGLA +C VQ++YAIGV  P+S+ +D++GTGK+ +  ++++V+ + D RP  +   LDL+R     + + AAYGHFGR D D  WE     +  K QA
Sbjct:  272 HGGGAFSGKDPTKVDRSAAYAARYVAKNIVASGLADKCEVQLAYAIGVARPVSISIDTFGTGKVSEDILIEVVRNNFDLRPAGIIKMLDLRR---PIYKQTAAYGHFGRTDIDLPWERTDKAETLKEQA 397          
The following BLAST results are available for this feature:
BLAST of CF834295 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK_CHLSY4.305e-2857.26S-adenosylmethionine synthetase OS=Chloroflexus au... [more]
METK_CHLAA4.305e-2857.26S-adenosylmethionine synthetase OS=Chloroflexus au... [more]
METK_THETN5.623e-2853.85S-adenosylmethionine synthetase OS=Thermoanaerobac... [more]
METK_SYNY35.623e-2848.92S-adenosylmethionine synthetase OS=Synechocystis s... [more]
METK_SYNJB5.623e-2851.24S-adenosylmethionine synthetase OS=Synechococcus s... [more]
METK_RICPR5.623e-2848.72S-adenosylmethionine synthetase OS=Rickettsia prow... [more]
METK_RHOFD5.623e-2854.70S-adenosylmethionine synthetase OS=Rhodoferax ferr... [more]
METK_PETMO5.623e-2849.59S-adenosylmethionine synthetase OS=Petrotoga mobil... [more]
METK_HAHCH5.623e-2855.56S-adenosylmethionine synthetase OS=Hahella chejuen... [more]
METK_GEOSW5.623e-2848.84S-adenosylmethionine synthetase OS=Geobacillus sp.... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_05E14_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa05E14, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF834295 ID=CF834295; Name=CF834295; organism=Citrus sinensis; type=EST; length=598bp
GGAACATTAAACCAAAACCAAAAAAGACCTCGGGGAAAGAAGAAAAAGAA
AGGAATTGAATGGGGAACATGTATGAGTTCCGAACACAGGAGATTTGCTT
AGTATTACAAAGCAGCAGCAAGATAATATTCAAATTATTCATCCACTACC
AATAGAAGCAAACTTGAACAGGAGGGATAGTTTGCACTTTTCAACTCAAA
TTTAAGCTTGAGGCTTTTCCCACTTGAGGGGCTTCACAACTTCCCAAGTG
AAGTCTGGGTCATCCCTGCCAAAGTGTCCATAGGCAGCAGGCTTCAAGAA
CCTGCCATTACCGCCCCTTTTGAGATCCAAATTGATGGTCATCATTCCTG
GCCTGAAATCAGAGCTTTCCTTCACAATTTTGAGGATCTCCTTGTCAGGA
ATCTTGCCGGTTCCATATGAGTCCACAAAAAGAGACAATGGCTCAGGCAC
ACCTATGGCATACGAGACTTGGACAATGCACCTGGGAGCAAGCCCGCTTG
CAACAATGCTCTTAGCAGCCTGCCTAACAATGTATGCACCAGTCCTATCC
ACCTTAGGAGGGTCTTTTCCAAAGAAAGCACAGCCACCATGGGCTCCC
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