CF834295
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF834295 vs. ExPASy Swiss-Prot
Match: METK_SHESR (S-adenosylmethionine synthetase OS=Shewanella sp. (strain MR-7) GN=metK PE=3 SV=1) HSP 1 Score: 120.168 bits (300), Expect = 8.120e-27 Identity = 62/117 (52.99%), Postives = 83/117 (70.94%), Query Frame = -2 Query: 241 HGGCAFFGKDPPKVDRTGAYIVRQAAKSIVASGLAPRCIVQVSYAIGVPEPLSLFVDSYGTGKIPDKEILKIVKESSDFRPGMMTINLDLKRGGNGRFLKPAAYGHFGRDDPDFTWE 591 HGG AF GKDP KVDR+ AY R AK+IVA+GLA RC +QVSYAIGV EP S+ V+++GTGK+ ++ ++K+V++ D RP +T L+L R + AAYGHFGR+ +F WE Sbjct: 258 HGGGAFSGKDPSKVDRSAAYAARYVAKNIVAAGLADRCEIQVSYAIGVAEPTSISVETFGTGKVSEEVLIKLVRQHFDLRPYGLTEMLNLAR---PIYQATAAYGHFGRN--EFPWE 369
BLAST of CF834295 vs. ExPASy Swiss-Prot
Match: METK_SHESM (S-adenosylmethionine synthetase OS=Shewanella sp. (strain MR-4) GN=metK PE=3 SV=1) HSP 1 Score: 120.168 bits (300), Expect = 8.120e-27 Identity = 62/117 (52.99%), Postives = 83/117 (70.94%), Query Frame = -2 Query: 241 HGGCAFFGKDPPKVDRTGAYIVRQAAKSIVASGLAPRCIVQVSYAIGVPEPLSLFVDSYGTGKIPDKEILKIVKESSDFRPGMMTINLDLKRGGNGRFLKPAAYGHFGRDDPDFTWE 591 HGG AF GKDP KVDR+ AY R AK+IVA+GLA RC +QVSYAIGV EP S+ V+++GTGK+ ++ ++K+V++ D RP +T L+L R + AAYGHFGR+ +F WE Sbjct: 258 HGGGAFSGKDPSKVDRSAAYAARYVAKNIVAAGLADRCEIQVSYAIGVAEPTSISVETFGTGKVSEEVLIKLVRQHFDLRPYGLTEMLNLAR---PIYQATAAYGHFGRN--EFPWE 369
BLAST of CF834295 vs. ExPASy Swiss-Prot
Match: METK_SHESA (S-adenosylmethionine synthetase OS=Shewanella sp. (strain ANA-3) GN=metK PE=3 SV=1) HSP 1 Score: 120.168 bits (300), Expect = 8.120e-27 Identity = 62/117 (52.99%), Postives = 83/117 (70.94%), Query Frame = -2 Query: 241 HGGCAFFGKDPPKVDRTGAYIVRQAAKSIVASGLAPRCIVQVSYAIGVPEPLSLFVDSYGTGKIPDKEILKIVKESSDFRPGMMTINLDLKRGGNGRFLKPAAYGHFGRDDPDFTWE 591 HGG AF GKDP KVDR+ AY R AK+IVA+GLA RC +QVSYAIGV EP S+ V+++GTGK+ ++ ++K+V++ D RP +T L+L R + AAYGHFGR+ +F WE Sbjct: 258 HGGGAFSGKDPSKVDRSAAYAARYVAKNIVAAGLADRCEIQVSYAIGVAEPTSISVETFGTGKVSEEVLIKLVRQHFDLRPYGLTEMLNLAR---PIYQATAAYGHFGRN--EFPWE 369
BLAST of CF834295 vs. ExPASy Swiss-Prot
Match: METK_PSEFS (S-adenosylmethionine synthetase OS=Pseudomonas fluorescens (strain SBW25) GN=metK PE=3 SV=1) HSP 1 Score: 120.168 bits (300), Expect = 8.120e-27 Identity = 67/127 (52.76%), Postives = 85/127 (66.93%), Query Frame = -2 Query: 241 HGGCAFFGKDPPKVDRTGAYIVRQAAKSIVASGLAPRCIVQVSYAIGVPEPLSLFVDSYGTGKIPDKEILKIVKESSDFRPGMMTINLDLKRGGNGRFLKPAAYGHFGR--------DD--PDFTWE 591 HGG AF GKDP KVDR+ AY R AK+IVA+GLA RC +QVSYAIGV +P S+ ++++GTGKI D +I+K+V+E D RP +T LDL + + + AAYGHFGR DD FTWE Sbjct: 259 HGGGAFSGKDPSKVDRSAAYAGRYVAKNIVAAGLAERCEIQVSYAIGVAQPTSISLNTFGTGKISDDKIVKLVREIFDLRPYAITTMLDLL---HPMYQETAAYGHFGRTPAQKTVGDDTFTTFTWE 382
BLAST of CF834295 vs. ExPASy Swiss-Prot
Match: METK_CLOBB (S-adenosylmethionine synthetase OS=Clostridium botulinum (strain Eklund 17B / Type B) GN=metK PE=3 SV=1) HSP 1 Score: 120.168 bits (300), Expect = 8.120e-27 Identity = 58/119 (48.74%), Postives = 85/119 (71.43%), Query Frame = -2 Query: 241 GAHGGCAFFGKDPPKVDRTGAYIVRQAAKSIVASGLAPRCIVQVSYAIGVPEPLSLFVDSYGTGKIPDKEILKIVKESSDFRPGMMTINLDLKRGGNGRFLKPAAYGHFGRDDPDFTWE 597 G HGG AF GKD KVDR+ AY R AK++VA+G+A + +Q++YAIGV +P+S+ ++++GTGK+P+ +I++IV+ D RPG + +LDL++ F + AAYGHFGR D D WE Sbjct: 264 GRHGGGAFSGKDSTKVDRSAAYAARWVAKNLVAAGIADKLEIQLAYAIGVAKPVSIEIETFGTGKMPEDKIVEIVENVFDLRPGAIIRDLDLRK---PIFKQTAAYGHFGRTDLDLPWE 379
BLAST of CF834295 vs. ExPASy Swiss-Prot
Match: METK_ALTMD (S-adenosylmethionine synthetase OS=Alteromonas macleodii (strain DSM 17117 / Deep ecotype) GN=metK PE=3 SV=1) HSP 1 Score: 120.168 bits (300), Expect = 8.120e-27 Identity = 63/117 (53.85%), Postives = 81/117 (69.23%), Query Frame = -2 Query: 241 HGGCAFFGKDPPKVDRTGAYIVRQAAKSIVASGLAPRCIVQVSYAIGVPEPLSLFVDSYGTGKIPDKEILKIVKESSDFRPGMMTINLDLKRGGNGRFLKPAAYGHFGRDDPDFTWE 591 HGG AF GKDP KVDR+ AY R AK+IVA+GLA RC +QVSYAIGV EP S+ +D++GTG + +K ++ +V+E D RP + LDL+R + AAYGHFGRD +F WE Sbjct: 258 HGGGAFSGKDPSKVDRSAAYAGRYVAKNIVAAGLAKRCEIQVSYAIGVAEPTSISIDTFGTGVVDEKTLVALVREHFDLRPYGLIQMLDLER---PIYRPTAAYGHFGRD--EFPWE 369
BLAST of CF834295 vs. ExPASy Swiss-Prot
Match: METK_ACAM1 (S-adenosylmethionine synthetase OS=Acaryochloris marina (strain MBIC 11017) GN=metK PE=3 SV=1) HSP 1 Score: 120.168 bits (300), Expect = 8.120e-27 Identity = 62/121 (51.24%), Postives = 83/121 (68.60%), Query Frame = -2 Query: 241 HGGCAFFGKDPPKVDRTGAYIVRQAAKSIVASGLAPRCIVQVSYAIGVPEPLSLFVDSYGTGKIPDKEILKIVKESSDFRPG--MMTINLDLKRG-GNGRFLKP-AAYGHFGRDDPDFTWE 591 HGG AF GKDP KVDR+ AY R AK+IVA+GLA +C VQ+SYAIGV P+S+ ++++GTGK+ + +L++V+E+ + RP + T L G GRF + AAYGHFGR D D WE Sbjct: 278 HGGGAFSGKDPTKVDRSAAYACRYVAKNIVAAGLAEKCEVQLSYAIGVARPVSILIETFGTGKVDEDRLLQVVQENFELRPAGLIQTFGLTKLPGERGGRFYQDVAAYGHFGRTDLDLPWE 398
BLAST of CF834295 vs. ExPASy Swiss-Prot
Match: METK1_RAT (S-adenosylmethionine synthetase isoform type-1 OS=Rattus norvegicus GN=Mat1a PE=1 SV=2) HSP 1 Score: 120.168 bits (300), Expect = 8.120e-27 Identity = 66/125 (52.80%), Postives = 86/125 (68.80%), Query Frame = -2 Query: 226 GAHGGCAFFGKDPPKVDRTGAYIVRQAAKSIVASGLAPRCIVQVSYAIGVPEPLSLFVDSYGTGKIPDK-EILKIVKESSDFRPGMMTINLDLKRGGNGRFLKPAAYGHFGRDDPDFTWEVVKPL 597 GAHGG AF GKD KVDR+ AY R AKS+V +GL R +VQVSYAIGV EPLS+ + +YGT K ++ E+L++V ++ D RPG++ +LDLK+ + K A YGHFGR +F WEV K L Sbjct: 276 GAHGGGAFSGKDYTKVDRSAAYAARWVAKSLVKAGLCRRVLVQVSYAIGVAEPLSISIFTYGTSKKTERDELLEVVNKNFDLRPGVIVRDLDLKK---PIYQKTACYGHFGRS--EFPWEVPKKL 395
BLAST of CF834295 vs. ExPASy Swiss-Prot
Match: METK_XANOR (S-adenosylmethionine synthetase OS=Xanthomonas oryzae pv. oryzae GN=metK PE=3 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 1.060e-26 Identity = 62/116 (53.45%), Postives = 81/116 (69.83%), Query Frame = -2 Query: 244 HGGCAFFGKDPPKVDRTGAYIVRQAAKSIVASGLAPRCIVQVSYAIGVPEPLSLFVDSYGTGKIPDKEILKIVKESSDFRPGMMTINLDLKRGGNGRFLKPAAYGHFGRDDPDFTW 591 HGG AF GKDP KVDR+ AY R AK++VA+GLA RC VQVSYAIGV EP S+ V ++GTGKI D++I K++++ D RP + LDL + + + A+YGHFGR DFT+ Sbjct: 260 HGGGAFSGKDPSKVDRSAAYAARYVAKNVVAAGLADRCEVQVSYAIGVAEPTSISVTTFGTGKIADEQIEKLIRKHFDLRPFGIIQMLDLI---HPMYQQTASYGHFGRKPKDFTY 372
BLAST of CF834295 vs. ExPASy Swiss-Prot
Match: METK_XANOP (S-adenosylmethionine synthetase OS=Xanthomonas oryzae pv. oryzae (strain PXO99A) GN=metK PE=3 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 1.060e-26 Identity = 62/116 (53.45%), Postives = 81/116 (69.83%), Query Frame = -2 Query: 244 HGGCAFFGKDPPKVDRTGAYIVRQAAKSIVASGLAPRCIVQVSYAIGVPEPLSLFVDSYGTGKIPDKEILKIVKESSDFRPGMMTINLDLKRGGNGRFLKPAAYGHFGRDDPDFTW 591 HGG AF GKDP KVDR+ AY R AK++VA+GLA RC VQVSYAIGV EP S+ V ++GTGKI D++I K++++ D RP + LDL + + + A+YGHFGR DFT+ Sbjct: 260 HGGGAFSGKDPSKVDRSAAYAARYVAKNVVAAGLADRCEVQVSYAIGVAEPTSISVTTFGTGKIADEQIEKLIRKHFDLRPFGIIQMLDLI---HPMYQQTASYGHFGRKPKDFTY 372 The following BLAST results are available for this feature:
BLAST of CF834295 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CF834295 ID=CF834295; Name=CF834295; organism=Citrus sinensis; type=EST; length=598bpback to top |