CF834295

Overview
NameCF834295
Unique NameCF834295
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length598
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CF834295 vs. ExPASy Swiss-Prot
Match: METK_STAAU (S-adenosylmethionine synthetase OS=Staphylococcus aureus GN=metK PE=3 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 1.385e-26
Identity = 59/117 (50.43%), Postives = 82/117 (70.09%), Query Frame = -2 
Query:  241 HGGCAFFGKDPPKVDRTGAYIVRQAAKSIVASGLAPRCIVQVSYAIGVPEPLSLFVDSYGTGKIPDKEILKIVKESSDFRPGMMTINLDLKRGGNGRFLKPAAYGHFGRDDPDFTWE 591
            HGG  F GKDP KVDR+ AY  R  AK+IVA+GLA +C VQ++YAIGV EP+S+ +D++GTGK+ + ++++ V++  D RP  +   LDLK+     + + AAYGHFGR D  F WE
Sbjct:  271 HGGGCFSGKDPTKVDRSAAYAARYVAKNIVAAGLADQCEVQLAYAIGVAEPVSIAIDTFGTGKVSEGQLVEAVRKHFDLRPAGIIKMLDLKQ---PIYKQTAAYGHFGRTDVLFPWE 384
[Close]
BLAST of CF834295 vs. ExPASy Swiss-Prot
Match: METK_STAAT (S-adenosylmethionine synthetase OS=Staphylococcus aureus (strain USA300 / TCH1516) GN=metK PE=3 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 1.385e-26
Identity = 59/117 (50.43%), Postives = 82/117 (70.09%), Query Frame = -2 
Query:  241 HGGCAFFGKDPPKVDRTGAYIVRQAAKSIVASGLAPRCIVQVSYAIGVPEPLSLFVDSYGTGKIPDKEILKIVKESSDFRPGMMTINLDLKRGGNGRFLKPAAYGHFGRDDPDFTWE 591
            HGG  F GKDP KVDR+ AY  R  AK+IVA+GLA +C VQ++YAIGV EP+S+ +D++GTGK+ + ++++ V++  D RP  +   LDLK+     + + AAYGHFGR D  F WE
Sbjct:  271 HGGGCFSGKDPTKVDRSAAYAARYVAKNIVAAGLADQCEVQLAYAIGVAEPVSIAIDTFGTGKVSEGQLVEAVRKHFDLRPAGIIKMLDLKQ---PIYKQTAAYGHFGRTDVLFPWE 384
[Close]
BLAST of CF834295 vs. ExPASy Swiss-Prot
Match: METK_STAAS (S-adenosylmethionine synthetase OS=Staphylococcus aureus (strain MSSA476) GN=metK PE=3 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 1.385e-26
Identity = 59/117 (50.43%), Postives = 82/117 (70.09%), Query Frame = -2 
Query:  241 HGGCAFFGKDPPKVDRTGAYIVRQAAKSIVASGLAPRCIVQVSYAIGVPEPLSLFVDSYGTGKIPDKEILKIVKESSDFRPGMMTINLDLKRGGNGRFLKPAAYGHFGRDDPDFTWE 591
            HGG  F GKDP KVDR+ AY  R  AK+IVA+GLA +C VQ++YAIGV EP+S+ +D++GTGK+ + ++++ V++  D RP  +   LDLK+     + + AAYGHFGR D  F WE
Sbjct:  271 HGGGCFSGKDPTKVDRSAAYAARYVAKNIVAAGLADQCEVQLAYAIGVAEPVSIAIDTFGTGKVSEGQLVEAVRKHFDLRPAGIIKMLDLKQ---PIYKQTAAYGHFGRTDVLFPWE 384
[Close]
BLAST of CF834295 vs. ExPASy Swiss-Prot
Match: METK_STAAR (S-adenosylmethionine synthetase OS=Staphylococcus aureus (strain MRSA252) GN=metK PE=3 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 1.385e-26
Identity = 59/117 (50.43%), Postives = 82/117 (70.09%), Query Frame = -2 
Query:  241 HGGCAFFGKDPPKVDRTGAYIVRQAAKSIVASGLAPRCIVQVSYAIGVPEPLSLFVDSYGTGKIPDKEILKIVKESSDFRPGMMTINLDLKRGGNGRFLKPAAYGHFGRDDPDFTWE 591
            HGG  F GKDP KVDR+ AY  R  AK+IVA+GLA +C VQ++YAIGV EP+S+ +D++GTGK+ + ++++ V++  D RP  +   LDLK+     + + AAYGHFGR D  F WE
Sbjct:  271 HGGGCFSGKDPTKVDRSAAYAARYVAKNIVAAGLADQCEVQLAYAIGVAEPVSIAIDTFGTGKVSEGQLVEAVRKHFDLRPAGIIKMLDLKQ---PIYKQTAAYGHFGRTDVLFPWE 384
[Close]
BLAST of CF834295 vs. ExPASy Swiss-Prot
Match: METK_STAAN (S-adenosylmethionine synthetase OS=Staphylococcus aureus (strain N315) GN=metK PE=1 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 1.385e-26
Identity = 59/117 (50.43%), Postives = 82/117 (70.09%), Query Frame = -2 
Query:  241 HGGCAFFGKDPPKVDRTGAYIVRQAAKSIVASGLAPRCIVQVSYAIGVPEPLSLFVDSYGTGKIPDKEILKIVKESSDFRPGMMTINLDLKRGGNGRFLKPAAYGHFGRDDPDFTWE 591
            HGG  F GKDP KVDR+ AY  R  AK+IVA+GLA +C VQ++YAIGV EP+S+ +D++GTGK+ + ++++ V++  D RP  +   LDLK+     + + AAYGHFGR D  F WE
Sbjct:  271 HGGGCFSGKDPTKVDRSAAYAARYVAKNIVAAGLADQCEVQLAYAIGVAEPVSIAIDTFGTGKVSEGQLVEAVRKHFDLRPAGIIKMLDLKQ---PIYKQTAAYGHFGRTDVLFPWE 384
[Close]
BLAST of CF834295 vs. ExPASy Swiss-Prot
Match: METK_STAAM (S-adenosylmethionine synthetase OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=metK PE=1 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 1.385e-26
Identity = 59/117 (50.43%), Postives = 82/117 (70.09%), Query Frame = -2 
Query:  241 HGGCAFFGKDPPKVDRTGAYIVRQAAKSIVASGLAPRCIVQVSYAIGVPEPLSLFVDSYGTGKIPDKEILKIVKESSDFRPGMMTINLDLKRGGNGRFLKPAAYGHFGRDDPDFTWE 591
            HGG  F GKDP KVDR+ AY  R  AK+IVA+GLA +C VQ++YAIGV EP+S+ +D++GTGK+ + ++++ V++  D RP  +   LDLK+     + + AAYGHFGR D  F WE
Sbjct:  271 HGGGCFSGKDPTKVDRSAAYAARYVAKNIVAAGLADQCEVQLAYAIGVAEPVSIAIDTFGTGKVSEGQLVEAVRKHFDLRPAGIIKMLDLKQ---PIYKQTAAYGHFGRTDVLFPWE 384
[Close]
BLAST of CF834295 vs. ExPASy Swiss-Prot
Match: METK_STAAE (S-adenosylmethionine synthetase OS=Staphylococcus aureus (strain Newman) GN=metK PE=3 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 1.385e-26
Identity = 59/117 (50.43%), Postives = 82/117 (70.09%), Query Frame = -2 
Query:  241 HGGCAFFGKDPPKVDRTGAYIVRQAAKSIVASGLAPRCIVQVSYAIGVPEPLSLFVDSYGTGKIPDKEILKIVKESSDFRPGMMTINLDLKRGGNGRFLKPAAYGHFGRDDPDFTWE 591
            HGG  F GKDP KVDR+ AY  R  AK+IVA+GLA +C VQ++YAIGV EP+S+ +D++GTGK+ + ++++ V++  D RP  +   LDLK+     + + AAYGHFGR D  F WE
Sbjct:  271 HGGGCFSGKDPTKVDRSAAYAARYVAKNIVAAGLADQCEVQLAYAIGVAEPVSIAIDTFGTGKVSEGQLVEAVRKHFDLRPAGIIKMLDLKQ---PIYKQTAAYGHFGRTDVLFPWE 384
[Close]
BLAST of CF834295 vs. ExPASy Swiss-Prot
Match: METK_STAAC (S-adenosylmethionine synthetase OS=Staphylococcus aureus (strain COL) GN=metK PE=3 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 1.385e-26
Identity = 59/117 (50.43%), Postives = 82/117 (70.09%), Query Frame = -2 
Query:  241 HGGCAFFGKDPPKVDRTGAYIVRQAAKSIVASGLAPRCIVQVSYAIGVPEPLSLFVDSYGTGKIPDKEILKIVKESSDFRPGMMTINLDLKRGGNGRFLKPAAYGHFGRDDPDFTWE 591
            HGG  F GKDP KVDR+ AY  R  AK+IVA+GLA +C VQ++YAIGV EP+S+ +D++GTGK+ + ++++ V++  D RP  +   LDLK+     + + AAYGHFGR D  F WE
Sbjct:  271 HGGGCFSGKDPTKVDRSAAYAARYVAKNIVAAGLADQCEVQLAYAIGVAEPVSIAIDTFGTGKVSEGQLVEAVRKHFDLRPAGIIKMLDLKQ---PIYKQTAAYGHFGRTDVLFPWE 384
[Close]
BLAST of CF834295 vs. ExPASy Swiss-Prot
Match: METK_STAAB (S-adenosylmethionine synthetase OS=Staphylococcus aureus (strain bovine RF122 / ET3-1) GN=metK PE=3 SV=2)

HSP 1 Score: 119.398 bits (298), Expect = 1.385e-26
Identity = 59/117 (50.43%), Postives = 82/117 (70.09%), Query Frame = -2 
Query:  241 HGGCAFFGKDPPKVDRTGAYIVRQAAKSIVASGLAPRCIVQVSYAIGVPEPLSLFVDSYGTGKIPDKEILKIVKESSDFRPGMMTINLDLKRGGNGRFLKPAAYGHFGRDDPDFTWE 591
            HGG  F GKDP KVDR+ AY  R  AK+IVA+GLA +C VQ++YAIGV EP+S+ +D++GTGK+ + ++++ V++  D RP  +   LDLK+     + + AAYGHFGR D  F WE
Sbjct:  271 HGGGCFSGKDPTKVDRSAAYAARYVAKNIVAAGLADQCEVQLAYAIGVAEPVSIAIDTFGTGKVSEGQLVEAVRKHFDLRPAGIIKMLDLKQ---PIYKQTAAYGHFGRTDVLFPWE 384
[Close]
BLAST of CF834295 vs. ExPASy Swiss-Prot
Match: METK_STAA9 (S-adenosylmethionine synthetase OS=Staphylococcus aureus (strain JH9) GN=metK PE=3 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 1.385e-26
Identity = 59/117 (50.43%), Postives = 82/117 (70.09%), Query Frame = -2 
Query:  241 HGGCAFFGKDPPKVDRTGAYIVRQAAKSIVASGLAPRCIVQVSYAIGVPEPLSLFVDSYGTGKIPDKEILKIVKESSDFRPGMMTINLDLKRGGNGRFLKPAAYGHFGRDDPDFTWE 591
            HGG  F GKDP KVDR+ AY  R  AK+IVA+GLA +C VQ++YAIGV EP+S+ +D++GTGK+ + ++++ V++  D RP  +   LDLK+     + + AAYGHFGR D  F WE
Sbjct:  271 HGGGCFSGKDPTKVDRSAAYAARYVAKNIVAAGLADQCEVQLAYAIGVAEPVSIAIDTFGTGKVSEGQLVEAVRKHFDLRPAGIIKMLDLKQ---PIYKQTAAYGHFGRTDVLFPWE 384
The following BLAST results are available for this feature:
BLAST of CF834295 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK_STAAU1.385e-2650.43S-adenosylmethionine synthetase OS=Staphylococcus ... [more]
METK_STAAT1.385e-2650.43S-adenosylmethionine synthetase OS=Staphylococcus ... [more]
METK_STAAS1.385e-2650.43S-adenosylmethionine synthetase OS=Staphylococcus ... [more]
METK_STAAR1.385e-2650.43S-adenosylmethionine synthetase OS=Staphylococcus ... [more]
METK_STAAN1.385e-2650.43S-adenosylmethionine synthetase OS=Staphylococcus ... [more]
METK_STAAM1.385e-2650.43S-adenosylmethionine synthetase OS=Staphylococcus ... [more]
METK_STAAE1.385e-2650.43S-adenosylmethionine synthetase OS=Staphylococcus ... [more]
METK_STAAC1.385e-2650.43S-adenosylmethionine synthetase OS=Staphylococcus ... [more]
METK_STAAB1.385e-2650.43S-adenosylmethionine synthetase OS=Staphylococcus ... [more]
METK_STAA91.385e-2650.43S-adenosylmethionine synthetase OS=Staphylococcus ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_05E14_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa05E14, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF834295 ID=CF834295; Name=CF834295; organism=Citrus sinensis; type=EST; length=598bp
GGAACATTAAACCAAAACCAAAAAAGACCTCGGGGAAAGAAGAAAAAGAA
AGGAATTGAATGGGGAACATGTATGAGTTCCGAACACAGGAGATTTGCTT
AGTATTACAAAGCAGCAGCAAGATAATATTCAAATTATTCATCCACTACC
AATAGAAGCAAACTTGAACAGGAGGGATAGTTTGCACTTTTCAACTCAAA
TTTAAGCTTGAGGCTTTTCCCACTTGAGGGGCTTCACAACTTCCCAAGTG
AAGTCTGGGTCATCCCTGCCAAAGTGTCCATAGGCAGCAGGCTTCAAGAA
CCTGCCATTACCGCCCCTTTTGAGATCCAAATTGATGGTCATCATTCCTG
GCCTGAAATCAGAGCTTTCCTTCACAATTTTGAGGATCTCCTTGTCAGGA
ATCTTGCCGGTTCCATATGAGTCCACAAAAAGAGACAATGGCTCAGGCAC
ACCTATGGCATACGAGACTTGGACAATGCACCTGGGAGCAAGCCCGCTTG
CAACAATGCTCTTAGCAGCCTGCCTAACAATGTATGCACCAGTCCTATCC
ACCTTAGGAGGGTCTTTTCCAAAGAAAGCACAGCCACCATGGGCTCCC
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